Littorina saxatilis: 138967106 Help Entry 138967106         CDS       T10665                                  Name (RefSeq) exosome RNA helicase MTR4-like   KO K12598   ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] Organism lsax  Littorina saxatilis Pathway lsax03018   RNA degradation Brite KEGG Orthology (KO) [BR:lsax00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     138967106  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lsax03019]     138967106    03041 Spliceosome [BR:lsax03041]     138967106    03009 Ribosome biogenesis [BR:lsax03009]     138967106    03016 Transfer RNA biogenesis [BR:lsax03016]     138967106 Enzymes [BR:lsax01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      138967106 Messenger RNA biogenesis [BR:lsax03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     TRAMP complex      138967106 Spliceosome [BR:lsax03041]  Complex B   U4/U6.U5 tri-snRNP components    U4/U6.U5 tri-snRNP related factors     138967106  Complex C    U4/U6.U5 tri-SnRNP related factors     138967106 Ribosome biogenesis [BR:lsax03009]  Eukaryotic type   Pre-60S particles    Helicases     138967106 Transfer RNA biogenesis [BR:lsax03016]  Eukaryotic type   tRNA degradation factors    TRAMP complex     138967106 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MTR4_beta-barrel DSHCT DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII nSTAND3 DBC1 Motif Other DBs NCBI-GeneID:  138967106 NCBI-ProteinID:  XP_070195686 LinkDB All DBs Position LG5:complement(39024265..39077457) Genome browser AA seq 1020 aa AA seqDB search MADAFGDELFDVFEENSGSAPIVRPDNSDDTRDSSKRADDLFKQVTTKRPAEGEENEGPV KKLRGEETSVEVMPRIQVHKVETVEACQHEVAVPPDHEFLGLQQSNSQPAKEYPFVLDPF QKEAILCLENNQSVLVSAHTSAGKTVVAVYAIAMSLRDKQRVIYTSPIKALSNQKYRELY EEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERG VVWEETIILLPDNVHYVFLSATIPNATQFAEWVCHLHNQPCHVVYTDYRPIPLQHYIYPA GGDGLHLAVDENGDFREENFNTAMSVLKEAGDAAKGDQRGRRGGSKAHESSIFKIVKMIM ERNFAPVITFSFSRKECEAYGMQMSKLDFNTEDEKKLVEEVFNNAIDSLSDDDKKLPQVE HLLPLLKKGVGIHHSGLLPLLKETIEILFSEGLIKALFATETFAMGLNMPARTVLFTSCR KFDGKDFRWVTSGEYIQMSGRAGRRGLDERGIVILMVDDLMTPSAGKAIVNGLPDPLNSA FHLTYNMVLNLLRVEEINPEFMLERSFYQFQNYAAIPGLLEKLKKCEDKYHKMDITEEES VSSYFRIRQQLDNLGRDLRAFILKPVYLLPFLQPGRLVRIKNKDDDFGWGVVVNFQKKMD QSGATEDTGPLYVVELLLYLSKESTRSRSTANLKPCPKGEKGEMQVVPILTKLIQSLSAI RLYIPSDLRSSEHRLSVYKSMQEVEKRFPDGLPLLDPIEDMGIKEKGLKEVIKKIEAFEH RLYTHPLHKDPRLEELYSSFEKKTQLGNEIKALRLELKKKKSLLQMDELKCRKRVLRRLG YATASDVIETKGRVACEISSGDELVMTELLFNNVFNDLSPAQCCALLSCFVFQERASEMP KLTEELSGPLRLMQETAKRIARVSKEAKLEIDEEEYVESFRPHMMDIVYEWCNGCSFSKI CKMTDIFEGSVIRCMRRLEETLRQMVQASKAIGNTELENKFAEGIRLIKRDIVFAASLYL NT seq 3063 nt NT seq  +upstreamnt  +downstreamnt atggctgacgcttttggagacgaattatttgacgttttcgaagaaaattcaggctcagca ccaatagtacggcctgataacagtgatgatacacgcgatagttctaagagggcagatgac ctgtttaaacaggttacgaccaaaaggccagcagagggtgaagaaaatgaaggtcctgtt aagaagcttcgtggggaagaaacaagtgtggaggtgatgccacgcattcaggtgcacaaa gtggaaaccgtggaagcttgtcaacatgaggtagcagttccgcctgaccatgagtttctg gggctgcaacagtcaaacagccagccggccaaagagtacccctttgtcctcgaccctttc cagaaagaagccatcttgtgtctggaaaacaaccagtccgtgttggtgtctgcccacaca tccgctggaaagactgttgtggctgtgtacgccatcgccatgtccctgcgtgacaagcaa cgagtgatctacacgtcccccatcaaggcgcttagcaaccagaagtaccgggagctgtat gaggagtttcaggatgttggtctgatgactggggacgtcaccatcaaccctaccgccagt tgtcttgtcatgaccacagagatcctgcgaagtatgctgtacagaggttcagagatcatg cgtgaggtggcctgggtcgtctttgatgagattcattacatgagagacaaagagcgaggt gtggtgtgggaagagaccatcatcctgctgccagacaacgttcactacgtctttctctct gccactatccccaacgccacacagtttgcagagtgggtttgtcacctgcacaatcagccc tgccacgtggtgtacacagactatcgccccatcccccttcaacactacatctatcctgct ggtggggatggtctgcatctggccgtcgatgaaaatggagattttcgtgaagagaacttc aacacagccatgtccgttctgaaggaagccggagacgcagccaagggagatcagcgaggc agacgaggaggctcaaaagctcatgagtcgagcatcttcaagattgtgaagatgatcatg gagaggaactttgcccctgtcatcactttcagcttcagtcgcaaggagtgtgaggcatac ggcatgcagatgtcaaaactcgacttcaacacagaggacgagaagaaactggtggaagaa gtgttcaacaatgctattgattccttgtcagatgatgataagaaactgcctcaggtggag cacttattaccactgctgaaaaaaggagttggcatccatcactcagggctgctgcctctt ctgaaagaaaccattgagatcctcttctctgagggactcatcaaggctctgtttgccaca gagacatttgctatgggtctcaacatgcctgcccgcactgtgctcttcacaagctgtcgc aagtttgacggcaaagacttcagatgggtgacatcaggggagtacattcagatgagcggc agagcaggacgtcgaggtcttgacgagcgtggaattgtcatcctgatggtggatgacctg atgactcccagtgctgggaaagccattgtcaatggtttaccagacccactgaactctgct ttccacctaacttacaacatggtgctcaacttgctgagagtggaggagatcaacccagag ttcatgctggagaggtccttctaccagttccagaactacgctgccattcctggactgcta gaaaagctgaagaaatgtgaggacaaataccacaaaatggacatcacggaggaggaatcg gtgtcctcgtacttccgcatccgtcagcagctggataaccttgggcgtgaccttcgtgcg ttcatcctcaagcctgtctaccttctgccctttctccagcctgggaggcttgtcaggata aaaaacaaagatgatgactttggctggggtgtagtggtcaacttccagaaaaagatggac cagagcggggcgacagaggatacggggccactgtacgttgtggagttgctgttgtacctg agcaaggaaagcactcgcagtcgcagcactgccaatctcaaaccttgtcccaagggcgaa aaaggagagatgcaggtggtgcccatcctgaccaagttgatacagtcgctgagcgccatc cgtctctacatccccagcgacctgcgctcctcagaacatcgcctcagcgtctacaagtct atgcaggaggtggagaagcgcttccctgatggtctgcccctgttggaccccattgaggac atgggcatcaaggagaaaggcctcaaggaagtcatcaagaaaattgaggcctttgaacac aggctctacacacacccattacacaaagacccaaggctggaagaactgtactcgtcattt gaaaagaaaacacagcttggcaacgagatcaaggctcttcgtctggagctgaagaagaaa aagtccctgctgcagatggatgagttgaagtgcaggaaacgagtgttgcgtcgcctaggt tacgccacagcttccgacgtcattgagacaaagggcagagtggcctgtgaaatctcaagt ggagacgaactggtgatgacggagctgctgtttaacaacgtgttcaacgacttgagtccc gcccagtgctgcgctctgctcagctgcttcgttttccaggagcgagcatcagagatgccc aaactcaccgaggagttgtctggaccacttagactcatgcaggagacagccaagaggata gcacgggtgagcaaggaagccaagctggagatagacgaggaggagtatgtggagtcattc cgccctcacatgatggacattgtgtacgagtggtgcaacggatgctccttctccaaaatc tgcaagatgaccgacatctttgaaggcagtgtgattcggtgcatgaggagactggaggag acactgcggcagatggtccaagcatcaaaagctatagggaacacagaactggaaaacaag tttgcagaaggtattcgtctgatcaagagggacattgtgtttgctgcaagtttgtacctg tga

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