Littorina saxatilis: 138967171
Help
Entry
138967171 CDS
T10665
Name
(RefSeq) transcription initiation factor TFIID subunit 4B-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lsax Littorina saxatilis
Pathway
lsax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138967171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsax03021
]
138967171
03036 Chromosome and associated proteins [BR:
lsax03036
]
138967171
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138967171
Coactivators
SAGA/TFTC/STAGA complex
138967171
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138967171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
PE
Motif
Other DBs
NCBI-GeneID:
138967171
NCBI-ProteinID:
XP_070195786
LinkDB
All DBs
Position
LG1:complement(32304225..32326713)
Genome browser
AA seq
1022 aa
AA seq
DB search
MADPGSIDDFLSSEIDENAVNALVGSLETQLASPASTQASKPLTDSSYNNNHIGGTTPSS
SVRPHFHSNQTVTPNQKGSVSNSISLNAHSPVSTPKLSNAEILGISSIINSSSTPVCGGG
VSHVNVNTSISSNGSRTDGQKVSTPTIRIVTQSSSTPVSSTNSAQFITSGGGVISQTSVP
SGATNNVHAVHVSSMGAVTRTNATAASSTIYNLATIAAEQKPHTVVHNGSAHPIQVTKDR
AVIPQQGFIVKQEGGATLAIKQEGVHANQQFIVKQEGNTPVHIKQDPGVAHSGTLVNTTL
KGVAGVSNPSIITVRAHPHPQQVTVVQQPAVVTTQANMTQSMQVVNVSGMQGTPRLANVA
PSMGKPGVRVSTPVRITQQPNIAPRQPLHGSSNPVTIPHGTLLMRNEQGQLMIVQTGGPG
QPGGASLHPNIITTTSVPITTSSGMKMQRPVTTTLPRPGGGTIVIQPGGQTRGQPVTLTQ
PPTPRVISQPTPTMPAPSIAQPQPAAVPELNKMMLENVKKCKNFLSTLLKLAANQPASTV
KNVQGLIQGLIDSKVEPENFTHKLQHELKSSPQPYLVPFLKKSLPMLRQSMQLGKMSIEG
IRPPPHDVVIATPSSQTTQATIQRPQIMSQQTTVVRPPMTSQAALKQPKSFQGASPRLTL
PQKVTLSGNSVLAQQKGGVVMAAASPLQTKPLVQQQAMVRPPLSQLGPASSKFHMQAAKP
STSVAPPRAKGGASAAVTAALQAHAQKVDTASTAGHKEKRKFEALKEDNDDINDVATMGG
VNISEESKNILATNSELIGSQIRSCQDKTFLPHDLLMARIAAVAKKHGLEGVSPDVTRIV
SHATQERLRDLISKLSTIAEHRMEIYKMDSRYEVSSDVRGKLKFLEELDKLEKKRHEEQE
REMLLRAIKSRSKNEDPEQLKLKQKAKELQQAEAEEVRQREANLTALRAIGPRKKRKLDE
ESGQPGSSGPSSLPNGPGTPSNRQSVIGRPRIKRVTNRDMQFLMEQDRHLCKSPLLYRTF
LK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctgggtccatcgacgatttcttgtcttcagagattgatgaaaatgcggta
aacgcgttagttggttcccttgaaacacagttagcatccccagctagcactcaagcatca
aaacctctcacagactcatcttacaacaacaatcacataggtgggacaacaccatctagt
tctgttcgtcctcactttcactcaaatcaaacagtgactccaaaccagaaaggatctgtg
tctaatagcatttctttgaacgctcattcacccgtgtctactccgaaattgtcaaatgca
gagattttaggaatctcgtcgattatcaattcatctagtacgcctgtatgtggtggtgga
gtatcacatgtgaatgtaaacacaagcataagtagcaatggtagtaggacagatgggcag
aaggtctcaaccccaacaataagaatagttacacagtctagttccacaccagtgtcttct
acgaacagtgcacagttcattacaagtggtggaggtgtgatctctcaaacaagtgttcct
tcaggagctacaaacaatgtgcatgctgtgcatgtttcaagcatgggtgctgtaacaagg
acgaatgctactgctgccagtagcactatatacaatctagcaactattgcagctgaacag
aaacctcacactgttgttcacaatggcagtgcacatcctatccaagtcacgaaggatcgt
gcagttataccacaacaaggtttcatagtgaaacaagaagggggtgctactttggccata
aagcaggaaggtgtccatgcaaaccagcagttcattgtgaaacaagaaggcaacaccccg
gtgcacatcaagcaagatccaggtgtggctcattcagggacgttggtgaacacaacgctc
aaaggtgtggccggggtttcgaaccccagcatcatcacagttcgtgcgcatccacacccg
cagcaggtaactgttgtgcagcaacctgctgttgtgactacacaggccaacatgacgcag
tctatgcaggtggtcaatgtgtctgggatgcaagggacgcctcggcttgccaatgtagca
ccaagcatggggaaaccgggtgtgagagtgtcgacacctgtgagaattacccagcagccc
aacattgccccacggcagcccctgcatggctcaagtaacccagtgacgatcccacacggg
acgctgttgatgcggaacgagcaaggtcagctgatgatcgttcagacggggggaccaggt
cagcctgggggcgcctccctccaccccaacatcatcaccaccacctccgtgcccattacc
acgtccagcggcatgaaaatgcagcggcctgtaacgacaactttgcctcgtcctggtgga
ggcaccattgtcatccagcccggtggtcagacaagaggtcagcctgtgaccttgacccaa
cccccaacccctcgagtcatctcccagccaacacccaccatgccagctccgtccatcgca
caacctcaaccggccgctgttcctgaactgaacaaaatgatgctggaaaatgtcaaaaag
tgcaaaaactttctgtccacacttttaaagctagctgccaaccagcctgctagtactgtc
aagaatgttcagggcctcattcagggcctcatcgactccaaggtggagccggagaacttc
actcataagttgcagcacgagctcaaatcctctccgcagccttacctcgtcccatttctc
aagaaaagcttgccaatgctccgtcaatccatgcagctggggaagatgagcattgaggga
attcgaccaccaccccatgatgttgtcatagcaacgccttcgtcccaaaccacacaagca
actattcagaggccgcagattatgtcacagcaaacaactgtggtgcgaccaccaatgaca
tcgcaggctgcgctgaagcagcccaaatccttccagggggcctctcctcggttgacctta
ccgcagaaagtgaccctttccggtaattctgttctggcccaacagaaaggtggcgtggtg
atggcagctgcctctccgctacagaccaaacctctcgtacagcagcaagcaatggtgcgg
cctccactctcccagctgggtcccgcctctagcaaatttcacatgcaggcagcaaagccg
tccacatcagtagcgccacctcgagccaaagggggagcatcagcagcggtgacggcagcg
ttgcaagcccacgcgcagaaggtcgatactgccagcaccgcgggtcacaaggagaagagg
aagttcgaggctctcaaggaggacaatgacgacatcaacgatgtggcgaccatgggtggt
gtcaacatatcggaggagtccaagaatatcctggccaccaactcagagctgattggttcc
cagatccgttcgtgtcaggacaagactttcctgcctcacgacctactcatggctcgcatt
gctgctgttgccaaaaagcacgggttggagggagtttctcctgatgtcactcgcatcgtt
tcccacgctacccaggagcgattacgagacctcatcagcaagctgtccactattgctgag
catcggatggagatttacaaaatggactcgcgctacgaggtgtcatcagacgtgcgggga
aaactcaagttcctggaagagctggacaagttagagaagaagcgacacgaagagcaggag
agggagatgcttcttagggccatcaagagtcgatcaaaaaatgaagacccagaacagttg
aagctgaagcagaaagccaaagaattgcagcaggcggaggcggaagaagttcggcagcga
gaagccaacctgacagccctcagagctatcgggcctcgcaaaaaacggaaactggatgag
gaatcgggtcaaccaggcagttccggtcctagtagtttacccaatgggcctggtacacct
tccaacaggcagtctgtgattgggcgacctcgcatcaagcgtgtgacgaacagagacatg
cagtttcttatggagcaggatcgccacttatgcaagtctcccttattgtacagaacattc
ctcaagtga
DBGET
integrated database retrieval system
