Littorina saxatilis: 138968632
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Entry
138968632 CDS
T10665
Name
(RefSeq) TBC1 domain family member 1-like
KO
K17902
TBC1 domain family member 4
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138968632
Membrane trafficking [BR:
lsax04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138968632
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
138968632
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
138968632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
Motif
Other DBs
NCBI-GeneID:
138968632
NCBI-ProteinID:
XP_070197331
LinkDB
All DBs
Position
LG6:17184376..17305125
Genome browser
AA seq
1325 aa
AA seq
DB search
MEDSAASKACGETEAANDPPKTGVSAGRQVTENSRCVGSNLSKGASTSKDSVREGAECGA
SFTVWYLGSAIMHRLYTQSLQPWVMAEVKRKRDGIREVTIEVTTEGILRVKGRDPSGKET
GEIVLEHRLQVLSRFARLHQDQRCFAYLTRTQLGTDFVCHVYLATTDNTITELFSCIREA
TRDLHLSGAASNMGEGTEVSDNVKATYEVKYVGRATVHCRKLASDVMDALAERLLAWDDE
KMTKKTEDKDRRHRHASGASIKSLPASLDEAVSITENNLGDQLERLRRGANAAASHAGNF
NDESGDSSADDLASGGEMSSSENILEEPPHHQQQQPQQHLQQPQPQAQLGHHHHSFHSVT
IEKHSLGKRDSADSVGEIGSAEDVFHDSSGNVKASRVMLLQISDRDISLISLDNKLTIFE
RSFKDIASVSQGNHKKDIFGLIVREPDGSGTVLMAYVLKCHSEAVVNEIMNTLQTAFMSA
FQKTSSQQQVCNMCPLHQLHRVHQEITKLSPQAAHELLVKRIQHLPDRDISEVSHRVKME
GPTTYEESVEVMMIALRQLCERRQREHTHVSEGARPSKQDMNLLEEHHKFVLFEGLRNKA
KKSLANSFENLTRARKREDARDHFRQRSWTTESETVAWTNRSDSSTPDGSPVTSPTSKHF
SHDFPSPPASPEPRKRSSTLGAIPDAGERERAAAKQRLRDVNHNTPKTNSPMKTMYLLSS
SPHQHESSSSSPMTSPQDENGQRSTPQVQGSWRKAIFERVCTPTSRDASMNAFEAEHDGH
EGRKGRKRTSGEIRALWRKAMLETLLLIRMEKENSDIKARQEEEYSSERKLDYEELTPCL
RDVTRVWDDLLNTTTGSGTNVSYSTLLECVKQGVPRNMRGPIWNFLAVKQCRHSNIDITM
PGFSELPYDDLLKQLTTHQHAILIDLGRTFPGHPYFAKALGPGQLELFNLLKAYSLLDKE
VGYCQGISFIAGVLLMHMEETAAFELTRHLMIGLGLRKQYCPNMMALQVKLYQLMRLIHD
QYRDLYNHFEAHEIAPALYATPWFLTLFASQFPLGFVARVFDMIFIQGPDVIFKVGLMLL
GSHKELILQCDSFESVVDFLKTTLPEMAHVQMERIINQAFELDISKQLQAYEVEYHVFSE
EMIYSPRRNHHPNAPGSGSSANHPAVLALQQTVRRLRQQNLELVEKLQRTNSQLQGLQMG
THEHRVNEDKQKARIQALELERSALLTTVASLKTLIPLSEQDQIPRMLQMQSLSASTSPA
THRRMPGGPVREWSKSENNSVSDLRLSSHQGAPSVHSAGDAGRDANALYSDTTDTLCGSS
SSEKD
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcgcagcgagcaaagcgtgtggtgaaaccgaagctgcaaacgatcctccg
aaaacaggtgtgtctgctgggagacaggtgacagagaacagtcgatgcgttggatctaat
ctatcaaaaggagcttcaacctctaaggattctgtccgggagggagcagaatgtggcgcc
agtttcacggtgtggtacctggggtctgcaatcatgcaccgcctctacacccagagtctg
cagccctgggtcatggctgaggtcaaacggaaacgagatggaatcagagaagtgacaata
gaggttactacagaaggcatccttcgagtgaaaggacgcgatccgtcaggcaaagaaact
ggagaaattgttcttgagcatcgcttgcaagtgctgtcccggtttgctcgtctgcatcaa
gatcaacgatgctttgcctacctcactcgcacgcagcttgggactgactttgtttgtcat
gtctaccttgccaccactgacaatacgataacagaattgttcagctgcatccgcgaagct
acacgtgaccttcacctttctggagctgccagcaacatgggggaaggaacagaagtgtct
gacaatgtcaaggccacgtatgaggtcaaatatgtcggccgggcaacggttcactgtcgc
aagctggcatctgacgtcatggatgctctggctgagcgtcttctggcgtgggacgacgaa
aagatgacgaagaaaacggaggataaagataggaggcacagacatgctagtggagctagc
attaagagtctgccagcctcgctagacgaagcagtcagcatcaccgagaacaacctcggg
gaccaactggagaggttgaggagaggtgctaacgccgcagcgtcccacgctggaaacttc
aacgacgagagcggggacagcagcgctgacgatttggccagcgggggtgagatgagctcc
tcggagaacatcctggaagagcctccccaccaccaacagcaacagccgcaacagcatctt
cagcagcctcagcctcaggctcagctggggcatcatcatcacagctttcacagtgttact
attgagaaacacagtttgggcaaacgcgacagcgcagacagcgttggagagattggaagc
gcagaggacgtatttcacgattcttcggggaacgtgaaggccagtcgggtcatgcttctg
cagatcagcgaccgtgacatctctctcatctccctcgacaacaaactcaccatctttgaa
cgaagcttcaaggacatcgcatcagtgtcgcagggcaatcacaagaaggatatcttcggt
ctgattgtcagagagccggacggcagcgggactgtgctcatggcctacgttctcaagtgt
cattctgaggctgtggtgaacgagataatgaacacactgcagacggcgttcatgtcagcg
ttccagaagacgtcgtcgcagcaacaggtgtgcaacatgtgcccgctacatcagctgcac
cgcgtgcaccaggaaatcacaaagctgagtccccaggccgcccacgagctgttggtgaaa
cgcatccagcatctaccggaccgcgacatcagcgaagtctcacacagagtcaagatggag
ggtccgacaacatacgaagagtcggtggaggtgatgatgatcgctctcagacagctgtgt
gaacgcagacagcgagaacacacgcacgtctccgagggcgctagacccagcaaacaggat
atgaatcttctggaagagcaccacaagtttgtgttgtttgaggggctgaggaacaaggcc
aagaaaagtctcgccaactcctttgaaaatctgacgagggcccgtaagagggaggatgcc
agggaccatttccgccagaggtcctggaccactgagagtgaaaccgtcgcatggaccaac
cgctcggattcgtcgacccctgacggttccccggtgacctctccgacgtccaaacacttc
agccatgacttccccagtcccccagcctcgccagaaccccgcaaacgatcctccaccctg
ggtgccattccggacgctggggagagagagcgtgcggccgccaagcagaggcttcgcgac
gtcaaccacaacacgcccaaaaccaacagccccatgaagaccatgtacctgctgtcgtcc
agtccacaccagcacgagtccagctcctcttcccccatgacctccccccaggacgagaat
ggccagcggtcaacgccccaggtacagggctcctggcgcaaggccatcttcgaacgagtg
tgtaccccgaccagtcgcgacgcatccatgaacgctttcgaggcggaacatgatgggcat
gagggcaggaaaggcaggaaacggacgtctggagaaatccgtgcgctgtggagaaaagcc
atgctggaaacattgctgcttattcgcatggagaaggagaattcagacatcaaagcgcga
caggaggaggagtatagctcggagcgtaagctggactacgaggagctgacgccatgtctg
cgtgatgtgaccagggtgtgggacgacctcctcaacacaaccactggctccggcaccaac
gtctcctacagcactctgctggagtgcgtcaagcagggtgtgccaagaaatatgcgagga
cccatctggaactttttggcggtgaaacagtgtcgccatagcaacatagatatcacaatg
cccggcttctcagagctgccctacgatgatctgctgaaacagctcaccactcatcagcac
gccatcctcattgacctgggtcgcacgttcccaggacacccgtactttgccaaggcgctg
ggaccggggcagctggagttgttcaacttgctaaaggcgtacagcttgctggacaaggag
gtcggctactgtcagggaatcagcttcatcgccggcgttctgctcatgcatatggaggag
acagcagccttcgagctgactcggcatttgatgatcggtttggggttgaggaaacagtac
tgtcccaacatgatggctttgcaggtgaagctgtaccagctgatgcggctcatccatgac
cagtaccgtgacctttacaaccacttcgaggcgcacgagatcgccccagccctgtacgcc
accccgtggttcctgacgctctttgcttcccagttccccctcggctttgtcgccagggtc
tttgacatgatcttcatccagggcccagacgtgatcttcaaggtcggcctgatgctgctg
ggcagccacaaggagctgatcctgcagtgcgactccttcgagagcgtggtggacttcctc
aagaccaccctgcccgagatggcccacgtccagatggagaggatcatcaaccaggcgttt
gaactggacatcagcaagcagctgcaggcctacgaggtggagtaccacgtcttcagcgag
gagatgatctactcccccaggcgcaaccaccaccccaacgcgcccggatccggatccagc
gccaaccacccagccgtgctggccttgcagcagacggtgagacgactacgccaacagaac
ctggagctggtggagaaactccaacgcaccaacagtcaacttcaaggcctgcagatgggc
acccacgaacaccgcgttaacgaggacaagcagaaggctcgcatccaggcgctggagctc
gaacgctcagccctgctcacgacagtcgccagcctgaagacgctgattccgctgagcgag
caggaccagattccgcggatgcttcagatgcagagcctctcggcgtctacgtcccccgcg
acacatcgccgaatgcccggaggtcctgtgagggagtggtctaagagtgagaataacagt
gtgagtgacttgaggctgtcaagccaccagggggcgccctctgtgcacagtgccggtgac
gctggcagagacgccaatgctctttacagtgacaccaccgacacgctttgtggtagcagc
tcttcggagaaagactga
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