Entry |
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Name |
(RefSeq) protocadherin-1-like isoform X1
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KO |
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Organism |
lsax Littorina saxatilis
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Pathway |
lsax03273 | Virion - Lassa virus and SFTS virus |
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Brite |
KEGG Orthology (KO) [BR:lsax00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138968326
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:lsax01009]
138968326
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:lsax04515]
138968326
Protein phosphatases and associated proteins [BR:lsax01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138968326
Cell adhesion molecules [BR:lsax04515]
Cadherins
Protocadherins
138968326
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
LG6:complement(4494656..4638946)
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AA seq |
1263 aa
MKTTYKMIRLVSLVTLALLVQSQSQDFFRLTYNITEEQEPGIFVGNTALDTGLFNSANSQ
DFQDLKFELFASGDDNAKFFSIDEQNGVVRTKARIDREAVCGNEVDCTMILNMGVYRKTS
QDGEFDFYRSIEVVVRVEDRNDNAPEFPQKVVTLALPENMPAPYKLYTSVATDPDKEGPN
SNITYDFESTSDIFSLEVERNPENGLTDLIVKVNQMLDREAADSYYVRIVASDGGSPRQS
GSVLINIAVTDRNDNAPVFMSSNYTVNVNENASIREPILIVSAVDQDINDNGQVLYKLGA
RVDDEIKQHFQIGETDGKVYLTRPVDFETKDKFVFVIDALDRGNPPQSSSAYIIVNIIDV
NDNAPEIFLNLSPDGTDITEHEPAGKFLGHFSVSDQDSGVHGDVVCEIDDPNFRLDPFEG
QPNVYKIVLAMPLDHEDLPRRQVAIRCRDSDKNPLLATKTFEVKVLDINDNAPHFHTATF
RGSVMENEAPATNVVQQTLTDASGSSNVLRIVAEDLDSGDNGRVTYSIPVPTNFSIDALT
GTLSTLVTFDREVQAQYTFPVVAEDHGESPLSATATVIITIQDKNDHPPKFAQPIYFLDV
QENMEPGSVCGTIMALDEDSGSNARVVYSIVRDDDSSRFFSVNRDTGEVTTNQLLDRETR
DSYSFTLEAQNPSNADFRDTTRVMVSVVDDNDHPPVISNPSPTNNTITLPNNTTVGSLIL
RVRATDGDDPKDTSFEYTIPGSAKGSLFQVITVTGELILAREIRPQDAKTHELLIVVSDG
GSNPRSATATLLVTIPAEGMPAAATANILNEPNVIIIVVIIVVTLLVAILVFIAICCIYR
RDRKRTAGRQQQRHVKDKMYQAAHWVSTHSLPPGDPNGSPVHETSRSSDGMGDKKGKKEV
SFSLDEDMEKEGDPDTSGSLGSVFSAPTSGAPDNNNLKPPGDGRFITFISGKTSPGSLTA
PYESSDGHTYHNTPIAETDSPWFQDHLHMQLDRPGGEDALSASSGETGTDSGRGGSEDEA
HSNRGSSLDTDSRSFHPAQSHSSGYSSFSSADRGRRKPPSLSSLPEEHHHHLPHPLQHHP
ANDHALHPNPQHHNYFRSSHEQLPTHGLGYPAGCSRNYSFNHAMPGTKSNTIGGSSGSAA
GEANNGDTYQSMGRIGEANNGDTYHSMGRAHDGPFRLRDATLQPQGTRRTFHTFGPQHQT
NNNNSHPAWRRARGLDGGWRSVTPTTTDDDDLTTTSGSYTLSPEEAPSDMDEVPFHQAHD
IMV |
NT seq |
3792 nt +upstreamnt +downstreamnt
atgaaaacaacgtacaaaatgatccggcttgtgtctctcgtgactctagcgctgctggta
cagagccagagccaggatttcttcaggctgacctacaacatcacggaggagcaagaacca
ggcatcttcgtaggcaacactgctctggacactgggctcttcaacagcgcgaacagccag
gacttccaggacctcaagttcgagctgttcgccagcggagacgacaacgccaagttcttt
tctatcgacgaacagaacggcgtggtgcggaccaaggctcgtatcgacagggaggctgtg
tgtggcaacgaggtggactgcaccatgatcctcaacatgggcgtgtacaggaagacctcc
caggatggcgagttcgacttctaccggtccatcgaggtggtggtccgggtggaggacagg
aacgacaacgcacctgagttcccccagaaagtggtgaccctcgccttgccggagaacatg
ccggcaccgtacaagctttacaccagcgtggccacggacccggacaaggagggtcccaac
tccaacatcacctacgatttcgaaagcacgtcggacatcttctcgctagaagtggagcgg
aacccggagaacggcttgacggacctgatcgtcaaggtcaaccagatgttggacagagaa
gctgcggattcctactacgtcagaatcgtggcgtccgacggtggctcccccaggcagtcg
gggtccgttctcatcaacatcgccgtcacggaccgcaacgacaacgcccctgtcttcatg
tcctccaactacaccgtcaacgtcaacgagaacgcctccatccgcgagcctattctgatc
gtgtccgctgttgaccaggacattaacgacaacggccaggtcctgtacaagctgggtgcg
cgtgtggacgacgagatcaagcagcactttcagatcggggagactgacggcaaggtctac
ctcacccggcccgtcgacttcgagaccaaggacaagttcgtcttcgtcatcgatgccttg
gacagaggcaacccaccccagtcttcctccgcctacatcatcgtcaacatcatcgacgtc
aacgacaacgccccggagatcttcctcaacctgtcccccgatggcacggacatcacggag
cacgagccagcgggcaagttcctcgggcacttctccgtgtctgaccaggactccggtgtc
catggcgacgtggtgtgcgagatcgacgaccccaacttcaggctggaccccttcgagggt
cagcccaacgtgtacaagatcgtgctggccatgccgctagaccacgaggaccttccccga
cgccaggtcgccatccgctgccgcgacagcgacaagaacccgctgctggccaccaagacg
ttcgaggtcaaggtgttggacatcaacgacaacgctccgcacttccacaccgccaccttc
agaggctctgtcatggagaacgaggcgcccgccaccaacgtcgtgcagcagacactcacc
gacgccagcggcagcagcaacgtgctgaggattgtggccgaggacctggacagcggggac
aacgggagggtgacgtactccatccccgtgcccaccaacttctccatcgacgcgctgacc
gggaccctcagcacgctggtgacgttcgaccgcgaggtgcaggcccagtacaccttcccc
gtcgtggcggaagaccacggggaaagcccgctctccgccaccgccaccgtcatcatcacc
attcaggacaagaacgaccacccgccgaagttcgcgcagcccatctacttcctcgatgtg
caggagaacatggagcccgggtcggtgtgcggaacgatcatggcgctggacgaagactcc
ggctccaacgccagggtggtgtactctatcgtccgtgacgacgacagcagcaggttcttc
tctgttaaccgcgacaccggggaggtgaccacgaaccagctgctggaccgggagacgagg
gactcctactccttcacgctggaggcgcagaacccgtccaacgcggacttcagggacacc
acgcgggtcatggtcagcgtggtggacgacaacgaccaccccccggtcatcagcaacccc
tcccccaccaacaacacaatcaccctccccaacaacaccaccgtggggtccctcatcctc
agagtgcgagccacggacggcgacgatcctaaagacacctcgtttgagtacaccatccct
ggcagcgcgaaaggaagcctgttccaagtcatcaccgtcactggagaactcatcttggcc
agagagattcgcccgcaggacgccaagacccacgaactcctcatcgtcgtcagcgacggg
ggttcgaacccgcggtcagccacggctacacttttggtgaccattccggcggagggcatg
ccagcggcggccacggccaacattctgaacgagcccaacgtcatcatcatcgtcgtcatc
atcgtggtgacgttgctggtggcgatactggtcttcatcgccatttgctgcatctaccgc
agagacaggaagaggacggcgggtcgacagcagcagagacacgtgaaggacaagatgtac
caagctgcccactgggtgagcacccactccctgccccccggtgaccccaacggatccccc
gttcacgagacttcgcgaagttctgacggcatgggggataagaagggtaagaaggaagtc
agcttctctctggacgaagacatggagaaggagggagaccccgacaccagtgggtccctg
gggtccgttttctctgctcccacttctggcgctcctgataacaacaatttgaagccccca
ggagacggacggttcatcacgttcattagcggcaagacctcgcctggctcgctcaccgct
ccctacgagagttctgacggtcacacctaccacaacacacccatagctgaaacggattct
ccgtggttccaggatcacctgcacatgcagctggacagaccggggggcgaggacgcgctg
agtgccagcagtggcgagacagggacggacagtgggagagggggcagtgaggatgaggct
cacagcaaccggggctcttcgctcgacacagactctcgctcgttccacccggcccagtct
cacagcagcggctactcctccttctccagcgccgacaggggacggcggaaacccccttcc
ctctcctccctgcccgaggagcaccaccaccacctcccccaccccctccagcaccacccc
gccaacgaccacgcgctccaccccaacccccagcaccacaactacttcagatcgtcccac
gagcagctgccgactcacgggctgggctaccccgcaggctgttccaggaactattccttc
aaccacgccatgcctggcaccaagagcaacaccatagggggcagcagtggtagtgctgct
ggtgaggctaacaatggggacacttaccagagcatggggcgtattggtgaggctaacaat
ggggacacttaccacagcatgggccgtgctcatgacggtccgttcagactgcgagacgct
accctccagccgcaagggacgaggaggacgttccacacgttcggacctcagcaccagaca
aacaacaacaacagccacccggcctggagacgcgctagggggctggatggggggtggagg
tccgtgacccccaccacgacggacgacgacgacctgacgacgacgtccggtagctacacg
ctcagcccggaggaagcgccgtcggacatggatgaggttcccttccaccaggcacacgac
atcatggtgtga |