Littorina saxatilis: 138967609
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Entry
138967609 CDS
T10665
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsax03036
]
138967609
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
138967609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
TPR_DNAAF5
Cnd1
Motif
Other DBs
NCBI-GeneID:
138967609
NCBI-ProteinID:
XP_070196314
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All DBs
Position
LG5:complement(60248597..>60322426)
Genome browser
AA seq
2101 aa
AA seq
DB search
MNGEIPSIPITTLAGVASLTDLLPQLPLPTPLPHTVNNKSLLFNQKIAEDAQRILSSADE
GLAQQLVQALHQTQTTHIEVKDSLATESLEGELPQLLKCILRKDPNAFRTRATFEAGVQQ
QTRGSVHGVQQQQQQQQQHTTPSHSTSPYVSQNNSPRYPPSTSGMFPNQSGSYQQHGSPY
AATSAGMTSPVSQQRSNHQRYSNSAVNGECFSGDANLILGHGSVMPAGHQQNKLPVSSPA
QATAAERVLPHQPQQQVSQPPSSSYPSGEDTRLSYNRRQSRSSQSAADNSVPSSSRRNSG
SSRVSDSSGHATDRDSAAQSRDGGAGLLGARVAMAEPRVVLENIVQESRGRLSHSTPQES
VSHNQKKPRGPVVMLEMLDPAKIASVNCKDSGDNNKVSLSRGRKTLKSIASGGTVKAVCD
NESRKRKRSRDEPGYSIMAEAGSMSFQAPKRRADRGRGGKRKSQYFEESDEESSEFVEME
EEDEETYLARKRKKEKQRQRQRRSMVPTLSSEELMDSPTFKKFTSCMEYVFDTAEDADLT
ALDINDEDVECPPELLVAKGIMGDLCGESAKLKSMNVMSQIPPSKLVRLMTILSWNIRDG
TKVTPFVNQDEDEEESRLWREVTMERVIRSMDASLTCLSVMTSVSMHKMAYLEDVIERMI
LYAKFQLQNTIYPEFDPVYRVDPGAKDGYHGSLKAKRARASTVKHKSSINVYNKMCEMVN
WFAELLCIQEMTDTIILQMSSVGVSAFFVENISELQLNAMKLVTTIFSRYDKHRQLILED
IFASLARLPSSKRNLRNFRLNSEESIQMVTALALQLIQCVVKLPSEDASSRPPSPTEESD
SKRQQKSIASDKGGGNNDVVIVTSYETAMRTAYNFLTVFLKKCTTKGEEDYRPLFENFVQ
DLLSTVNKPEWPSSELLLSLLGRILVQQFSSKSTDTSLRVASLEYLGIVAARLRKDAVSS
QLNQEVIDDIVHRVNEDDEEEASTRSKKKTKHPGDTMQSLQESILEYLAYNGQSEPALQF
ARQFYVAQWYRDTTVEAEKKIKQQQNASGSDDEDFNETEAETTTEVMQNVEKRKHFLLSQ
IASAQTTLATYRPSPSKLDYDSACLVARYLSSKRPFAQSFDVYLTQILKVLSETAVAVRT
KAMKCLTAVVESDPGILARNDMQRGVHGRFLDQSTSVREAAVELVGKFILIRPELIPKYY
DMLNERILDTGISVRKRVIKIFKDICIDQPDFGKIPEMCVKMIRRVNDEEGIKKLVNDVF
QTMWFSPVSTRDRDSSRLLQKVMNITDVVAACKDTGYEFFEQMLENLLKKDEDGNYNKSA
ILACTQIVDCLVENVLRIEEKSVEMTEAKNTSSRLVACLSTLFLFSKIKPDLMVRHATTL
QPYLDIKCSSQSDYLVLHYVARILELVVPLMDHPSENFLMALEEDMIKLILKHGMMVVQS
CVSCLGSVVNRVSHNYTLVKDCFGKFFGVLTKLMLDHKEDCTNPALKGRKPTLLRSLFTV
GQLCRHFDFDSKEMGEAKVCVRQKVFDVLYYFIHHEEEDVQHKALTALGFFLCRHYEYML
GKLLRDMYHDFLTNDNAPIKLRCQVLKNLQLYLVEEEITMSKSDADWKKHSKQEDLKEMG
DVQSGMASTVVQLYLKQLLEAFYHDHSQVRITALHVVQLILRQGLVHPVQCMPYLICMST
DPENVVRVKADQQLEEIEKKYPGFTHMKALMGIKNSYRLQQVLHKNNPLEPIRGFRQTEE
GQFQALNGFLYSVLRSNRSHRRGLLTSLLNLFDDTGLQRITMGEQVYVADNLAFFPFVVQ
DEPLFVMHQIDIIVSVAGSNLMQSFKENLLPRNQGEQNGIHHEGLPEEARVKLAAEDDDD
DDPDSLISRLPDDISTLQEIMQQSQGCILLLMMKQHLKDMYGLTDSKIHRYSPTEAAKVF
DKPLNRKNIIRFTPQHTLDQLRSVFDADPEEDEKRQKLVDEYLEFRDLMMSIDPADEDDS
GDEQHSTGAATPSRKSPAHDGDGGDASNAAMAVDGVHPEGEPVDGMEKPGTPVANNTPKA
KLPYYYHRRERSEQKPHRHRTPKLLISSSTPKSLPPKKKKKKRKKADASDNDSDDDPDFV
L
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgaaataccaagtatacccatcacaactctcgctggggttgcgagcttgaca
gacttgcttccacaattgccgctgccaaccccattaccacacacagtgaacaacaagagc
ctgctgttcaaccagaagatcgctgaagatgctcagcgcatcttgtccagtgctgatgag
gggctggcccaacagctggtgcaggccctgcatcaaactcaaacaacccacatagaagtg
aaagacagcttggcaacagaatctctggagggagaactgcctcagcttctgaagtgtatt
ctgcgaaaggacccaaatgccttcaggacaagagccacgtttgaagctggagtgcagcag
cagacgcgtggctccgtgcatggagtgcagcaacagcaacaacaacagcaacaacataca
actccctcccactccacatcgccttatgtatctcagaacaactcgccgcggtacccccca
tccacatctggcatgttccccaatcagagtggatcataccaacagcacggcagtccctat
gctgccacctctgctgggatgacctcccctgtttcccagcagaggtccaaccatcagcgc
tacagtaactctgctgtgaatggggagtgcttctctggagacgctaaccttatcttaggc
catggatcggtgatgccggcaggacaccaacagaacaaactgccagtatcttcaccagcc
caagccacggcagccgagcgagtgcttccgcaccaaccgcagcaacaggtgtcacagccc
ccctcctcctcctatccttctggagaagacacgcgcttgagctacaaccgccgacagtcc
aggtcctcccagtcagcagcggataattctgttccctcgtcatcgcgacgtaactccggc
agcagcagagtgtcggactcttcgggtcacgccacggacagagacagtgcggcgcagagt
cgcgatggtggtgctgggttgttaggtgctcgtgttgccatggctgaaccacgggtagtg
ttagagaacattgtgcaagagagcagaggcaggctgagccactccacgcctcaggaaagt
gtgtctcacaaccagaagaaacccagaggacctgttgtcatgctggaaatgctggatcct
gcaaaaattgcctctgtaaattgtaaggattcaggagataataataaagtatcactatca
cgtggtcgcaagaccctcaaatcaattgcctcaggtggcacagtgaaagcagtctgtgat
aatgaatctcggaagcggaagcgttcccgtgacgaacctggctacagcatcatggcggag
gcaggcagcatgtcattccaggcaccaaaaaggagggcagacaggggaaggggaggcaag
aggaaaagtcagtattttgaggagagtgacgaagagtcatcagagtttgttgaaatggag
gaagaagatgaagaaacatacttggcgcggaagaggaagaaggagaagcagcggcagcga
cagcgacgcagcatggtgcccacgctcagcagtgaggagctgatggacagccccaccttc
aagaagttcaccagctgcatggaatacgtctttgacacggcggaggacgctgacctgacc
gccctggatatcaatgacgaagatgttgagtgtccgccggagcttctggtcgccaagggc
atcatgggtgacttgtgcggagagtctgccaaactgaaatccatgaatgttatgagccag
atacctcccagcaagctggtacggttgatgaccatcttgtcatggaacatcagggacgga
accaaagtcacaccatttgtcaaccaggatgaagatgaagaggagtcgcggttgtggcga
gaggtgacgatggagcgagtgattcgcagtatggacgcgtccttgacctgcctgtcggtc
atgacctccgtgtccatgcacaagatggcgtacctagaggacgtgatcgagcgcatgatc
ctgtacgccaagttccagctgcagaacactatctacccggagtttgaccccgtgtacagg
gtggatccaggggcaaaagacggttaccatggcagcctgaaagccaagcgagcgcgggcg
tccacggtgaagcacaagtccagcatcaacgtgtacaacaagatgtgcgagatggtcaac
tggttcgccgagcttctctgcatccaggagatgactgacaccatcattctgcagatgtcg
tctgttggagtgtctgcattctttgtggagaacatcagtgaactgcagctgaacgccatg
aagctggtcacaacaattttttcacgctacgacaaacacaggcagctcattttagaagac
atcttcgccagtttagcccgacttccctccagcaaacgcaatctccgcaacttcaggctg
aactctgaagagtccatacagatggtgacggcgctggccttgcagttgatacagtgtgtg
gtcaagctgcccagtgaagacgcgtcctccagacctccatcacccacagaggaatcagat
tcaaagaggcagcaaaaatctattgcaagcgacaagggaggagggaacaacgatgttgta
atcgtcacatcctatgagaccgccatgagaactgcctacaactttctcacagtcttcctc
aaaaaatgcacaaccaaaggggaggaggactacaggccgctgtttgagaactttgtccag
gacctgctgtccaccgtcaacaaaccagagtggccgtcgtctgaactcctgctcagcttg
ctgggcagaattctggtgcaacaattcagcagcaagtcaacagacacgtctctacgagtg
gcgtcactagagtacctgggtatcgtggctgctcgtctcaggaaagacgctgtctccagt
cagctcaaccaagaagtcattgacgacattgtgcacagggtgaatgaagatgatgaagaa
gaggcctcaactcgcagcaaaaagaagacgaaacatcctggagacacgatgcagagctta
caggagtccatcttggagtacctggcttacaacgggcagagtgagccagcactgcagttt
gctcgtcagttctacgtggctcagtggtaccgtgacaccacagtggaagcggagaagaag
atcaagcagcagcagaacgcgtcagggtcggacgatgaagacttcaacgagacagaggcc
gagaccaccacagaagtcatgcagaacgtggagaaacgcaaacactttcttctctcacag
attgcctccgcacaaaccaccctggccacttacaggccatctccaagcaaactggactac
gacagtgcgtgtctagtagcccgctacctgtcttccaagcgacccttcgctcagagtttt
gatgtatacctcacacagattctgaaggtgctgagtgagacggcggtagcggtgcggaca
aaagccatgaagtgcctcacagccgtcgtggagtcggaccccggcatcctggctcgaaac
gacatgcagcgcggcgtccacggccggttcctggaccagtccacttccgtgagagaggca
gcagtggaacttgtgggcaagttcattctcatccgtccagagctcattcccaagtactac
gacatgctcaacgagcgcatcctcgacacgggcatcagtgtacgcaagagggtcatcaag
atcttcaaagacatttgtatcgatcagccagactttggcaagattccggaaatgtgtgtg
aaaatgattcggagggtcaatgacgaggaaggcatcaagaaacttgtgaatgatgtgttc
caaaccatgtggttctctccggtcagcacgagggaccgagactcttccaggctgctccag
aaagtcatgaacatcacagacgttgtggcagcctgcaaagacacagggtatgagttcttc
gagcagatgttggaaaatctgctgaagaaagatgaagatggaaattacaacaagtcagcc
attcttgcctgcacacagattgtcgactgcctcgtggaaaacgttctcagaatagaagag
aaaagtgttgaaatgacggaggccaagaacacgagttccagactggtggcgtgcctgtca
acactgtttctgttcagcaagatcaagccagacctcatggtgcgccatgcaacaactctc
cagccatacctcgacatcaagtgcagttcccagagcgactacctggtgctgcactacgtg
gcgcgcatcctggagctggtggtgccgctgatggaccaccccagtgagaacttcctcatg
gcgctggaggaggacatgatcaaactcatcctcaagcacggcatgatggtggtgcagagc
tgtgtgagctgcctggggtcagtggtcaacagggtcagccacaactacacgctggtcaag
gattgcttcggcaagttcttcggggtgctgaccaagctgatgctggaccacaaggaggac
tgcaccaaccccgctctcaagggacgcaagcccacgctgctccgatcgctcttcactgtc
ggccagctctgcaggcactttgacttcgactcgaaagaaatgggggaagcgaaggtttgt
gtgcggcagaaggtgtttgatgttctgtactacttcattcaccacgaggaggaagatgtc
cagcacaaggctttgacagcccttgggttctttctgtgtcgacactacgagtacatgctg
ggcaagctgctgagggacatgtaccacgacttcctcaccaacgacaacgcccccatcaag
ctgcgctgccaggtgctcaaaaacctccagctctacctggtggaggaggaaatcaccatg
tcaaagtccgacgccgactggaaaaaacactccaagcaggaagacttgaaagagatggga
gacgttcagtcaggtatggcgagtacagtagtacagctgtacctgaaacagttgctggag
gcgttctaccacgaccactcccaggtgcgcatcacggcgctccacgttgtacagctcatt
ctgcgtcagggcctcgttcaccccgtccagtgtatgccttacctgatctgcatgagtacc
gacccagagaacgtggtgcgagtcaaagcagaccagcagctggaagaaatcgagaaaaag
taccctggattcacacatatgaaggcactgatgggcatcaagaactcataccgcctgcag
caggtcctgcacaagaacaaccccctggagcccatccggggcttccggcagacggaggag
ggccagttccaggcgctcaacggcttcctgtactcagtactgcgctccaaccgctcgcat
cgccgcggtctgctcacctccctcctcaacctcttcgacgacacagggttgcaaaggata
acgatgggggaacaggtgtatgttgccgacaacctggccttcttccccttcgtggtgcaa
gacgaacccctgtttgtcatgcaccagatcgacatcatcgtctccgtggcaggctccaac
ctcatgcagtcattcaaagagaacctgttgccaaggaaccagggcgagcagaacggaatt
caccacgaaggactcccggaagaagccagagtcaaactggcagccgaggacgatgacgat
gatgatccagactctcttatcagtcggttaccagacgacatcagtaccctccaggaaatt
atgcaacagtctcagggctgcattctactgctgatgatgaagcaacatctcaaggacatg
tatggcttgacagacagcaagatccatcgttactcccctacagaggctgcaaaggttttt
gacaagccgctgaaccgtaaaaacatcattcgcttcacgccccagcacacgctggatcaa
ctgcgctctgtctttgacgctgaccccgaggaagacgagaaacgacagaaactggtcgac
gagtacctggagttccgtgacctgatgatgagcatcgaccctgcggacgaggacgacagt
ggagacgagcagcacagcacgggagcggccacgcccagcaggaagtcgccggcccatgac
ggggatggaggtgacgccagcaacgcggccatggctgttgacggggtccacccagaggga
gaacctgtcgacggaatggagaaacccggcacgcctgtggcgaacaacacgcccaaagcc
aagctcccctactactaccacagacgagaacgctccgaacagaaaccccaccggcaccga
acgcccaagctcctcatatcctcctcaacgcccaagtccctcccgcccaagaagaagaaa
aagaagcgaaagaaggctgacgcaagtgacaatgacagtgatgatgatcctgactttgtg
ttgtag
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integrated database retrieval system
