Littorina saxatilis: 138967632
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Entry
138967632 CDS
T10665
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lsax Littorina saxatilis
Pathway
lsax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138967632
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsax01002
]
138967632
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsax03021
]
138967632
03036 Chromosome and associated proteins [BR:
lsax03036
]
138967632
Peptidases and inhibitors [BR:
lsax01002
]
Metallo peptidases
Family M1
138967632
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138967632
Coactivators
SAGA/TFTC/STAGA complex
138967632
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138967632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
DUF4820
Motif
Other DBs
NCBI-GeneID:
138967632
NCBI-ProteinID:
XP_070196335
LinkDB
All DBs
Position
LG5:complement(61141678..61179869)
Genome browser
AA seq
1303 aa
AA seq
DB search
MHTARMKKDPKVELLRQFKLAHQTLCIKAINFERKYMVGYVELTIHPLRVDLRQIKINSK
QCMIYTVMINEQWEADFQYNDPTLEICQGDGKQRNLDFYQSCHLNTMSSVNPDLSNGEMT
IDLPPQTGPLIRELRPFRMTIEFSLENPQGGVHFVLPDMEGTLAERSAHMFTIGKENSSR
LWFPCLDSYSESCTWKLEFTVDASMTAVSCGDLIDTIYAADMKTKTYHYFLSTPTAAPNI
GLAVGPFEVHVDPTMHEVTHFCLPHLTSILKHTTSYLHQSFEFYEELMSSRYPYGCYKQV
FVDESYVDGVAYATMSILSTNMLHSARIIDQTLVTRKIMARLVAEQFFGCFIAMQSWCDA
WLTKGIAGYLSCLFQKRTFGNNEYRYMVAMLVKEVSDYEQQVGGILLDPSRRESNLPFSV
KNAHTVSPRYAEMMEKKSLLVIRMLELRIGTELLLQVLNKLLALSSAAAQQKLLSGTWGN
MLISTCSFLKIIYTVTGKDILPFIEQWVHQSGCARFFGNFVFNRKRNVVELEIKQDLTAR
GGLRYVGPLTVTIQELDGSFNHTFNIEENKTKFEITCHSKSRRNKKKKIPLVTGEEVDMD
LSAMDADSPVLWLRVDPDMQLLRQVVWEQPDYMWQYQLRYERDVVAQREAIFALERYPTP
ATRLALTDTIEMEHCYYKVRTQACTCLTKVANSMVATWQGPPAMMAIFRKMFGSHSCPAI
IKQNNFTNFQHYFILKAMVSSMAYLRDVHQVCIPEILRFLLDLFKYNDNIKNKYSDNYYR
AALVDAISHTVTPAATSVSLLTGQVVSSETLSGDMKLILEEITRALNLEKLLPCYRFTVT
VSCLRALRQLQRFAHLPSDASIFRQYAQYGVFRDVRLASLDCLIDFIRTEASAEQLDYVL
SMVETDKDYYIRHRILRMLTINPPFKKLDLVQSALNTDTLVERLWKMMNCSLSFDSRLRC
GVADMYYVMYGRTRPSCLPIPESVLVLNVKEKRTTVSPTMQYAASISTQDSIKSEPSTSS
AGLVQQSVVEDCEVPMEVGGEVVVPTDSAANQNTPGPSGSKRKLDSDSTPFSESLLFAED
VVSVEEVDVKQEGEELEEGESLRKRIKIEQTEPSSPLPPTLLLPTATSTPMVPSAVSRTA
SLERMHSDSVSRLSDDSGDESSTLVQPTSLSFSSLPATPVVPSSSMSTPTSLDPSSSKLH
KSKKKKKKNKHKHKHKHKHERSDRERDGDRSERREKSRERETIQDLEGEVVRPSKEDKDA
GFVLEDVGAGPGADLFSSGGSNNNSPGPPTLVDEPSSSEFEVV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgccagaatgaagaaagaccctaaagtggagctgttgcggcagttcaaactt
gcccaccagacgctctgcataaaggccatcaactttgaaagaaagtatatggtgggttat
gtggagttaactattcatccactaagagttgacctgcgccagatcaaaatcaacagcaaa
cagtgcatgatctacacagtgatgatcaacgaacagtgggaggcagacttccagtacaac
gaccccacactggagatatgccagggggacgggaaacaacgcaatctggacttctaccag
agctgccacctgaacaccatgtcgtcggtgaaccctgacctcagcaacggagagatgacc
atcgacctgccaccacagactggacctctcatcagagagctgcgtccattccgaatgacg
atagaattttccctggagaatccacagggcggcgtgcactttgttctgcctgacatggag
ggcacgctggctgagaggagcgctcacatgttcaccattggcaaggaaaactcttccagg
ctgtggtttccgtgcctggactcgtactcggagtcgtgcacctggaagctggagttcact
gtggacgcctccatgacggccgtctcctgcggcgacctgatcgacactatctacgctgct
gacatgaagaccaagacgtaccactactttctctccacacccaccgccgcgcctaacatc
ggtctggctgttggaccgtttgaagttcacgtggacccaaccatgcacgaagtgactcac
ttctgtctgccgcatctcacctccatcctcaaacacaccaccagctacctgcaccagtcg
tttgagttttacgaagagctgatgtcgagccgctacccgtatggatgctacaagcaggtg
tttgtggacgagagctatgtggacggtgttgcttacgccaccatgagcatcctcagcacc
aacatgctgcactctgcgcgcatcattgaccagacgctggtgaccaggaaaatcatggcg
cgcctggtcgcagagcagttcttcggctgcttcatcgccatgcagtcatggtgtgacgcc
tggctgaccaaggggattgctggctacctgtcgtgcttgttccagaagagaacctttggc
aacaacgagtaccgctacatggtggcaatgctggtgaaagaggtgagcgactatgagcag
caggtgggaggtatactgctggacccgtctcgcagggaatccaacctgccgttctcggtg
aagaacgcccacaccgtgtccccgcgctatgcggagatgatggagaagaagtcgctgctg
gtcattcgcatgctggaacttcgcatcggcaccgagctgctgctacaggtactcaacaag
ctgctcgcactgagctcagcagcggctcagcagaaactgctgtcagggacgtggggcaac
atgctcatctcaacgtgctcctttctcaagatcatctacaccgtcaccggcaaggatatc
ctgcccttcatcgagcagtgggtgcatcagagcggctgtgccaggttctttggcaacttt
gtattcaaccgcaaacgcaacgtggtggagcttgagatcaagcaggacctaacggcgcgc
ggcggtctgcgctacgtgggccccctcaccgtcaccatccaggagctggacgggtccttc
aaccacaccttcaacatcgaggagaacaagacaaagttcgagatcacatgccactccaag
agtcgacgcaacaagaagaagaagatcccgctggtgacgggggaggaggtggacatggat
ctgtcagccatggacgctgactcccccgtcctgtggctgagggtggaccctgacatgcag
cttctcagacaggtggtgtgggagcagccagactacatgtggcagtaccagctgaggtac
gaacgcgacgtcgtggctcagcgggaagccatcttcgccctggagcgctacccgacccct
gccacccgcctggccctcaccgacaccatcgagatggagcactgttactacaaggttcga
acccaagcctgcacctgtctgaccaaagtggcgaactccatggtggccacgtggcaaggc
ccgccagccatgatggccatcttccgcaagatgttcggctcccactcctgtcctgccatc
atcaaacagaataacttcaccaacttccagcactacttcatcctcaaggcgatggtgtcc
tccatggcgtacctgcgtgacgtgcatcaggtgtgtatccccgagatcctgcgattcctg
ctggacctcttcaagtacaacgacaacatcaagaacaagtactccgacaactactaccgg
gccgctctggtcgacgccatctctcacaccgttacccctgccgccacgtccgtctctctg
ctcactggacaagtggtgagctcagagacgctgtccggagacatgaagctgatcctggaa
gagatcacgagggcgctgaacctggagaaactgctgccgtgctatcgcttcacggtgaca
gtcagctgcctgcgggcattgagacagttacagcgattcgctcacctgcccagcgacgcc
agcatcttcagacagtacgcacagtacggtgtcttccgcgatgtccgtctggcctcgctt
gactgtctcatcgacttcatcaggactgaggcgagcgcagaacaacttgactatgtcctg
agcatggtggagacagacaaggattactacatcaggcatcgcatcctccgtatgttgacg
ataaacccgcccttcaagaagctggacctggtgcagagtgcactcaacacagataccctg
gtggagcgactgtggaaaatgatgaactgtagcctgtcgtttgacagtcgtcttcgctgc
ggcgtggcagacatgtactacgtgatgtatggacgtactcgcccgtcctgcctgccaatt
cccgagagtgtgctggtgttaaatgtgaaggagaagaggaccaccgtcagccccaccatg
cagtatgctgccagcattagcacacaggactcgataaagtcggaaccgtccacaagctcg
gcggggctggtgcagcaaagcgtggtggaggattgtgaggttcccatggaggtggggggg
gaggtggtggtccccacggattccgccgccaaccaaaacacaccggggcccagcggatcc
aagcggaagttggattcggattcgacgccgttcagcgagtcgctgctgtttgcggaggac
gttgtgtcggtggaggaagtggatgtgaagcaggagggcgaggagctggaggaaggagag
tcgctcagaaaaagaatcaaaattgagcagacagaaccgtccagccctctccctccgacc
ctactgctgccgacagcgacatccacacccatggtgccatcggcagtgtcgcgcacagcg
tcactggagaggatgcacagcgacagtgtcagtcgcctcagcgacgattctggggacgag
tcgtccacactggtgcagccaacatccctgtcgttttcatcgctcccggcaacgcccgtc
gtcccatcatcctccatgtccaccccgaccagccttgacccttccagtagcaagttgcac
aagtccaagaagaagaagaagaaaaacaaacacaagcacaaacacaagcacaagcacgaa
cgcagtgacagggagagagacggcgaccgctcagagcgacgagaaaagagtcgcgagcga
gagacgatccaagacttggagggggaggtggtgcggccgagtaaggaggacaaagacgcg
gggttcgtgttggaagacgtcggggcgggtccgggggccgatctgttcagttccggcggc
agtaacaacaattcccccggtccccccactcttgtggatgaacccagttcttcagagttt
gaggtggtgtga
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