Littorina saxatilis: 138967735
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Entry
138967735 CDS
T10665
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138967735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138967735
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138967735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF7491
GAS
RBD-FIP
HALZ
Motif
Other DBs
NCBI-GeneID:
138967735
NCBI-ProteinID:
XP_070196491
LinkDB
All DBs
Position
LG5:complement(32310837..32377341)
Genome browser
AA seq
2407 aa
AA seq
DB search
MAGTTMLSNALDLNELNALSPGVKYKLEVAIGSKVSALEELSGKYEKLRVNSEQQYFELE
KQLINTNSQLETETSTKTELQTRLAEIEKEHNEAKTRLQQQDGEIGTMRTKQLELSNANQ
LLQAEKRDLNSFLEKREKDVQRLKDDLKELMDKVDTANKDKCNAQAELMKAQSSDLSRQY
HEKRLQQEKDQLQKQVDWLNTQLSDKTKEFVTFRREKAGKMLELQGGLEEKTEEIAHLQA
TIEALKSSKEEQATKIESLAQKLKEARDLQTTADEQYRQELSAQSRLVNLYKTSTEENNK
KITELTRAVEELQKLLKEANTAYLDLEASKSEEIEKLNDEVRERELNVERLEEELRNAND
LLAAKKSGSFSVSQDELETMYPAAAATSKLLKSGMTLTQIYSEYVQAVENLEAQKEDNKR
LNSYLEQILQEIEDKAPQLKKQREDYEAALQALDQLTPQLDAAMLECEKLRSDNEELKRR
AGYFQRENTRIQQRNIDLGRQVKFLLKEIQELKGGCVVQDGEAEVSSSQDVSSSSRIITE
KLVTFRSIEEMQEKNQQLLESLRDLSKKREEEDSEATDSRVRELKQQLEIASQELEQLRG
DRTRQAEMVEAIVRQRDMYRVLLQQGGSTPISPGQQPLTSTPMPSSGRGSGQADRSVGDM
DKELNEARMALKELQAEYNTYRKEKMENERILNEQLEKIRNELSESRVQNAKVASQVDHA
AERYKILQNNAESYRKEIAALQDKCQKYSTSVAKHELTISKVKEDVFEKQQLASTWEAKV
DNLRTQYDQLRSHEQRLIAEVESMRRERQSNAMLTANLQAIQNNLERADFESKSRYTNQI
DSLEKEVALLRRKLECAEEEKTSTVNSLETRLKSAQTELAKAREMQEELKTETQKAKKEM
QDNLQELSATEAKLAAAENKLSNLGTSEGGMPADEEMKDLRAEIAQMKEHMKNLQTQLKA
SKQQADQYKSIAEGVEQNLRQSNQTSKEFQETCETKMIEAQNAKAALEKRVEELEKDHQE
LLNENIRITEDSHNLNNDLRKQLASLRHELQEAMQMRETAVADQTKAQQALQEQVQLASE
AQDKYQRELMLHAADVEALTALKKQLESHNDDLAKLQSQLQGEQQKFLNAQTSWQEQERV
LREECKQMETRSAELEKQNATLHTQMETLSNQAISLQQKASDNPLNLSLSEEAGKSSEQL
LEVVKFLKREKEIAETKLEVAESSSSRSQQRLTLLERQLEETKQSLSEERQQNQASVQTM
SQHMELMSKVETVNLLQESNKMLREDNNRMQAQLQELEAKVRKLEEEISPLQASTRELAA
QKEVLEVEKKTLMAEMERWKSRTHHLVEQSNKTDPEEHRKLMQEKEQIRKQLAQTKEELF
RVKAELSRINSLVASRESDLNTQRQEMSKQTEELQEAKRLLDEEQKEGEKKNTTINQLKK
IGRKYKEQSEATQKELDHLKAASAGQQTQQSTAAAAAEQVNKQLTDKLAAIERERDEVRA
QVTQKDTEVNSLKEQVQKIQQELSAHQENLQKQQAESSRLQGECSKLQAESAEFERKQTQ
TRSVLQSARTKITQQKEQIDRLTAENTEIKRAAPGAGQVSREESGQEVAAVRLQMAQLQR
DLEEARRGSESLTGGQAAEQERLAVENAELHSKVQQLQRQVEMLPKSSPAQPAQPMPRQP
AASGTSPTSTETPKMASVKPVATAAAAAAMQHTSSQAKATASIRPMAIASANTSSAGLPP
YPSTSSTPPIVTVMPTTAVQPEPQQDEQPSTSGLQQQSSIPAASVTGRPQQQVQIVAPQI
ESVEPSTSVEETTTQAVVAPSIQEPVHAVQSAQQQQQQQQLQQQQQQQQQQLQQQQQQQQ
QQLQQQHQQQQQQQLFQASTSAAPGPSTSGEQPPMLFGKRTRDETEISDETEAKRSRVTS
TQEAAVIPTITVMDENSKLVTHIEPQQESVAATDMSSVEQIEEEVQEIQEEGDMQSQEVG
GQDDDSGDIIVVNSDEEGGEMEGQDLEEGQQDNPLEEEEVEDETEEEGESEEMDDEEYDE
EEGEEVEEEGMPGEGAEDEDDDNDVVIIDIDENETPAASMPSQSLEAEEDVVTGCVSTTT
SSPRPPPPPLQPIPAHTERLPSTSRQLTPFLVGQGGAFDEDDCMVPSTPTLSMPRRNDGF
AEALNSPHVAQRFVFSGGAEGANQPELAQLESQRALGMDDTRMDLSQFDEGGARSIPTTP
IPQQPSAPVSFESGITGATSGTQPTTTQEATSVTTTGEIAAGGEGQGQPEGVEQEEEGTS
EVTEGQQEEESEASLLEGGAGDDDESEDSMTSSSLDSHKNINRPRIQRIVWDAPQSSANP
AGASTSVPQQQPQPAARGTRSRGLRRGAVPTRGAPWRGGPRGGGQQPPPRGMGAMRRGVP
RGGFRGF
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacgactatgctttcaaatgctctcgatttaaatgaattaaacgccctttca
cctggtgtgaagtacaaactggaagtagcgattggttccaaggtatctgcgctcgaagaa
ttgtctggaaaatatgaaaaacttcgcgtaaattcagagcaacagtattttgaactcgaa
aagcagcttatcaacaccaacagtcagcttgaaacagaaacgtccaccaagactgaactg
cagaccagacttgcagagattgaaaaagaacacaatgaagccaagactcgtctgcaacaa
caagatggagagatcggtaccatgcgtactaaacagctggagctttcaaatgcaaaccag
cttcttcaggcagagaagcgcgatctcaacagttttctggagaagcgcgagaaagacgtc
cagcggttgaaagatgacctgaaggaactgatggacaaagtggacacagcaaacaaagac
aaatgcaacgcacaggcagagttgatgaaggcccagtcatctgatctgtcaagacagtat
catgagaagcgtctacaacaggaaaaagaccagcttcagaagcaagtcgactggcttaac
acacaactgtcggacaaaaccaaagagtttgtcacattcagacgcgagaaggcaggaaag
atgctggaactccaaggaggtctggaagaaaagaccgaagagatcgctcatcttcaagct
accattgaagcactcaagtcatccaaggaggaacaggcaacaaagattgagtcacttgca
caaaaactgaaagaggcacgtgatcttcagacaacagcagatgagcagtaccgacaggaa
ctgtctgctcagtccaggctggtcaatctttacaagacatcaacagaagaaaacaacaag
aagatcacagagctgacaagagcagttgaagagttgcagaaacttttgaaagaagccaat
acagcatacttggatctggaggcgtcaaaatctgaagagattgagaagctgaatgatgaa
gtgagagaaagagagctgaacgtagagaggttggaagaggagcttcgcaatgccaacgac
ctgctggcagccaagaagtctggatcgttttctgtgagtcaagatgaactggagaccatg
tatccagctgctgccgccaccagcaaacttctcaagtctggcatgactctcacacagatc
tacagtgaatatgtgcaagcggtggaaaacctggaggcacagaaggaagacaacaaacgc
ctcaattcctacctggaacagattctgcaggagatagaggacaaagcacctcagttgaag
aagcagagggaagattacgaagccgccctgcaagcactggaccagcttacaccacagctt
gatgctgccatgctggagtgtgaaaaactgcgatcagacaatgaggagctgaagcgtcgt
gctggttacttccagcgagaaaacactcgcatccagcagcgcaacattgatctcggcaga
caggtgaagttcttgttgaaagagatccaagagctgaagggaggctgtgtggtgcaggat
ggtgaggcggaggtatcttccagccaggatgtgtcaagctcctctcgcatcatcactgag
aaactcgtcaccttcaggagcattgaggagatgcaagagaagaaccagcagcttctggaa
tccctacgagacctgagcaagaagagagaggaagaagactcagaagctacagattcaaga
gtaagagagctgaagcagcagctggaaatagccagtcaggagctagagcagcttcgtggg
gatcgcacacgccaggcagagatggtggaagccatcgtacgtcagcgagacatgtacagg
gtccttctgcagcaaggcggatctacccctatttctccaggtcaacagccgctgacatcc
acacctatgccgtcatcaggcagaggctctggccaggcggacaggtctgtgggcgatatg
gacaaggagctgaacgaggctcgcatggcactgaaagaactgcaggctgagtacaacact
tacaggaaggagaagatggagaatgagaggatcctgaatgaacaactggagaagatacgc
aatgagttgtctgaaagccgtgttcagaacgccaaagtagcttctcaggtggaccatgca
gctgagcgctacaagattctgcagaacaatgctgagagctacaggaaggagatagcggca
ctgcaagacaagtgccagaagtacagcacctctgtggccaagcatgagctgaccatctcc
aaagtgaaggaggacgtcttcgagaaacagcagctagccagcacctgggaagccaaagtg
gacaacctgcgaacacagtacgaccagttgcgctcgcacgagcagcgattaattgctgag
gttgagagcatgagacgtgagcggcaatccaatgccatgctgacggccaatcttcaggcc
atccagaacaacctggaaagagcagactttgagtccaagtcacgctacaccaaccagatt
gacagcctggagaaggaggtggccctgctgcgaaggaagctggagtgtgcggaggaggag
aagacaagcaccgtcaactctctggagactcggctgaagagtgcacagacagagcttgcc
aaggcaagagagatgcaagaagaacttaagacagaaacccaaaaggccaaaaaggagatg
caagataacttacaagagctgtctgctacagaggctaaacttgcagcagcagaaaacaag
ctgagcaacctgggaacatctgaaggtggcatgccagctgatgaagaaatgaaggatctg
agagctgaaatagcccagatgaaggagcacatgaagaatctgcaaactcagctgaaggca
tccaaacaacaggctgaccagtacaagtccatcgcagagggtgtggaacagaacctgaga
cagtctaaccagacgagcaaagagttccaggagacttgtgagaccaagatgattgaggca
caaaatgccaaggcagcccttgagaagcgcgttgaagagctggagaaagaccaccaggag
cttctgaatgagaacatccgcatcactgaggacagccacaacctgaacaatgatctgaga
aagcagttagcgtcactgcgtcatgagctgcaggaggccatgcagatgcgagaaacagcg
gttgccgatcagaccaaggcacagcaagccctgcaggaacaagtacaactggcttctgag
gcccaagacaagtaccagagggagctgatgctgcatgcagctgacgtggaggctctgacg
gccctgaagaaacagctggagagtcacaacgacgacctggccaagctgcaatcacagctc
caaggagaacagcagaaattcctcaacgcacagacctcgtggcaagaacaagaaagagtg
ctgcgtgaggagtgcaagcagatggagacacgaagcgctgaactggagaaacagaacgcc
acactccacacacagatggaaacgctgagcaaccaagcgatctcgctgcaacaaaaggcg
tccgacaatccactcaacctgtctctgagcgaggaagctgggaagagcagcgagcaactt
ctggaagtcgtcaagtttttgaaaagagagaaggagatagcagagaccaaactggaagtg
gcggaatcttcatcttcgcgttcccaacagcggttgacattgctggagaggcagctggag
gaaaccaaacagtcactcagcgaggagagacaacaaaaccaggcgagtgttcagaccatg
tctcagcacatggagctgatgagcaaggtggagacagtgaatctgctgcaggagagcaac
aagatgctgagggaggacaacaacaggatgcaggcacagctgcaggagttggaggcaaag
gtgaggaaactggaggaagagatcagccccctgcaggcgtcgacgcgagaactggcggcc
cagaaggaggtgctggaggtggagaagaagacgctgatggcggagatggagcgatggaag
tcacgcacgcatcacctggtggagcagagcaacaagactgaccctgaggaacatcgcaaa
ctcatgcaagagaaggagcagatcagaaaacaacttgcacagaccaaagaagaacttttc
agagtcaaggctgaactgtccagaattaactctcttgttgcaagcagagagtctgatttg
aacactcagaggcaggaaatgagcaagcagactgaggagctacaggaggcaaagagactg
ctggatgaagaacagaaagaaggggagaaaaagaacacaaccatcaaccagctgaagaag
attggccgcaaatacaaggagcagtcggaagccacacagaaggagcttgaccaccttaaa
gccgcctctgctggtcagcagacccaacaatccacggccgccgccgcagcggaacaggtc
aacaaacaactgacggacaagctggcagccattgagcgggagcgagatgaggtcagggcc
caggtcacgcaaaaggacacggaggtcaacagcctgaaggagcaggtgcagaagatccag
caggagttatccgcccaccaggagaacctgcagaagcagcaagcagagagttccagactg
caaggagagtgtagcaaactgcaggcggagagtgcagagtttgagaggaagcagacccag
acccgcagcgtgctgcaaagtgcacgcaccaagatcactcagcagaaagaacagattgac
cgcctcactgccgaaaacaccgaaataaagagagctgccccaggtgccggccaagtgtcc
agagaagagagtggccaagaagtagccgcggtcaggttgcagatggcacagctacagcgt
gaccttgaggaggccaggcgggggtcagagtcgttgaccggaggtcaggcagcagaacag
gagagacttgctgtagagaacgctgaactgcacagcaaggttcagcaactgcagcgtcag
gtagagatgctgcccaagtcctcacccgcccagccagctcaacccatgccacgccagcct
gccgcctctggaaccagccccacctcgacagagacccccaaaatggccagcgtcaagcca
gtagccactgcggcagcggcagcagccatgcagcacacatcctctcaggccaaggccacc
gccagcattcgaccaatggccatcgcttcggccaacaccagcagtgccggcttgcccccc
tacccctccacctcctccacccctcccattgtcactgtcatgcccaccactgcggtacag
ccggagcctcagcaagacgagcaacccagcacatcgggtcttcagcagcagtcgtctatc
ccagcagcctctgtgactggtcgcccacagcaacaagttcagatcgtcgcaccacagata
gaatcagtggaaccgagtacgtcggtggaggagacaacaacccaggcagtggtagcaccc
agcatccaggagcctgtgcatgctgtgcaatcagcacaacaacaacagcaacaacaacaa
ctgcagcaacagcaacaacaacagcagcagcaactgcagcagcaacaacaacaacaacag
cagcaactgcaacaacagcaccagcagcaacaacaacaacagctgttccaagcttccacc
tcagcggctcctggaccctctacgtccggagaacagccacctatgctgtttgggaagagg
actcgtgatgagacagaaatttctgatgaaacagaggccaaacgttccagagtgacttct
acacaggaggcagcagtcataccaactatcacagtgatggatgagaattccaagctggtg
acccacattgagccacagcaggaatcggttgccgccaccgatatgtcttctgtggaacag
atagaggaagaggttcaggagatccaagaagagggagacatgcagagccaggaggtcggg
ggtcaagatgacgacagtggagacatcattgtagtcaacagtgacgaagagggaggagag
atggagggtcaggatttggaggagggccagcaagacaatccactggaggaggaggaggtg
gaggatgagacagaggaggaaggggaatcggaggagatggacgatgaagaatatgatgag
gaggaaggggaggaggtagaggaggagggcatgccgggtgaaggggcagaagatgaagat
gacgataatgacgtggtcattattgacattgacgaaaacgagacgccggctgcctctatg
ccttctcagtctctggaagcagaggaggatgtggtaactggctgtgtttccaccacaacc
tccagccctcgacctccacctccacctctccagcctatacctgcccacactgagcgtctc
ccttccaccagtcgacagctgacacctttcttggtgggccagggaggagcatttgacgaa
gatgactgcatggtgccaagcacacccaccctctctatgcctcgtcgtaacgatggattt
gctgaggcactcaactcgccccatgttgcccagcgctttgtgttcagcggaggcgcagag
ggtgccaaccagcctgaactggcccagctcgagtcacaaagagcactgggtatggatgac
acaaggatggatctgtcacagtttgacgagggtggggctcgtagcatccccaccaccccc
atcccccagcagccctctgcaccagtgtcttttgaaagtggaataaccggtgcaacatca
gggacacagccaaccacaacccaggaggctacttctgtgacaactacaggtgaaatcgca
gccggaggtgaaggtcaaggtcaaccagagggggtcgagcaagaggaagaagggaccagt
gaagtgacagagggccaacaggaggaagagtcggaggcctctctactggaaggaggagca
ggggatgacgatgagagtgaagactcaatgaccagtagcagtttggacagtcacaagaac
atcaacagacccaggattcagcgcatcgtgtgggacgctccccagtcctccgccaacccg
gcaggagcatccacctccgtcccgcaacaacagcctcaaccagccgctcgtgggaccaga
agtcgaggcttgagacgcggggctgtccctacccgaggagcgccatggagggggggaccc
aggggaggggggcagcaacctccacccagagggatgggggccatgaggaggggggttcct
cgagggggctttagagggttctaa
DBGET
integrated database retrieval system