KEGG   Littorina saxatilis: 138968326
Entry
138968326         CDS       T10665                                 
Name
(RefSeq) protocadherin-1-like isoform X1
  KO
K16498  protocadherin delta 1
Organism
lsax  Littorina saxatilis
Pathway
lsax03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:lsax00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    138968326
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsax01009]
    138968326
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lsax04515]
    138968326
Protein phosphatases and associated proteins [BR:lsax01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     138968326
Cell adhesion molecules [BR:lsax04515]
 Cadherins
  Protocadherins
   138968326
SSDB
Motif
Pfam: Cadherin Cadherin_2 SCIMP TMEM154 DUF5527 Tmemb_9 EphA2_TM
Other DBs
NCBI-GeneID: 138968326
NCBI-ProteinID: XP_070196981
LinkDB
Position
LG6:complement(4494656..4638946)
AA seq 1263 aa
MKTTYKMIRLVSLVTLALLVQSQSQDFFRLTYNITEEQEPGIFVGNTALDTGLFNSANSQ
DFQDLKFELFASGDDNAKFFSIDEQNGVVRTKARIDREAVCGNEVDCTMILNMGVYRKTS
QDGEFDFYRSIEVVVRVEDRNDNAPEFPQKVVTLALPENMPAPYKLYTSVATDPDKEGPN
SNITYDFESTSDIFSLEVERNPENGLTDLIVKVNQMLDREAADSYYVRIVASDGGSPRQS
GSVLINIAVTDRNDNAPVFMSSNYTVNVNENASIREPILIVSAVDQDINDNGQVLYKLGA
RVDDEIKQHFQIGETDGKVYLTRPVDFETKDKFVFVIDALDRGNPPQSSSAYIIVNIIDV
NDNAPEIFLNLSPDGTDITEHEPAGKFLGHFSVSDQDSGVHGDVVCEIDDPNFRLDPFEG
QPNVYKIVLAMPLDHEDLPRRQVAIRCRDSDKNPLLATKTFEVKVLDINDNAPHFHTATF
RGSVMENEAPATNVVQQTLTDASGSSNVLRIVAEDLDSGDNGRVTYSIPVPTNFSIDALT
GTLSTLVTFDREVQAQYTFPVVAEDHGESPLSATATVIITIQDKNDHPPKFAQPIYFLDV
QENMEPGSVCGTIMALDEDSGSNARVVYSIVRDDDSSRFFSVNRDTGEVTTNQLLDRETR
DSYSFTLEAQNPSNADFRDTTRVMVSVVDDNDHPPVISNPSPTNNTITLPNNTTVGSLIL
RVRATDGDDPKDTSFEYTIPGSAKGSLFQVITVTGELILAREIRPQDAKTHELLIVVSDG
GSNPRSATATLLVTIPAEGMPAAATANILNEPNVIIIVVIIVVTLLVAILVFIAICCIYR
RDRKRTAGRQQQRHVKDKMYQAAHWVSTHSLPPGDPNGSPVHETSRSSDGMGDKKGKKEV
SFSLDEDMEKEGDPDTSGSLGSVFSAPTSGAPDNNNLKPPGDGRFITFISGKTSPGSLTA
PYESSDGHTYHNTPIAETDSPWFQDHLHMQLDRPGGEDALSASSGETGTDSGRGGSEDEA
HSNRGSSLDTDSRSFHPAQSHSSGYSSFSSADRGRRKPPSLSSLPEEHHHHLPHPLQHHP
ANDHALHPNPQHHNYFRSSHEQLPTHGLGYPAGCSRNYSFNHAMPGTKSNTIGGSSGSAA
GEANNGDTYQSMGRIGEANNGDTYHSMGRAHDGPFRLRDATLQPQGTRRTFHTFGPQHQT
NNNNSHPAWRRARGLDGGWRSVTPTTTDDDDLTTTSGSYTLSPEEAPSDMDEVPFHQAHD
IMV
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgaaaacaacgtacaaaatgatccggcttgtgtctctcgtgactctagcgctgctggta
cagagccagagccaggatttcttcaggctgacctacaacatcacggaggagcaagaacca
ggcatcttcgtaggcaacactgctctggacactgggctcttcaacagcgcgaacagccag
gacttccaggacctcaagttcgagctgttcgccagcggagacgacaacgccaagttcttt
tctatcgacgaacagaacggcgtggtgcggaccaaggctcgtatcgacagggaggctgtg
tgtggcaacgaggtggactgcaccatgatcctcaacatgggcgtgtacaggaagacctcc
caggatggcgagttcgacttctaccggtccatcgaggtggtggtccgggtggaggacagg
aacgacaacgcacctgagttcccccagaaagtggtgaccctcgccttgccggagaacatg
ccggcaccgtacaagctttacaccagcgtggccacggacccggacaaggagggtcccaac
tccaacatcacctacgatttcgaaagcacgtcggacatcttctcgctagaagtggagcgg
aacccggagaacggcttgacggacctgatcgtcaaggtcaaccagatgttggacagagaa
gctgcggattcctactacgtcagaatcgtggcgtccgacggtggctcccccaggcagtcg
gggtccgttctcatcaacatcgccgtcacggaccgcaacgacaacgcccctgtcttcatg
tcctccaactacaccgtcaacgtcaacgagaacgcctccatccgcgagcctattctgatc
gtgtccgctgttgaccaggacattaacgacaacggccaggtcctgtacaagctgggtgcg
cgtgtggacgacgagatcaagcagcactttcagatcggggagactgacggcaaggtctac
ctcacccggcccgtcgacttcgagaccaaggacaagttcgtcttcgtcatcgatgccttg
gacagaggcaacccaccccagtcttcctccgcctacatcatcgtcaacatcatcgacgtc
aacgacaacgccccggagatcttcctcaacctgtcccccgatggcacggacatcacggag
cacgagccagcgggcaagttcctcgggcacttctccgtgtctgaccaggactccggtgtc
catggcgacgtggtgtgcgagatcgacgaccccaacttcaggctggaccccttcgagggt
cagcccaacgtgtacaagatcgtgctggccatgccgctagaccacgaggaccttccccga
cgccaggtcgccatccgctgccgcgacagcgacaagaacccgctgctggccaccaagacg
ttcgaggtcaaggtgttggacatcaacgacaacgctccgcacttccacaccgccaccttc
agaggctctgtcatggagaacgaggcgcccgccaccaacgtcgtgcagcagacactcacc
gacgccagcggcagcagcaacgtgctgaggattgtggccgaggacctggacagcggggac
aacgggagggtgacgtactccatccccgtgcccaccaacttctccatcgacgcgctgacc
gggaccctcagcacgctggtgacgttcgaccgcgaggtgcaggcccagtacaccttcccc
gtcgtggcggaagaccacggggaaagcccgctctccgccaccgccaccgtcatcatcacc
attcaggacaagaacgaccacccgccgaagttcgcgcagcccatctacttcctcgatgtg
caggagaacatggagcccgggtcggtgtgcggaacgatcatggcgctggacgaagactcc
ggctccaacgccagggtggtgtactctatcgtccgtgacgacgacagcagcaggttcttc
tctgttaaccgcgacaccggggaggtgaccacgaaccagctgctggaccgggagacgagg
gactcctactccttcacgctggaggcgcagaacccgtccaacgcggacttcagggacacc
acgcgggtcatggtcagcgtggtggacgacaacgaccaccccccggtcatcagcaacccc
tcccccaccaacaacacaatcaccctccccaacaacaccaccgtggggtccctcatcctc
agagtgcgagccacggacggcgacgatcctaaagacacctcgtttgagtacaccatccct
ggcagcgcgaaaggaagcctgttccaagtcatcaccgtcactggagaactcatcttggcc
agagagattcgcccgcaggacgccaagacccacgaactcctcatcgtcgtcagcgacggg
ggttcgaacccgcggtcagccacggctacacttttggtgaccattccggcggagggcatg
ccagcggcggccacggccaacattctgaacgagcccaacgtcatcatcatcgtcgtcatc
atcgtggtgacgttgctggtggcgatactggtcttcatcgccatttgctgcatctaccgc
agagacaggaagaggacggcgggtcgacagcagcagagacacgtgaaggacaagatgtac
caagctgcccactgggtgagcacccactccctgccccccggtgaccccaacggatccccc
gttcacgagacttcgcgaagttctgacggcatgggggataagaagggtaagaaggaagtc
agcttctctctggacgaagacatggagaaggagggagaccccgacaccagtgggtccctg
gggtccgttttctctgctcccacttctggcgctcctgataacaacaatttgaagccccca
ggagacggacggttcatcacgttcattagcggcaagacctcgcctggctcgctcaccgct
ccctacgagagttctgacggtcacacctaccacaacacacccatagctgaaacggattct
ccgtggttccaggatcacctgcacatgcagctggacagaccggggggcgaggacgcgctg
agtgccagcagtggcgagacagggacggacagtgggagagggggcagtgaggatgaggct
cacagcaaccggggctcttcgctcgacacagactctcgctcgttccacccggcccagtct
cacagcagcggctactcctccttctccagcgccgacaggggacggcggaaacccccttcc
ctctcctccctgcccgaggagcaccaccaccacctcccccaccccctccagcaccacccc
gccaacgaccacgcgctccaccccaacccccagcaccacaactacttcagatcgtcccac
gagcagctgccgactcacgggctgggctaccccgcaggctgttccaggaactattccttc
aaccacgccatgcctggcaccaagagcaacaccatagggggcagcagtggtagtgctgct
ggtgaggctaacaatggggacacttaccagagcatggggcgtattggtgaggctaacaat
ggggacacttaccacagcatgggccgtgctcatgacggtccgttcagactgcgagacgct
accctccagccgcaagggacgaggaggacgttccacacgttcggacctcagcaccagaca
aacaacaacaacagccacccggcctggagacgcgctagggggctggatggggggtggagg
tccgtgacccccaccacgacggacgacgacgacctgacgacgacgtccggtagctacacg
ctcagcccggaggaagcgccgtcggacatggatgaggttcccttccaccaggcacacgac
atcatggtgtga

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