Littorina saxatilis: 138967607
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Entry
138967607 CDS
T10665
Name
(RefSeq) probable ATP-dependent RNA helicase vasa-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsax03036
]
138967607
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138967607
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138967607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_2
zf-CCHC_3
ResIII
SNF2-rel_dom
AA_kinase
zf-CCHC_5
P-loop_SecA
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138967607
NCBI-ProteinID:
XP_070196311
LinkDB
All DBs
Position
LG5:60193232..60222353
Genome browser
AA seq
836 aa
AA seq
DB search
MDENWDEGGSSAQPAAVNGSKLRGFGRGKALQQLGTEMNGQTNGFGSSNGTARSGFGGGS
SSGGAFGKPSGGGGFGAPKAADEDDGWNEDAPPPSSGGGFGGRGGGFGGGRGGGFGGGRD
RFKNRNFQFRKRGGGGGSSGGSGCHKCGEDGHFARECPSGGGGRGGGGGGRGCHKCGEEG
HFARECPSGGGGGGGGGRGCHKCGEEGHFARECPSGGGGGGGGGRACHKCGEEGHFAREC
PSGGGGGGGARSGGGFSRPEGGFGKASDSNGFGAPSGDSGGGSRGGGFGGSSGGGRNDAS
GGGSGCRRCGEEGHFARECPNKGEGGGQGGACHKCGEEGHFARECPQALADGEKPREIYV
PPEADEDDLFKSGIHQGINFDKYDNINIEVTGNDSKFKPISSFEEAGLLPTFLQNVQKAC
YVKPTPIQKYAIPAILAGRDIMGCAQTGSGKTAAFILPVLTAMYQQGLTTSSFSPVQEPQ
AIVVAPTRELATQIYTEARKFAARTDIRPVVVYGGTSVGHQMRQVENGANIVVGTPGRLL
DFIEKGKISLAKTKFLILDEADRMLDMGFEPCIRKLVDTLGLPPKTQRQTLMFSATFKAE
IQRLAADFLNDYLFITVGIVGGACSDVEQTFLEVDRLQKREYLCDILNTAGTQRVLVFVG
QKRNADFLASYLSQTGYPTTSIHGDRLQREREEALRDFKSAKTPVMIATNVAARGLDIPD
VAYVINYDLPTDIDEYVHRIGRTGRCGNLGKATSFYSQDTDFALASDLVKILSESRQIVP
DWLADYASSGGGGDAGRFSGRFASKDIRHKGKFDSGGGDAGGGGGFATTADDESWD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaattgggacgaaggcggatcatcagcgcagcctgctgcagtgaacgggtca
aaactgagaggctttgggcgaggcaaagctctgcaacagttagggacagaaatgaacgga
cagacgaatggttttgggtcatccaacgggacggcccgcagtggttttgggggtggtagc
agcagtggaggtgccttcggaaaaccctcgggaggaggagggtttggggcgcccaaagca
gcggatgaagatgatggctggaatgaggatgctcctccaccaagttcagggggcggcttt
ggcggaagaggaggtggttttggcggcgggagagggggtggttttggcggcggaagagat
cgatttaaaaacagaaattttcaatttcgtaaacgtggtggaggcggtggcagctcgggg
ggttctggctgccacaagtgtggtgaagacggacattttgccagggagtgtcccagcgga
ggcggcggtcgtggtgggggaggcgggggcagaggttgccataagtgcggagaggaaggt
cactttgccagggagtgccccagcggtgggggtggtggcggcggaggtggtagaggttgc
cacaaatgcggcgaggaaggccacttcgcaagggagtgtcccagtggtggtgggggaggt
ggtggcggaggaagagcgtgccacaagtgtggtgaggagggtcattttgccagggagtgc
cccagtggtggagggggaggtggtggagccaggagcggcgggggattcagcagaccggag
ggagggtttgggaaagcgtcggacagcaatggattcggagccccttctggtgacagtgga
ggtggctccaggggcggagggtttggaggctcttcaggtggcggtaggaacgatgccagt
ggtgggggcagcggttgccgcagatgtggagaggaaggccactttgccagagaatgccct
aacaagggtgaaggaggaggacaaggaggagcatgccataagtgtggggaggagggccat
tttgcccgtgaatgtcctcaggctcttgctgacggcgagaaacctcgtgagatctatgtg
ccaccagaggctgatgaagacgacctgttcaagtcaggcatccatcaaggcatcaacttt
gacaagtatgacaacattaatatagaagtgacgggcaacgacagtaaattcaagcccatc
agttcctttgaggaagccgggctcctgcccactttcttgcagaatgtccagaaagcctgc
tacgtcaagccgactcccatccagaaatacgccattcctgccatcctggctggtcgtgat
atcatgggctgcgctcagaccggctctgggaaaactgctgcattcatcctgcctgtgctg
acggccatgtaccaacaaggcctgaccaccagctctttcagcccggtgcaagagccacag
gccatcgttgtcgcccccacgcgcgagctggccactcagatctacacagaggcacgcaag
ttcgcagcacgcacagacatacgcccggttgtggtgtatggaggaacgtccgtgggtcac
caaatgaggcaggtggaaaacggggccaacatcgtggtgggcacacctggccgtctcctg
gacttcatcgagaaaggaaagatcagcctggcaaagaccaagttcctgatcctggacgag
gctgaccgcatgctggacatgggattcgaaccctgcatccgcaagctggtggacactctg
ggcctgccgcccaaaacccagcgacagaccctcatgttcagcgccaccttcaaggcggaa
atccagcggcttgccgcagactttttgaacgactacctgtttatcacggtgggcatcgtg
ggcggcgcgtgctcggacgtggagcagactttcctggaggtggaccgtctgcagaagcgg
gagtacctgtgtgacatcctcaacacagcaggcacacagcgagtgctggtgttcgtggga
cagaagcgaaatgccgacttccttgcttcctacctgtcacagactggctatcccacaaca
agcattcatggagatcgtctgcagcgtgagagagaggaggcgctgcgtgacttcaagtcg
gccaagactcccgtgatgatcgcaaccaacgtggccgctcgtggccttgacattcctgac
gtggcctatgtcatcaactacgacttgccgacagacatagacgaatacgtgcaccgcatc
gggcgaacgggaaggtgcggcaatcttggaaaggccaccagcttctacagtcaagatact
gattttgctctggcctccgacttggttaagatccttagtgagtcaagacaaatagttcct
gactggctggccgactatgcatcgtcaggtggcggcggtgatgctggaaggttctctggt
cgctttgccagcaaggatatccgtcacaaaggaaagtttgacagtggtggtggtgatgca
ggcggtggtggagggtttgctaccaccgctgatgatgagagttgggactag
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