Littorina saxatilis: 138966881
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Entry
138966881 CDS
T10665
Name
(RefSeq) protein patched homolog 1-like isoform X1
KO
K06225
patched 1
Organism
lsax Littorina saxatilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
MoeA_C
Motif
Other DBs
NCBI-GeneID:
138966881
NCBI-ProteinID:
XP_070195366
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Position
LG5:31764276..31842558
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AA seq
1351 aa
AA seq
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MTSATRRDFTPKSDPELLTRTSWVNAATAYRQVKRGRADGNTCALWLRLHLQRHLYSLGC
FLQLHCGKVLFLGLLFLSLCCVGLKTAHIETNVEELWVEAGGRLEKELKYTRRVLGAGSG
STYEQIIQTPKEAKNLLNMDSIRLHLDSVYEATQVQVQIDGITWKFRDICYAASFPEMEH
PILDRILPYLLPCVIITPIDCFWEGSLLLGPDYPIDTGGINGIPETLTWANLNPVDIVAG
LVSHPKTLDIGKQLEDIMNASGIGTGYQLKPCLNPHDPECPVTAPNKHSKQLPDLGGTLT
NGCTGFSSKYMQWPEDLLFGGVMKNKTGHISRIEAYQSVLQLMGEQDIFEYWKDTMKTSG
TNWDKDAARLVLETWQRKFVTLVNDINNATTRDNINAFSFTSLMDIMKDFSNISLTRIVI
GYVLMLIYACISLMRWNDAVNSQSGIGMAGVMLVSLSVAAGLGICSVLGITFNASTTQII
PFLALGLGVDDMFLIAHTYSETSKHIPCSQELSGEVLKRTGVTVLLTSLTNMLAFFTAAI
IPIPALRAFSLQAGLLVLFNMGSVLIVFPAIVSLDLVRRDDNRIDVLCCFQSAGPSNQVL
ELQHQSREDSQHENSPPPSYTPPPSYSASYSSVPLHQTVTHTSSDGSGTVTSLAESDGRY
VRRGTREGSAGGVSTTSSQQCLTPEDGLTCGDHCAHARKECMTVSLTCFALRLYTFLLEH
TFVKVTVVVSFVVLLIVGAWGVAQVRDGLDLTDIVPRDTPEFSFLEAQAQYFGFYSVYAV
TKKDFDYPRNQKLLHEYNHAFQRVDRISKHQDGSVPTFWLEIFRTWLKNLQRSFDRDVAR
GIITKDGWNYTHASDDGILAYKLLAQTGDSDRFYEKSKVMTSRLVDSNGIINPDAFYNYL
SAWYTNDAIAYSASMGNIHPLPHDWLHDPQDNDFKVLKSRPIEYAQIPFFLTNLNNTEEI
ISTVKDFRAVCDEFVDRGLPNYPSGYPFTYWEQYINLRFYLMLALLCVLTTTFLVLTITL
MNPWLAAVVVLVLAMILVELFGFMGIVGIKLSAVPAVILIMTVGIGVEFTLHVAVGFVTS
IGSRNRRVMMATEHTFAPVVHGATSTFLGIIMLVSTEFDFIIKYFFNVLAALVVIGILNG
LLLLPILLSFLGPKGEVIPKENPDCLSTPTPEPSPRMGRDQRHHHHHIRTSSSSSSSSRG
RRVYPRRNSDISLSTITEEPTQYSSHEIIVQPEVVVETTTIPSSGATSEGGGGGGDWGGG
KRRSSGNDSDDSSCDSSKSFPVTIHVPTTSGGQTSTVTRVKATATVKVEVHTPIPGGAVS
QEHSYKSKRRKMRQLKERESHGRRHYSDSEC
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgctacacgaagggatttcaccccaaagtccgaccccgaattactgaccagg
accagctgggtgaatgctgcaacggcctacagacaagtgaaacggggccgggctgatggg
aacacgtgtgctttgtggttgcggttacacttacaaagacatctgtacagtttaggatgc
tttttacagttacattgtgggaaagtgctgttccttggattattattcctctccttgtgt
tgtgtcggattaaaaactgcacatattgagaccaacgtggaagagctctgggtggaagcg
gggggtcggttggaaaaagagttgaaatacacacggagggtgttaggggcggggagcggt
tcaacgtatgaacaaatcattcagacccccaaagaggcgaaaaatttgttgaacatggac
tccatacggttacacttggattccgtgtacgaggctacgcaagtacaagtgcaaatagat
ggaataacgtggaaatttcgggacatttgttacgccgcaagctttccagagatggaacat
cccattttggatcgaattttgccatacttgttaccatgtgtgataattacacccatcgac
tgtttctgggaggggagtttactgctaggaccagactaccccatcgatactggtggtatt
aacggaatcccagaaacgttgacctgggccaacctgaacccggtggacattgtggccggc
ttggtcagtcacccgaaaacgctggacattggcaaacagctggaggacatcatgaatgct
tctggcattgggacgggataccagctcaagccatgtctcaatccacacgaccccgagtgt
ccggtcactgcccccaacaaacacagcaagcagctgccagacctgggcggaaccctgacg
aacgggtgtacagggttctccagcaaatacatgcagtggccggaggatctgctgttcggg
ggagtcatgaagaacaagactggacacatcagcaggattgaggcctaccagtcagtgctg
cagctgatgggcgagcaggacatcttcgagtactggaaggacaccatgaagacctcgggg
accaactgggacaaggatgccgccaggctggtgctggagacatggcagagaaagtttgtc
actcttgtgaatgacataaacaacgccacaacgagagacaacatcaacgccttctccttc
acctccctcatggacatcatgaaggacttctccaacatctctctgaccaggatcgtcatt
ggatacgtccttatgttgatctatgcgtgcatctcactgatgcgatggaacgatgcggtg
aactctcagagtgggatcggcatggccggtgtcatgttggtgtctctgtccgtggccgct
gggctcggcatctgttctgtccttggcatcaccttcaacgcctccaccacacagatcatc
ccatttcttgcccttggtctgggtgtggatgatatgtttctgattgctcacacctactcg
gaaactagtaaacacatcccttgttcgcaggagttgtctggcgaggtgctgaagcggaca
ggggtgacggtgctactgacctcgctgaccaacatgctagccttcttcacggcggccatc
atccccatccccgccctgcgcgccttctccctgcaggccgggctgctcgtgctcttcaac
atgggctctgtgctcatcgtcttccccgccatcgtcagccttgaccttgtcaggcgcgac
gacaaccgtatcgacgtgctgtgctgcttccagagcgctggcccatccaatcaggtgtta
gaactgcagcaccagtcccgggaagactctcagcacgagaattccccacccccctcctat
acccctcccccctcctactccgcctcctattcctccgtccccttgcatcaaaccgtcaca
catacgtcatcggacggctcagggacagtgacgtcattagcggaatctgacggccgatat
gtgcggcgtgggaccagagaaggttctgcaggtggcgtatccacgacgtcatcacaacag
tgtctgacgccagaggacggtctgacgtgtggcgaccactgtgctcacgccaggaaggag
tgtatgacggtatctctcacctgctttgcgctcaggctctacacctttcttctcgagcac
acgtttgtcaaggtgacggtggtggtctccttcgtcgtcttgttgattgtgggtgcctgg
ggggtggcgcaggttcgcgacggccttgacctgacagacatcgtgcccagagacaccccc
gagttcagctttcttgaagcccaggctcagtactttggcttctacagcgtgtacgccgtt
acaaagaaagactttgactacccaaggaaccagaagctgttgcacgaatacaaccacgcc
ttccagcgagtggatcgcatcagcaagcaccaggacggctccgtgcccacattctggctt
gagatcttccggacttggctgaagaacctccagcggtcctttgaccgggacgtggcccgc
ggtatcatcacgaaggacggctggaactacacgcacgcctcggatgacggcatcctggcc
tacaagctgctggctcagactggggacagcgatcgcttctatgaaaagagcaaggtgatg
accagtcgccttgttgatagtaacgggatcatcaacccggacgcgttctacaactacctc
tctgcctggtacaccaacgacgccatagcttactccgcctccatgggcaacatccacccc
ctgccccacgactggctgcacgacccacaggacaacgactttaaggttctgaagtcgagg
ccgattgagtacgcccagatcccatttttcttgaccaacctgaacaacacggaggagatt
atcagcactgtcaaggacttccgtgcagtgtgcgatgagttcgtggaccgtgggctgccc
aactaccccagcggctacccgttcacctactgggagcagtacatcaacctgaggttctac
ctgatgctggccctcctgtgtgtgctgaccactacctttctggtcctcaccatcaccctc
atgaacccctggctggccgctgtcgtggtgttagtgctggccatgatcctggtggagctg
tttggcttcatgggcatcgtgggcatcaagctgagtgccgtgcccgctgtcatcctcatc
atgactgtgggcatcggtgtcgagttcacgctgcacgtggctgtgggttttgtgacgtcc
attggcagtcggaaccgtcgggtgatgatggccactgaacacacgttcgccccagtagtg
cacggagctacctccactttccttgggattatcatgctggtcagcacagagttcgacttc
atcatcaagtatttcttcaacgtgctggcggctttggtggtgattggcattctgaatggg
ttgctgttgctgccaatactgctctcatttctgggaccaaaaggggaagttattcccaaa
gaaaacccagactgcctatccacaccaacgccagagccttcaccacggatgggacgcgac
caacgtcaccaccaccaccacatacgcacctcctcttcctcctcttcctcctcccgaggc
cgtcgagtgtaccctcggcggaactctgacatctcgctctccacaatcaccgaagagcct
acgcaatattcttcgcacgagatcatcgttcagccggaggttgtggtggaaacaacgaca
attccgagcagcggtgcaacgagcgaaggaggaggtgggggaggggattggggaggagga
aagcggcgtagcagtggtaacgacagcgatgacagcagctgtgacagcagcaaaagtttt
cctgtgaccattcatgtgcccactacgagcgggggtcaaacttccactgtaacaagagtc
aaggccacagctacagtcaaggttgaagttcacacacccatacctggtggtgctgtgagc
caggaacactcgtacaaaagcaagcgtcggaaaatgaggcagttaaaggaacgggaaagt
cacggtcgcaggcactactccgactcagagtgctag
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