KEGG   Littorina saxatilis: 138967073
Entry
138967073         CDS       T10665                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
lsax  Littorina saxatilis
Pathway
lsax03013  Nucleocytoplasmic transport
lsax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138967073
  09122 Translation
   03013 Nucleocytoplasmic transport
    138967073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsax03019]
    138967073
   03041 Spliceosome [BR:lsax03041]
    138967073
Messenger RNA biogenesis [BR:lsax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     138967073
Spliceosome [BR:lsax03041]
 Complex C
  Other components
   EJC/TREX
    138967073
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    138967073
SSDB
Motif
Pfam: efThoc1 Death DUF6466 FGF-BP1
Other DBs
NCBI-GeneID: 138967073
NCBI-ProteinID: XP_070195652
LinkDB
Position
LG5:complement(38861131..38877270)
AA seq 650 aa
MAASVEFEFSGACVAFQDTVKQAAGNSDASQCFSFVEAYSGNDQEKKAALDQAMREVLRS
MIVFDQGCEEYKKLIGMAVDAVTKELCSASTPFLMLADVFDMMVLDDCQDMFDFVEDRVL
TWKSEPFFDAGKNYLLRMCNDLIRRLSKSQNTVFCGRIQLFLSRLFPLSEKSALNLMSQF
NLENITVFASQSSDAKASESAIKQEKMEVEDGGKDASALLIDYNLYRKFWSLQDYFRKPV
QCYDKAAWRAFAMYSDEVLNAFMSCKLDDMLSQRKILARRDDHTTNFFAKYLTSEKLLDL
QLSDSNFRRYVLVQFLILFQYLTSTVRFKGATQVLSEEQTNWVKASEEKVYQLIRETPPA
GDKFADIVKHVLQREEHWNNWKNEGCPSYERAKAKDAPKPKSRPKRRRIGEDLQGGGGKI
IKMGSAELTRLWNLNPDNMEACRSEKREFTPTLEEFFANAIEQNDPEAMVEDQYKDIHTQ
NFQWKALRLLAQRSPHFFLNTHQPAIPLPKYLDTMISKIAKEMPANGNEEMKTQVGEEEE
DDMKETQDETETVEEQEQNKEDVNEEITEEQMKAVAELLGDNWKKLASELRFSGEDIADF
EALGTGESAAAKMIFLWQDSDPENTAPVLRDALKEIGQLAIAESVFGPSS
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcagcctccgtggagttcgagttttcgggtgcttgtgttgcatttcaggatactgtc
aaacaagcagccggcaacagcgatgcatcacagtgtttcagctttgtggaagcttacagc
ggaaatgaccaagagaaaaaggctgcccttgaccaagccatgagggaggtgctgagaagt
atgattgtctttgatcaaggatgtgaagaatataaaaagctgattggaatggctgttgat
gcggtcaccaaagaactttgctcagcctctactccatttcttatgctggccgatgttttt
gacatgatggtgctggacgattgtcaggatatgtttgactttgttgaggaccgtgtctta
acttggaaatcagaacctttctttgacgctggcaagaactacttgcttcgaatgtgcaat
gatttgatacgccgcctgtccaagtcgcaaaacacagtgttctgcggacgcattcagctc
tttctgtccagactttttccattgtcagaaaaatcagccctgaacttaatgagtcagttc
aacctggaaaacatcacagtgttcgcctcacaaagctctgatgccaaagcttcagagtct
gccatcaaacaggagaaaatggaagtggaggatggaggaaaagatgctagtgctcttctc
attgactacaacttgtatcgcaagttctggtccctgcaagactacttccgcaagcctgtt
caatgttatgacaaggcggcctggagagcctttgctatgtactctgacgaagtactaaac
gctttcatgagctgcaaactggacgacatgctatcacaaagaaagatactggcaagaagg
gatgaccacaccacaaacttcttcgccaaatacctcaccagtgaaaagctgctggatctg
cagctatcagacagcaacttccgacgttacgttctggttcagtttctcatcctctttcag
tatcttacctccactgtcaggtttaaaggggctacacaggtgctgagtgaggagcagaca
aactgggtgaaggcgtcagaggagaaagtgtatcagctcatccgtgaaacgccgcccgcc
ggcgacaagtttgctgacattgtcaagcatgtattgcaaagggaagaacactggaacaac
tggaagaatgagggctgtcccagctatgaacgagcgaaagccaaggatgcacccaagccc
aaaagcagaccaaagcggagacgaataggcgaggatctccagggaggtgggggcaaaata
atcaagatgggcagcgcagagctcacacgcctctggaacctcaaccccgacaacatggag
gcctgccgatcagagaaacgagagttcacgccgacacttgaagaattttttgcaaacgcc
attgagcagaatgacccagaggctatggtcgaggaccaatacaaagacattcacacccag
aatttccagtggaaagcattacgactgctggcacagcgctcaccgcactttttcctcaac
acacaccagcctgctattccattacccaagtacctggataccatgatctccaaaatagcc
aaagagatgcctgcaaatggaaacgaggagatgaagacacaggtaggagaggaggaagag
gatgacatgaaggagacacaggatgagacagagaccgtggaggagcaggaacaaaacaag
gaagacgtgaatgaggagatcacggaagaacagatgaaggctgtagcagaactgctgggc
gacaactggaagaaactggcctcagaacttcgcttctctggtgaagacatcgctgacttt
gaagcactgggcacaggggagtcggctgctgccaagatgatcttcttgtggcaggattct
gacccggaaaacactgctcctgttctgcgtgatgcactgaaggagatcggacaactggcc
attgctgagtctgtgtttggaccttcctcttga

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