Littorina saxatilis: 138969438
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Entry
138969438 CDS
T10665
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138969438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138969438
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138969438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
138969438
NCBI-ProteinID:
XP_070198330
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All DBs
Position
LG6:49353199..49371062
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AA seq
559 aa
AA seq
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MAFNFGGSTTSTPSLFGGTATSTASTGFGGFGGLGTGTTGGGFGFGGQTATTQGTTGFSF
GQPAASTAGTGLSFGLPGATTTAPTGFGFGAPAASTGSFGFGTGTTSSAPSFGATSGFGG
LGSTSTGFGGFGTSAGFGGTGSTFGAAKPTSFGFGQPQAATQQPQQQQQQQQQNALANLA
MAVSMPQIFGDERDAIIASWNQLQACWGTGKGFSQSGVVDFKPDNPFCRFKAVGYTAIPT
GRNEDGLVALVLKKKQEEVTAAQTQVVDTITKILGKPNLSVCVEGVRPVPEDRTEIVIYV
IERPPQGPAKRIAAKELCAFLQQQMQWHQLSVQLAAESMAPRMGWSAEQIKQYLDTPPAG
IDPLLWRQAKLDNPDSGKLVPVAMVGFRELQRRLKHQEEETRLHQQRLDVIAGDLGQLQT
QHSQTLAKLDDYKRKHLELGHRLLKVVVKQEICRKLGYAVQVEEEMLKVQLEHLQVELNH
PTQFKGRLNELMSQIRMQSQAGFGRDEPTYQMDTNMQAEIKLILKQQQEGLQHLIDVIKD
DSKDLNRMEQALDTSTITR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaatttcgggggatcgactacctcaacaccttctttattcggtggtactgcc
acatccaccgcatcaaccggttttggtggctttgggggtcttggcacaggtacaaccggt
ggtggctttggctttggtggtcagacagcgacgacccagggtacgacaggattttcgttc
ggccaaccggccgcatccaccgctggcacaggactgtcgttcggcctaccaggcgccacc
actacagcccccacaggcttcggtttcggcgcaccggccgcgagcactgggagttttggg
tttgggacgggcacaacatcgtcagcgccttcttttggtgccacgagtggattcggtggt
ttgggatcaacgtcaacagggtttggtggctttggtacctcagcaggatttggtggcaca
ggcagtacatttggcgctgcaaaacccacatcctttggtttcggccagccccaggcagca
acacaacagccccagcaacaacaacaacaacagcaacagaatgcgctggctaacctggcg
atggccgtgtccatgccgcagatcttcggagatgagcgcgacgccatcattgccagctgg
aaccagctgcaggcttgctggggaacaggcaagggattcagtcagagcggggtggttgac
ttcaaaccagacaatcctttctgtcgtttcaaggctgtaggctacacagccattcccact
ggacgtaatgaggatggcctggtggcgctggtgctaaaaaagaagcaagaggaggtaact
gcagcccagacgcaggtggtggacaccatcaccaagatcctgggaaaacccaacctcagt
gtgtgcgtggagggtgtccgacctgtgcccgaagacaggacggaaattgtgatctacgtg
atagagcgaccgcctcagggtccggcaaaacgcatcgcggccaaagaactgtgtgcgttt
ctacagcaacagatgcaatggcaccagctgagtgtccaactggcggcagagagcatggca
cccaggatggggtggtcagccgaacagatcaaacagtacctggacacgccccccgcagga
atcgatccgttgctgtggcgacaagcgaagctggacaaccctgactcagggaagcttgtt
cctgtggcgatggttggtttccgagagttacagcggcggctcaaacaccaggaggaggag
acaagacttcatcaacagaggctggatgtgattgcgggagacctgggtcagttacagact
caacacagccagacactggccaaactggacgactacaagaggaaacacctggaactcggt
catcgcctactgaaggtggtcgtaaagcaggagatctgcaggaagctgggctatgcagta
caggtggaggaggagatgctgaaggtgcagctagaacatctgcaggtggaactcaaccac
cccacacagttcaagggtcggctgaatgagctgatgtcacagatacgcatgcagagccag
gccgggtttggccgagacgagccaacctaccagatggacaccaatatgcaggcagagatc
aaactgattctaaaacagcagcaagagggccttcagcacctgattgatgtcatcaaggac
gactccaaggatctgaatcgcatggaacaggctctggacacttccaccatcacacgttaa
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