Littorina saxatilis: 138969031
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Entry
138969031 CDS
T10665
Name
(RefSeq) protocadherin beta-12-like
KO
K16498
protocadherin delta 1
Organism
lsax Littorina saxatilis
Pathway
lsax03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138969031
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsax01009
]
138969031
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsax04515
]
138969031
Protein phosphatases and associated proteins [BR:
lsax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138969031
Cell adhesion molecules [BR:
lsax04515
]
Cadherins
Protocadherins
138969031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF3313
ECSCR
Orf78
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
138969031
NCBI-ProteinID:
XP_070197822
LinkDB
All DBs
Position
LG6:complement(32371233..32430550)
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AA seq
1162 aa
AA seq
DB search
MNALKFSSLWLLLLALTEVVKGQVSNVVLGPFVEQQRAGVMVGNVASASNIASEVPPGEF
QTLRYEFLDPSNLQTASLFTLNGQTGGVFTSAMIDREAVCEYMEECLLRFKVSVNSETTP
FLRIVNVAVNITDENDNVPTFPREEITINIPEGNSVGLTYPLPNAVDKDTKKNAVVEYNL
LSNDDTFVLNVERNLDDTFKVSLTVNKMLDREQRDRYLVRVTARDGGMQPLTGTLTVNIN
ITDVNDNDPKFDQSFYPQTVVENAPVGTVIGRVHATDLDAGMNARITYSFSASASRTKVQ
KLFAIDANTGELQIVAPLQFDSGKSFDVIIEAKDNGTPRLETQAQVQFTILDTGNNPPRA
EFVAKNPLYDRTVLILENVKVPTLVGTMQVEDNDPGPSGTVNCQSSHMAFRVKKLQDRQG
FLVLLQTQLDREVEDKVNVTISCADAGAPPMTAVTTFSVIVGDVNDNAPVFTMHAYMANL
SENADKDVEIIRVAAHDFDKGINSQFYYYLHPRENEMFKLNSKSGVLTSNMVFDREVNSE
VSVIIKAIDEGDQAMTGTATVVVQITDVNDNAPYLETSEFHIMEGNTPERYVGRLLAHDR
DVGINAEVMYYMKAVSPLPPFTVYPDGQIRTASDVDINREIQDTYILEIHMNDKGTPSMS
SSGTVTVHVMDVNDNSPEVMYPNSKNNTVTIMWNHTPNTPFAHIDAWDPDDGDNARLSYF
ITGGNKHFLFEVSMDGGSVFLKRYIGDTDMTFHRLKIAVMDNGKPHQNEVQTLLNIRIDL
TNATFAHQEGPAEVERNILIVAIVIGATIVISIVIVVVIFMVRSSSRRPRRTKDPSEWQR
DKTGIQEECGKTEMEKVAWKVAQAEYKAAPPEPHDMEEDLCDSSEHVTMGKVASLPWSND
KRGGGGGLVDSHLTHSALDQYRKQDFYTFCKVRSPLDDVHSVTSGETTTSDSGRGGSEDD
AILPPIAEVPPECGSNQCLSLDRHSDRSTSPLSPVKSGGGFGSPETKILPLSSFREPENR
RLYTNMKMAMNDPSAMYPAYTSDKVHPSSLKRNHYMNQPSSVNLPTTSRGGSGGGIMTGS
NKSLPHNLRGSGGAGRQVTFAQSRSLPRFEAGKRSPCPPAYEHLLPDGAGNYTSFSRGID
DDDTTTSGSYTLDNVDMDDSLS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttgaaattctcatcgctctggctccttctcctggctctgaccgaggtggtc
aagggccaagtgagcaacgtggtgctaggacccttcgtggaacaacagagggcgggagtg
atggtgggcaacgtggccagtgccagcaacatcgccagtgaggtgccccccggcgagttc
cagactcttcgctacgagttcctggacccgtccaacctgcagacagcctccctcttcacg
ctcaacgggcagacaggaggggtgttcaccagcgccatgatagacagggaggctgtgtgc
gagtacatggaggagtgcctgctcaggttcaaggtgtcggtgaactcggaaaccacgcca
ttcctccgcatcgtcaatgtggccgtcaacatcacagacgagaacgacaacgtgccgacc
ttcccgcgcgaggaaatcactatcaacatccccgagggcaacagcgtcgggttgacctat
ccgctgcccaacgcagtggataaagacaccaagaagaacgcggtggtggagtacaacctg
ctctctaacgacgacacttttgtgctgaacgtggagaggaaccttgacgacacgttcaag
gtgtctctcaccgtcaacaagatgctagaccgggagcagcgtgaccgttacttagtgcgc
gtgactgcgcgtgacgggggaatgcagcctttgacgggcacgctcaccgtcaacatcaac
atcacggacgtcaacgacaacgacccgaagttcgatcaaagtttctacccacagaccgtg
gtggagaacgccccggtgggcacggtgataggccgggtccacgccacagacctagacgct
ggcatgaacgcgaggatcacctactccttcagcgcctcggcttcacgcaccaaagttcag
aagctcttcgctatagacgccaacacgggggagctccagatcgttgcgccgctgcagttt
gactctggcaaatctttcgacgtgatcatcgaggccaaggacaacgggacgcccaggctg
gagacccaggcacaggtgcagttcaccattttggacaccggcaacaatccaccgcgcgca
gagttcgtggccaagaacccgctgtacgaccgcacggtgctgatcttggagaacgttaag
gtccccaccttggtaggaaccatgcaggtggaagacaatgaccccggccccagcggcacc
gtcaactgccagtcgtcgcacatggccttcagggttaagaagctgcaggatagacaggga
ttcctggttctactgcagacgcagcttgaccgcgaggtggaggacaaggtcaacgtcacc
atttcctgcgcggacgccggggctcctcccatgacggcggtcaccaccttcagtgtcatt
gttggcgacgtcaacgacaacgcgccagtgttcacgatgcacgcctacatggccaacctc
tctgagaacgcagacaaggacgttgagatcatcagagttgccgcgcatgacttcgacaag
ggcatcaacagccagttctactactacctccacccacgcgagaacgagatgttcaagctg
aactccaagtcgggcgtgctgacctcaaacatggtgttcgacagggaggtcaactcagag
gtcagcgtcatcatcaaggccatcgacgagggcgaccaggctatgacggggacggcgaca
gtggtggtgcaaatcaccgacgtcaacgacaacgctccgtatctagaaacctcggagttt
cacatcatggaaggcaacaccccggagagatatgtaggtaggctgctggctcatgaccgg
gacgtggggatcaacgctgaggtgatgtactacatgaaagccgtgagccctctgcccccg
ttcactgtgtaccctgacggccagatccgcacggccagcgacgtagacatcaatcgggag
atccaggacacgtacattctagagatccacatgaacgataaagggacgccgtccatgtcc
tcctcgggcactgtcaccgtgcacgtgatggacgtgaacgacaacagccccgaggtgatg
taccccaactccaagaacaacacggtcaccatcatgtggaaccacacgcccaacaccccc
ttcgcgcacatcgacgcctgggacccagacgacggcgacaacgccaggctgtcctacttt
atcacgggcggcaacaagcacttcctgttcgaggtgtctatggacggcgggtcggtcttc
ctcaagcgctacatcggggacacggacatgaccttccaccgcctcaaaattgccgtgatg
gacaatggtaagccgcaccagaatgaggttcagaccctgctcaacatccgcatcgacctc
actaacgccaccttcgcgcaccaagaaggccccgccgaggtggagcgaaatattctcatc
gtcgccatcgtcatcggcgccaccatcgtcatctccatcgtcatcgtcgtcgtcatcttc
atggtgaggtcgtccagccgacgcccgcgcaggactaaggaccccagcgaatggcagagg
gacaagactggcattcaagaggagtgcggtaagacggagatggaaaaggtggcctggaaa
gtagcccaagccgagtacaaggctgctcctcccgagcctcacgacatggaggaggatctg
tgcgattcctccgaacacgtaacgatgggcaaagtggctagcttaccgtggagtaacgac
aagcggggagggggaggcgggctggtagactcccacctaacgcattctgccctggatcaa
tataggaagcaggacttttacacattttgcaaggttcggagcccgctagatgacgtccac
agcgtcacttccggggagacaactacgagtgatagtggacgcggcggaagtgaagacgac
gccattcttccgcccatagccgaagtaccccccgagtgtggaagtaaccaatgcctgtcg
ttagaccggcactcggaccgctccacctctccgctgtcccctgtcaagtcggggggcggc
ttcgggtccccggagaccaagatcctgccgctcagcagcttccgtgagcccgagaaccgc
cgcctgtacaccaacatgaagatggccatgaacgacccctcagccatgtaccccgcctac
accagcgacaaggtgcacccttcctccctcaagcgcaaccactacatgaaccaaccctcc
tccgtcaacctccccaccaccagcagaggcggaagtggcggcggcatcatgacgggctcc
aacaagagtctgccccacaacctccgcggctcgggcggagcggggcgacaggtcaccttc
gctcagagtaggtcactgccgcggtttgaggcgggcaagaggtcgccttgcccgccggct
tacgaacacttgttgcccgacggggcaggtaactacaccagcttctcgaggggtattgac
gacgacgacaccacgacttcgggaagctacactctggacaatgttgacatggacgacagc
ctctcttga
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integrated database retrieval system
