Littorina saxatilis: 138969216
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Entry
138969216 CDS
T10665
Name
(RefSeq) DNA-binding protein SMUBP-2-like isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsax03009
]
138969216
03012 Translation factors [BR:
lsax03012
]
138969216
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138969216
5.6.2.5 RNA 5'-3' helicase
138969216
Ribosome biogenesis [BR:
lsax03009
]
Eukaryotic type
Other ribosome biogenesis factors
138969216
Translation factors [BR:
lsax03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138969216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
SMUBP-2_HCS1_1B
AAA_30
AAA_19
R3H
zf-AN1
ResIII
Viral_helicase1
DEAD
nSTAND3
AAA_16
UvrD-helicase
AAA_22
SLFN-g3_helicase
Flavi_DEAD
IstB_IS21
AAA
AAA_25
SRP54
PhoH
T2SSE
Zot
UvrD_C_2
NTPase_1
CbiA
ABC_tran
MeaB
APS_kinase
AAA_33
ATPase
PspAA
Glyco_transf_21
AAA_28
DAP3
Motif
Other DBs
NCBI-GeneID:
138969216
NCBI-ProteinID:
XP_070198060
LinkDB
All DBs
Position
LG6:complement(40958700..40979405)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSVDEFVTRTRKLLEKERDAEIEETRVLTEQLPAKELQRRGVCLIKLRLAERSTGLYGRT
VAAFQPYWPGNDLPSHNFTPGDIVGVAQEGAAQTDSQVSGVVSRILPNSLQVAFEESDDV
FSLDDDKQYRLTKLANDVTYRRLKRALSDLQGYSAGPCQRLINVLFGLTPLTPPTLQQEY
NWMNTGLDDSQKEAVKFALAQPEVAVIHGPPGTGKTTTVVELILQAVRKGVKVLALAPSN
VAVDNLVERLGARHKRIVRIGHPARLLPHIAPYALDAMVAASDQTSLAADARRDLNNLLG
QLKGKRGHSRAGVREEMKQLRREVRKREETATRDILKRADVVLVTLTSASPESPLKLLDE
NHFDLIVIDECSQALEAACWMGLLHGRRCVLAGDPHQLPPTIMSKQAAGEGLGVTLMERV
MKTYGDSVVRMLTTQYRMHRHIMLWSSQKLYGNKLQAHPSVAEHLLKDLPSVEEGETTSI
PLLLIDTAGCNLPELDLPQEVSKGNEGEADIVAAHVEQLVQAGVAPQDIAVIAPYNLQVE
LLRQRLSAKYPSLEIKSVDGFQGREKEAVVISFVRSNNKKEVGFLAEKRRINVAVTRARR
HLAVICDSDTVSSDPFLRSLLDYMSDAGQVWSAHQFVQDGLITESSGRPERLENLLSDTA
SGEQRKKEGGGRKGIGKKAKGEQQLGQSKPQRQTPQAGAESRKPEKQLMSTEDKQPIYEK
MLGDFDADESQTFIAFPSTLTSHDRMVIHEVSEKLGLLHVSRGEGKERHLVVSKPGTRPS
TVPSGEAGDAASCPGDDVENDDPTALSNAEPSAEETETFPSEAAQEEKPKVKAGSSCRLC
GRDVIPANLQLHEAHCGRREHQPAAPASASGAAGGPKKEKKEKKKKPPSQVHQAAQVLGK
VADDDFDALIATVKAMDSKCSYKKCKTLTNTLGRNCVHCMRRFCLQHLMPEIHGCGDAAK
IHARQTISRERVLHPGSGVPNKKPAPDKRAQMERKLNKKLDEMNDKRTRKDPKKDGAGT
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagatgaattcgtcacacgcacccgcaaacttcttgaaaaagaacgtgatgcg
gaaatagaggaaaccagagtactgacagagcagcttccagccaaggagctccagcgtcgt
ggtgtgtgtttgatcaagttacggttggctgaacgcagcacaggactctatggccgtaca
gttgcagcctttcagccatactggcctggcaatgacttgccctctcacaactttacacca
ggtgacattgtgggtgtggctcaggaaggggctgcacagacagacagccaggtgtcaggt
gtggtgtcacgcattctacctaactcactccaggtggcgtttgaagagtcagatgatgtc
ttttccttggatgatgataagcaataccgtctgaccaaacttgcaaatgacgtcacctac
agacgactgaagagagctctgagtgacctgcaaggctactcagcggggccgtgtcaaaga
ctgatcaacgttctgtttggcctgacgcctctcacaccgcctacactgcagcaagagtac
aactggatgaacacagggctggatgactcgcagaaagaagcggtcaagtttgccttggct
cagccagaggtggccgtcattcatggacccccgggcacgggcaaaaccaccactgtagtg
gagctgattctgcaggcagtacgcaaaggagttaaggtgcttgcactggcaccatccaac
gtagctgtggacaaccttgtggagaggctgggagcgcgacacaagcgcattgtgcgtatt
ggtcaccccgctcgtctgctaccccacatcgcaccctacgccctggatgccatggttgcc
gctagcgaccagacctccctggctgccgatgccaggcgtgacctgaataacctgctggga
cagctgaagggcaaacgtggtcacagtcgcgctggagtacgtgaagaaatgaaacaactg
aggcgtgaagtgcggaagcgagaggaaacagccacccgcgacattttgaaacgtgcggat
gtggtgcttgtgaccctgacctctgcctccccggaatccccgctgaagttgctggatgaa
aatcactttgacctaattgttattgacgagtgttcacaggcgctggaggctgcatgctgg
atgggactgctgcacggtcgtcgttgtgtccttgctggagatccacaccagttacctccc
accatcatgtcaaaacaggcagcaggtgagggtctgggcgtgacactgatggagagggtg
atgaagacatacggtgactcagtggtacgcatgctgaccacgcagtaccgcatgcaccgt
cacatcatgctgtggtcctcacagaaactctacggcaacaaactgcaggcccacccctct
gtggccgaacatttgttgaaagatctgcccagtgtggaggaaggggagacgaccagcata
ccgcttttgctgatagacacagcaggctgtaatctgcctgaactcgacttgccacaggag
gtgtcgaagggtaacgaaggagaggcagacatcgtagcagcgcacgtagaacagctggtg
caggctggggtagcgccacaggatattgctgttatcgcaccctacaacttacaagtggag
ttgctacggcaacgcctgtcagccaaataccccagcctggaaatcaagtctgtggatggg
ttccagggacgagagaaggaggctgtcgtcatttcctttgtcaggagtaacaacaaaaag
gaggtgggattcttggcagagaagcggcgaatcaacgtggctgtgacgagagctcggcgc
cacctggcagtgatctgtgacagcgacactgtgagtagcgaccccttcctgcggtccctg
ctggactacatgagtgacgcggggcaggtgtggtcggcacaccagtttgttcaggatggc
ctgatcacagagagcagtggaaggccagagcgactggaaaacctgctgtctgatacagcg
tcaggagagcagcgcaagaaggaggggggtgggcggaaagggatcgggaagaaagcgaaa
ggagagcaacagttggggcaaagcaaaccacagcgacagacaccacaggctggggcagag
tcacgcaaaccggagaaacagttgatgtcaacagaagacaagcagccaatctatgagaaa
atgctgggagactttgatgccgatgaaagccaaaccttcattgcttttccttccacgctt
acgtctcacgatcgtatggtgattcatgaggtttcagagaaacttggcttgctgcatgtg
agtcggggagaggggaaagagcgccacctggtggtgtcgaagcctggcactagaccatca
acggtgccgtcaggggaggccggtgatgctgccagctgtcctggagatgatgttgagaat
gatgaccccacagcactgtccaatgctgaaccttctgcagaagaaacagaaacctttcca
tcagaagcagcacaagaggaaaagccaaaagttaaagcaggcagcagttgtcgactgtgt
ggtcgtgatgttattccagccaatcttcagctccacgaggctcactgcggcagacgtgaa
caccaacccgcggccccggcgtccgcttctggcgctgctggggggcccaagaaggagaaa
aaggaaaagaagaaaaaacctccatcacaggtgcaccaagcagcacaggtgttgggcaag
gtggctgacgatgactttgacgctctcatcgccacggtaaaggccatggacagcaagtgc
agctacaagaagtgcaagacgctcaccaacacactgggcagaaactgcgtgcactgtatg
cgccgcttctgcttgcaacacctcatgcccgaaatccacggctgcggggacgcggcaaag
attcacgctcgccagaccatatctcgggagagggtgcttcacccaggtagcggggtgccc
aacaagaaacctgcgcctgataaacgggctcagatggagaggaagctgaacaaaaagctg
gacgagatgaacgacaagaggaccaggaaagaccctaaaaaagacggggctggtacctga
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