Littorina saxatilis: 138968253
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Entry
138968253 CDS
T10665
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138968253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138968253
03036 Chromosome and associated proteins [BR:
lsax03036
]
138968253
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138968253
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138968253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
DUF5832
Motif
Other DBs
NCBI-GeneID:
138968253
NCBI-ProteinID:
XP_070196916
LinkDB
All DBs
Position
LG6:complement(1351112..1400249)
Genome browser
AA seq
1858 aa
AA seq
DB search
MFGSKLGGFGTTTSSFGTATPFGGGQATTGFGGSAFGAQTPASGGLFGAPSTGTTGGLFG
QQAASSFGQQQQQQQPSTGFNFGTPSNTSTASGGLFGQQSSGLFSTPQAGSAFGTKPQGF
GGFGTTQTASTGGGGLFGSTTQQPSTGGASLFGQPSGGLFGSTPGTGAAGGTTIKFNPPS
GQDTMSKSGVTTNINTRHQCITAMKEYENKSMEELRMEDYTANRKGKQAGTATSFFSQPA
PQATQAGNTGFSFGQPAAASTGGFSSFGSGGTVTSTGGLFGGTKPLFGPTATATATTQSG
FSFGSAAPAQTGSVFGQAKPLFGTPTSTPQTGGMFGTSQQSAFGTSTAFGASTGFGATGS
TGGGLLGSKPMGFGTTTTASTGFGVGGGSLFNKPAASSAFSFGPTGNTGFGGGTTGGSLF
GAGKPGGFGAPTGLGAGSSFGTGLGTTGTTGGMFGNPQAKTGFNFNPAGTTGTFSLGGTS
TGGLLGGNAATLGTTTSTTSNTAAELQQQLLAVSPYGDSPLFWNLKNQNAGKREEILKPT
NPAAQKAVLSSGGYKVSPRPVAKIKPKSLHSLLSGSKGQLFDNLDNEEDLGFGGETFVPR
RSVKKLVLKKGGGGGGSIMSRSVSDGRNSPQPVNQNVTPITRQLQQQGQGDDADRGDTIT
LNRLSDIPPPRNDDHQLRERGSMDDTIESLYPRLPESNTGGNLYPRLPESTDFRGQERDE
YDRSRESNHAEQDVTYDGNVTNSNLSNASLDPLPVDGPPHPAGIRLTRPGYYTIPSMDEL
AHMLDKDGNCLVEELTIGRENYGSVFFYGVINVAGLDLDSIVHFRRKEIVVYPDDSSKPP
VGEGLNRRAEVTLNFVWPTDKTTRQTIKDPERLIAMNYQEKLENISSRMNAKFIDYRPET
GSWVFEVPHFSKYGLVEEDDEQIEPTEQEKKKLKTLEEQQRAVQKQKIKMFKAKKQAQKG
KGVVGMAMAEAGEMGATAMMGEGEEEEDEEGVEMLPDITQEQFPSDMMTETMEDDEQTQP
GSLPLRLGVSARNVQLMKASFFTEEMVEGDKESLHEERSPWYRGEGVMLKSGEKAMPSLF
NTSLGIKQSLTPRSMSPDPKEMMMREKKSLFQATFGQTTFGRPPPASLHLPPTEHKLISS
GLMEDDVPRKIVGLRVQHEVPELSESLVYHKQKVSVDAACFMGRSFRVGWGPGWTLVHAG
NPCMSEEEGESNKQSAYSLLPSIGGGQSQSRRKAWTVSLEQLNVSDFFHPADAVIRKSHE
QLLEIALANSRVGKEAGCPVAAPAPSTDALHRYADNSAANTVLESHGDAGTQLQMRLVWQ
LCVALWGNPPELEEDTERGGYTECQARREALSRWLTSAAQTKIQSEVSASAHKTEGHLEG
IMAHLSGRQVGEACSLAQDAGDDRLALLLAQAAGSNVPRQMVAVQLAKWAEMGVTEFIRE
QRQRVFCLLAGLLIWDGPQSVNTCCGMDWKRALALHLWYHCQPNAPIPQALKHYENAFKG
TEDTRSYAAPPLPPYLEESAGLDLDLLKDSDVDGSRVLDACYHLLKLFCQKGYPLETILN
PTCVTANSLDHRLSWHLQCVLQALDFHHLSPHSRASLHANYASQLESVGLWHWAVFPLLH
IHHPTQREHAIRQLLGRHVQLSEKDAYLELERFMVDNLSIPPEWIHDAKATKAHYLREHK
EEATHLLEAGRWNEAHQVIVTHLAADAIVNDNHSDLMEFLDVLAAPERSVAILNWNTCGK
VFYDFIVLSRHMVILQQSPNEVTPYDLEHLKSEVRSLCGRVRHLPCLCALDRHCQSLMAS
QAMTMLRTILLHAAATMETGAAATDLLAQTLSGLPLPEDYALQELRDLTRSHLMEVLS
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcaaagctgggtggctttggtacaaccacatcttcctttggaacagctacg
ccttttggtggtggtcaagcgaccaccgggtttggaggttcagcctttggcgcacagacg
cctgccagcgggggtctgtttggagcaccttccaccggcacgactggaggcttgttcggt
caacaggcggctagcagctttggtcagcagcagcagcagcagcagccgtccacaggattc
aattttggcactcccagcaacaccagcacagcctctgggggactgttcggacaacagagc
tccggtctcttctccacgccacaagctggatccgcttttggcaccaagcctcagggcttt
ggaggttttggcaccactcagaccgccagcaccggaggagggggtttgtttggcagcacc
acccagcaaccaagcaccggtggagcgtccttgtttggccagcccagcggtggcttgttt
ggctcgaccccagggacaggggctgccggtggaacgaccatcaagttcaacccaccgtca
gggcaggacaccatgtccaagagcggagtgaccaccaatatcaacacacggcaccagtgc
atcacggctatgaaggaatatgaaaacaagagcatggaggagctgagaatggaggactac
acagccaacaggaagggaaagcaggcaggaacagccacaagtttcttcagccagccagct
cctcaggccactcaggccggcaacacgggtttctcctttggtcagcctgctgccgcgtcc
accggaggcttctctagttttggtagcggaggcaccgtcaccagcacaggggggctgttt
gggggcaccaaacccctgttcggacccaccgcaacagccaccgccaccacccagtccgga
ttttcttttggctcagccgctcccgcacagacaggctccgtctttggtcaggcaaagcct
ctgtttggtactccgacatcaaccccacagaccggtggaatgttcggcaccagccaacaa
tcagccttcggcacgtccacagcattcggagcctccaccggctttggcgcaacaggatcg
acagggggaggcctgctgggcagcaaacccatggggttcggaacaaccacgacggcatcc
acagggttcggggttggtggtggcagcctcttcaacaaaccggccgcctcctctgctttc
tcctttggcccaacgggcaacacaggatttggtgggggaacaacaggtggtagtttgttt
ggagccggcaaaccaggtggatttggagcgccaactggtctgggagctgggtcctctttt
ggaaccggcttgggcaccaccggcaccacggggggtatgttcggcaacccgcaggctaaa
actggtttcaacttcaaccccgcagggactactggaacgttttccctgggaggtacctcc
actggtggtttgctgggtggaaatgcagcaactcttggaacaacaaccagcacaaccagc
aacacagcggcagagcttcaacagcaacttctggccgtctcgccctacggtgattccccg
ctcttctggaatctcaaaaatcaaaatgctggaaagcgtgaggagatcttgaaacctacg
aacccagcagcccagaaagccgtgttgagttccggcggttacaaagtcagccctagacca
gtggcgaagatcaagcccaagtctctgcacagtctgctgtctggcagcaagggccagctg
tttgataatctggacaacgaggaagaccttgggtttggaggcgagacgttcgtcccccgg
cgcagcgtcaagaagctggtgctaaagaaaggaggagggggaggaggcagcattatgagt
cgctcggtctctgatggtcgcaacagccctcaaccggtcaaccagaatgtcactcctatc
accaggcaattacaacagcaaggtcaaggtgacgacgcagacaggggggacacaatcaca
ctcaaccgtctgtccgacatcccccctccaaggaatgacgaccatcagctcagagagcgc
gggtcaatggacgacacgattgagagcctgtaccccagattaccggagtccaacacaggt
ggaaacctttatcccaggctgccagagtctacggatttccgaggccaggagagagatgag
tacgaccggagccgagaatcaaaccatgcggaacaggacgtcacctatgatggaaatgtc
accaacagcaacctgtccaatgcctcgcttgatccgttaccagtggatgggccccctcac
ccggcggggatccgcctgacccggcccggctactacaccattccgtccatggatgagctg
gcgcacatgttggacaaggacggtaactgtttagtggaggagctgaccatcggccgcgag
aactacggcagtgtcttcttctacggcgttatcaacgtcgccggtttggatctggactcc
atagttcatttccgacgcaaagagattgtggtgtacccagatgacagctccaagccccct
gtcggagagggtttgaaccgacgcgctgaagtcacgcttaactttgtgtggcccactgac
aagacaacacggcagactatcaaggatcctgagcgactgattgcaatgaactaccaggag
aaactagagaacatttccagccggatgaacgccaagttcattgactaccgccccgagaca
gggtcctgggtctttgaggttccacatttctccaagtacgggcttgtggaggaggacgac
gaacagatcgaacccaccgagcaggagaaaaagaaactgaaaactctggaggaacagcag
agagctgtgcagaaacagaagatcaagatgttcaaagccaagaagcaggcgcagaaaggg
aagggagtcgttggcatggcgatggcggaggcgggggagatgggggctacggccatgatg
ggagagggggaggaggaagaggatgaggagggggtggagatgcttccagacatcacccag
gagcagttcccctctgacatgatgacggagacgatggaggatgatgagcagacgcagcct
ggttccttacccctgcgactgggcgtgtctgcacgcaacgttcagctcatgaaggcctca
ttcttcacggaggagatggtggagggggacaaagaatcgctgcatgaagaaagaagcccg
tggtacagaggagagggtgtgatgctgaagagtggagagaaagccatgccgtcgcttttc
aacacgtcgctaggaatcaaacagtcgctgacgcctcgctccatgtcgccagaccccaag
gagatgatgatgagagagaagaaaagtcttttccaagccaccttcggccagacaacgttc
ggccgcccaccacccgcctctctgcacctcccgcccacagagcacaaactgatcagcagc
ggtctgatggaagacgacgtccctcgcaagatcgtgggcctgagggtgcagcacgaggtg
ccggagttgagtgagtcgctggtgtaccacaaacagaaggtgtcggtggacgctgcctgc
ttcatggggcgctccttccgcgtgggctgggggcccggctggaccctggtgcatgctggg
aatccttgtatgtccgaggaggaaggagagtccaacaagcaatcagcgtattctttgctg
ccgtccattggaggcggtcagtcccagtctcgcaggaaagcctggacagtgtccctggaa
caactcaacgtgtccgacttcttccatcctgctgatgctgtcatcaggaagagccacgaa
cagctgctggagatagcgctggccaacagccgtgtggggaaggaagcgggctgccctgtg
gccgcccccgcccccagcacggacgccctgcaccgttacgctgacaactctgccgctaac
actgtgctggagagtcacggtgacgcagggacccagttacagatgagactggtgtggcag
ctctgtgtggcgctgtggggaaaccctcctgaactggaagaagataccgagcgtggtggc
tacacagaatgccaggcgcgacgtgaggccctgtccaggtggctgacgtctgcagcacag
accaagatacagtcagaagtgtccgcttcagcacataagactgaaggtcaccttgaaggc
atcatggcacacctgagcggccgtcaggtcggtgaagcgtgcagcctggcacaggacgct
ggagacgaccgcctggctctgttactggcccaggcagcggggagcaacgtcccgagacag
atggtggccgtgcagcttgcaaagtgggcagagatgggggtcacagagttcatcagggag
cagcgacagagagtgttctgcttgctggccggtctgctgatctgggacggacctcagtcg
gtcaacacgtgctgtgggatggactggaagcgagccctcgccctgcatctctggtaccac
tgccagcccaacgcccccattccacaagccctcaagcactacgaaaacgccttcaaaggc
acggaggacacacgatcctatgcagctccacccctgcccccgtatttggaggagtcggca
gggcttgaccttgacctcttgaaggacagcgacgttgacgggagccgcgtgttggatgcc
tgctaccacctgttgaaactgttctgtcagaagggataccctctggagaccattctcaac
cccacctgtgtcaccgctaacagtctcgaccaccgtctgagctggcacctccagtgtgtc
ctgcaggcattggacttccaccacctgtcgcctcacagcagggcgtcactgcacgctaac
tacgcctctcagctggagtctgtcggactgtggcactgggccgtcttccccctgcttcac
atccaccaccccacacaacgagagcatgccatcaggcagttactcgggcggcacgttcag
ctgtcggagaaagatgcctacctggagctggaacgttttatggtggacaacctcagtatc
cctcctgagtggattcatgatgccaaggcgaccaaagctcactacctgcgggaacacaag
gaggaggccactcacctgttggaggcgggacgctggaacgaggctcaccaggtgatcgtc
acccacctggcggccgatgccatcgtcaatgacaaccacagtgacttgatggagtttctg
gatgtgctggcggcaccggagcgcagcgtggcaattctcaactggaacacttgcggcaaa
gtcttctacgatttcatcgtcctgtcgcgacacatggttatattgcagcagtctccgaat
gaagtgaccccatatgacctggagcacctgaagtcggaggtgcgcagtctgtgcggccgc
gtgcgtcatctgccctgcctgtgtgcgctggaccggcactgccagtcgctgatggcgtcg
caagccatgaccatgctgcgtaccatcctgctgcatgctgccgccaccatggagaccggt
gctgcagccacagacctgcttgctcagacgctgagcggcctgcctttgcccgaggactac
gccctgcaggagctgcgtgacttgacccgctcacatctcatggaggttctcagctga
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