Littorina saxatilis: 138969559
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Entry
138969559 CDS
T10665
Name
(RefSeq) polyubiquitin-C-like
KO
K08770
ubiquitin C
Organism
lsax Littorina saxatilis
Pathway
lsax04120
Ubiquitin mediated proteolysis
lsax04137
Mitophagy - animal
lsax04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138969559
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138969559
04137 Mitophagy - animal
138969559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsax04121
]
138969559
Ubiquitin system [BR:
lsax04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
138969559
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
138969559
NCBI-ProteinID:
XP_070198492
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Position
LG6:complement(56052328..56059342)
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AA seq
837 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgctcaccggcaagactatcacacttgaggtcgagccctcg
gacaccatcgacaatgtcaaggccaagatccaagacaaggagggcatccccccggaccag
cagcgtctgatctttgctggcaagcagctggaagacggacgtacactgtcggactacaac
atccaaaaagagtcgacccttcatctggtactgcgtctgcgtggaggtatgcagatcttt
gtcaagaccctcactggcaagaccatcactcttgaagttgaaccctcagataccatcgac
aatgtcaaggccaagatccaggacaaggaaggcatccccccagaccagcagcgtttgatc
tttgctggcaagcagctggaagatggtcgcacattgtccgactacaacatccagaaagag
tccacccttcatctggtactgcgtctgcgtggaggtatgcagatcttcgtcaagaccctg
actggcaagacaatcactcttgaggttgagccttcagataccatcgagaacgtcaaggcc
aagatccaggacaaagagggcatccccccagaccagcaacgtctgatctttgctggcaag
cagctggaagacggacgtacactgtcagattacaacatccagaaagagtccaccctccat
ctggttctgcgtctgcgtggaggtatgcagatctttgtcaagaccctgactggcaagaca
atcactcttgaggttgaaccctcagataccatcgacaatgtcaaggccaaaatccaggac
aaagagggcatccccccagaccagcagcgtctgatctttgctggcaagcagctggaagat
ggccgcacattgtcggactacaacatccagaaagagtccaccctccatcttgttctgcgt
ctgcgtggtggtatgcagatcttcgtcaagactctgaccggcaaaacaatcactcttgag
gttgaaccttcagacaccatcgagaatgtcaaggccaagatccaggacaaggaaggtatc
cccccagaccagcagcgtctgatctttgctggcaagcagctggaagacggacgtacactg
tcagactacaacatccagaaagagtcgacccttcatctggtactgcgtctgcgtggaggt
atgcagatctttgtcaagaccctcactggcaagaccatcactcttgaagttgaaccctca
gataccatcgacaatgtcaaggccaagatccaggacaaggaaggcatccccccagaccag
cagcgtttgatctttgcaggcaagcagctggaagatggtcgcacattgtccgactacaac
atccagaaagagtccaccctccatctggttctgcgtctgcgtggaggtatgcagatcttc
gtcaagaccctgactggcaagacaatcactcttgaggttgagccttcagataccatcgag
aacgtcaaggccaagatccaggacaaagagggcatccccccagaccagcaacgtctgatc
tttgctggcaagcagctggaagacggacgtacactgtcagattacaacatccagaaagag
tccaccctccatctggttctgcgtctgcgtggaggtatgcagatcttcgtcaagaccctg
actggcaagacaatcactcttgaggttgaaccatcagacaccatcgagaatgtcaaggct
aaaatccaggacaaagagggcatccccccagaccagcagcgtttgatctttgctggcaag
cagctagaagatggccgcacattgtctgactacaacatccagaaagagtcaacccttcat
ctggtactgcgtctgcgtggaggtatgcagatctttgtcaagaccctcactggcaagaca
atcactcttgaagttgaaccttcagacaccatcgacaacgtcaaggccaaaatccaggac
aaagagggcatccccccagaccagcagcgtctgatctttgctggcaagcagctggaagat
ggccgcacattgtcggactacaacatccagaaagagtccaccctccatctggtactgcgt
ctgcgtggtggtatgcagatcttcgtcaagactctgaccggcaaaacaatcactcttgag
gttgagccttcagacaccatcgagaatgtcaaggccaagatccaggacaaggaaggcatc
cccccagaccagcagcgtttgatctttgctggcaagcagctggaagatggccgcacattg
tccgactacaacatccagaaagagtcgacccttcatctggtactgcgtctgcgtggaggt
atgcagatctttgtcaagaccctgactggcaagacaatcactcttgaggttgagccttca
gacaccatcgacaatgtcaaggccaagatccaggacaaggaaggcatccccccagaccag
cagcgtctgatctttgctggcaagcagctggaagatggccgcacattgtcagactacaac
atccagaaagagtccaccctccacttggtgctgcgtctgcgtggcggcaactaa
DBGET
integrated database retrieval system