Littorina saxatilis: 138967073
Help
Entry
138967073 CDS
T10665
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138967073
09122 Translation
03013 Nucleocytoplasmic transport
138967073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138967073
03041 Spliceosome [BR:
lsax03041
]
138967073
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138967073
Spliceosome [BR:
lsax03041
]
Complex C
Other components
EJC/TREX
138967073
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138967073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DUF6466
FGF-BP1
Motif
Other DBs
NCBI-GeneID:
138967073
NCBI-ProteinID:
XP_070195652
LinkDB
All DBs
Position
LG5:complement(38861131..38877270)
Genome browser
AA seq
650 aa
AA seq
DB search
MAASVEFEFSGACVAFQDTVKQAAGNSDASQCFSFVEAYSGNDQEKKAALDQAMREVLRS
MIVFDQGCEEYKKLIGMAVDAVTKELCSASTPFLMLADVFDMMVLDDCQDMFDFVEDRVL
TWKSEPFFDAGKNYLLRMCNDLIRRLSKSQNTVFCGRIQLFLSRLFPLSEKSALNLMSQF
NLENITVFASQSSDAKASESAIKQEKMEVEDGGKDASALLIDYNLYRKFWSLQDYFRKPV
QCYDKAAWRAFAMYSDEVLNAFMSCKLDDMLSQRKILARRDDHTTNFFAKYLTSEKLLDL
QLSDSNFRRYVLVQFLILFQYLTSTVRFKGATQVLSEEQTNWVKASEEKVYQLIRETPPA
GDKFADIVKHVLQREEHWNNWKNEGCPSYERAKAKDAPKPKSRPKRRRIGEDLQGGGGKI
IKMGSAELTRLWNLNPDNMEACRSEKREFTPTLEEFFANAIEQNDPEAMVEDQYKDIHTQ
NFQWKALRLLAQRSPHFFLNTHQPAIPLPKYLDTMISKIAKEMPANGNEEMKTQVGEEEE
DDMKETQDETETVEEQEQNKEDVNEEITEEQMKAVAELLGDNWKKLASELRFSGEDIADF
EALGTGESAAAKMIFLWQDSDPENTAPVLRDALKEIGQLAIAESVFGPSS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccgtggagttcgagttttcgggtgcttgtgttgcatttcaggatactgtc
aaacaagcagccggcaacagcgatgcatcacagtgtttcagctttgtggaagcttacagc
ggaaatgaccaagagaaaaaggctgcccttgaccaagccatgagggaggtgctgagaagt
atgattgtctttgatcaaggatgtgaagaatataaaaagctgattggaatggctgttgat
gcggtcaccaaagaactttgctcagcctctactccatttcttatgctggccgatgttttt
gacatgatggtgctggacgattgtcaggatatgtttgactttgttgaggaccgtgtctta
acttggaaatcagaacctttctttgacgctggcaagaactacttgcttcgaatgtgcaat
gatttgatacgccgcctgtccaagtcgcaaaacacagtgttctgcggacgcattcagctc
tttctgtccagactttttccattgtcagaaaaatcagccctgaacttaatgagtcagttc
aacctggaaaacatcacagtgttcgcctcacaaagctctgatgccaaagcttcagagtct
gccatcaaacaggagaaaatggaagtggaggatggaggaaaagatgctagtgctcttctc
attgactacaacttgtatcgcaagttctggtccctgcaagactacttccgcaagcctgtt
caatgttatgacaaggcggcctggagagcctttgctatgtactctgacgaagtactaaac
gctttcatgagctgcaaactggacgacatgctatcacaaagaaagatactggcaagaagg
gatgaccacaccacaaacttcttcgccaaatacctcaccagtgaaaagctgctggatctg
cagctatcagacagcaacttccgacgttacgttctggttcagtttctcatcctctttcag
tatcttacctccactgtcaggtttaaaggggctacacaggtgctgagtgaggagcagaca
aactgggtgaaggcgtcagaggagaaagtgtatcagctcatccgtgaaacgccgcccgcc
ggcgacaagtttgctgacattgtcaagcatgtattgcaaagggaagaacactggaacaac
tggaagaatgagggctgtcccagctatgaacgagcgaaagccaaggatgcacccaagccc
aaaagcagaccaaagcggagacgaataggcgaggatctccagggaggtgggggcaaaata
atcaagatgggcagcgcagagctcacacgcctctggaacctcaaccccgacaacatggag
gcctgccgatcagagaaacgagagttcacgccgacacttgaagaattttttgcaaacgcc
attgagcagaatgacccagaggctatggtcgaggaccaatacaaagacattcacacccag
aatttccagtggaaagcattacgactgctggcacagcgctcaccgcactttttcctcaac
acacaccagcctgctattccattacccaagtacctggataccatgatctccaaaatagcc
aaagagatgcctgcaaatggaaacgaggagatgaagacacaggtaggagaggaggaagag
gatgacatgaaggagacacaggatgagacagagaccgtggaggagcaggaacaaaacaag
gaagacgtgaatgaggagatcacggaagaacagatgaaggctgtagcagaactgctgggc
gacaactggaagaaactggcctcagaacttcgcttctctggtgaagacatcgctgacttt
gaagcactgggcacaggggagtcggctgctgccaagatgatcttcttgtggcaggattct
gacccggaaaacactgctcctgttctgcgtgatgcactgaaggagatcggacaactggcc
attgctgagtctgtgtttggaccttcctcttga
DBGET
integrated database retrieval system