Littorina saxatilis: 138969602
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Entry
138969602 CDS
T10665
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
lsax Littorina saxatilis
Pathway
lsax03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138969602
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsax01009
]
138969602
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsax04515
]
138969602
Protein phosphatases and associated proteins [BR:
lsax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138969602
Cell adhesion molecules [BR:
lsax04515
]
Cadherins
Protocadherins
138969602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
138969602
NCBI-ProteinID:
XP_070198560
LinkDB
All DBs
Position
LG6:complement(4111798..4165150)
Genome browser
AA seq
1353 aa
AA seq
DB search
MESSQQQGSEGMRIRMWGLWLVVVVVFLSCGPSVAQGQEEILHYKIQEESQVSTFVGNVA
RDSNLYNRFTQDEFQQLQYSISTQGSKFTIDENTSTIRTGHVLDREQECEFNSPTEPCEM
EFDVGVYKWEQTTELYDLIMIVHITVVLEDINDNSPTFPKDAVYLNVPESVPVGHVLLTS
GAIDTDTGPTNNINEYRILPDQNVFRLEVMPTVGGMSADLGIVLMRPLDREQQSTYRIQV
VAVDGGFPKRSGSVNITINVQDVNDNAPSFSKDLFNISVKEDSPSSVPILRLSAVDPDSA
HNGALTFAFSARTSQRIRDQFAVDQATGDVILVNPLDFEKDKRLQFMVEVKDHGSPTQQA
QAAVIVNVADVNDNAPQIDITLPPGGTNIAESIEVGSFIAHVSLSDADSGRNGEIACSLA
NPHFRLEKFSDFSYIYKILLQKGLDYEEDRQQRVNVSCSDRGEPPLHNSSSFTIHVRDEN
DNAPIFSKPEYHVTVRENMAPGLYVFQVIAMDPDTDNNGNITYTLIDNPNSAFSIDPVSG
ILRAMKKFDRETTLSYKLVVQARDRGTPAMSSSAIVHVGIDDVNDSPTHFAQSHFDFSVR
EEQPKGSVVDTLRVVDLDDMASGELQFSFLPEFMPPSEFDIDVYTGRITTTRPLDREKGD
TVFAFKVFVVDAENVYFNDTASVTVTITDINDHAPNITFPNKHNHTVRLPYTVPEGTIVT
KVIAHDQDLGKNGNDGFGYSVQGDSKDMFLMDGVTGELILTRRLEAGDAATYHLQVSVQD
SGKVVQMTTLANLDVVITLSNSSGLFAAGGKADHNIAIVITLVCVTVALALAVLATICII
RRIDRERKHHGHAKAEEQNIYKQETLPPASMEEKSPALENYENEIEKLKRKIKRELSFVS
DDDMHDSSSMSKGASFSTFKKSSPGSTMDHKLFSSPQASSSILQHSSLSPESSTGVKRVH
YVDKTREQLNRMTDSPPHHRPTSPAISPTGPSWTQQHGRPVTAGLTVRTEGEDAGSHTSG
STSDSGRGGSSEDDVHSHAGVCLGPESDDLRLHSGRGYLGNPTLSTFRSPTSARPERSLL
SSLASSQQPASSNSGGLNSTLTSTAPRSYLQAQGAHSNYSRNISFSDDSVTANTTVGQRT
LTTPQQEQQGRRGSNEESPTPTTNTPTPRGILCHRDSQFRYSTQPSPSSQRQHATPLTKS
LPYRRQLQQQQQQHQQRYSPPLPLPPDVSPLENRSGDDTYGVRGKVVNFSVADSYQMTPR
RAGSSSSPSSRSYKPSGDGGRGSPVYVNQTAGQSSLGQAYSMMDMDSVLQDRESTAATID
DEDRTTTTSGSYTINADDLCHEIDNLFFNDVVV
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggaatccagtcaacaacagggaagcgaagggatgagaatcaggatgtgggggttatgg
ctggtggttgtggtggtcttcctcagctgcggtccctccgtggctcaaggacaggaggag
atcctccactacaagatccaggaggaatcgcaggtgtcgaccttcgtgggcaacgtggcc
agggactcgaacctgtacaatcgcttcacgcaggacgagttccagcaactgcagtactcc
atctccacccagggctccaagttcaccatcgacgagaacacgagcacgatccgcacgggc
catgtgctggacagggagcaggagtgcgagttcaactcgcccactgagccctgcgagatg
gagttcgacgtaggcgtgtacaagtgggagcagaccacggagctgtacgacctcatcatg
atcgtgcacatcaccgtcgtgctggaggacatcaacgacaactcgcccacgttccccaaa
gacgccgtgtacctcaacgtgcccgagtccgtgcctgtcgggcacgtgctgctcacgagc
ggcgccatcgacacggacaccgggccaaccaacaacatcaacgagtaccgcatcctgccc
gaccagaacgtcttccgtctggaggtgatgcccaccgtgggcggcatgagcgctgacctg
ggcatcgtcctgatgcggccgcttgaccgcgagcagcagtccacctacaggattcaggtc
gtagccgttgacggaggcttccctaaacggtcggggtctgtcaacatcactatcaacgtc
caggacgtgaacgacaacgccccgtccttcagcaaagacctgttcaacatctcggtgaaa
gaagactctccctccagcgtccccatcctccgactgtcagccgtggatcccgacagcgct
cacaacggggccttgacttttgccttcagcgccagaacgtcgcaaagaatccgcgaccag
ttcgccgtggaccaggccacaggggacgtgattctggtcaacccgttggacttcgagaag
gacaagcgcctgcagttcatggtggaggtcaaggatcacggatcgcccacacagcaagcc
caggccgccgttatcgttaatgtcgccgacgtcaacgataacgcgccgcagattgacatc
accttgccgcctggaggcaccaacatcgccgagtccatcgaggtcggcagcttcatcgcg
cacgtgtcgctgtctgacgctgacagcggcaggaacggagagatcgcctgctccctcgcc
aacccgcacttcaggctggagaagttctccgacttttcctacatctacaagatcctgctg
cagaagggcctggactacgaggaggaccgccagcagcgcgtgaacgtctcgtgcagcgac
cgcggcgagcccccgctgcacaactcctcctcctttaccatccacgtgcgcgacgagaac
gacaacgcccccatcttctccaagcccgagtaccacgtcacggtgcgcgagaacatggcg
cccggcctctacgtcttccaggtcatcgccatggaccccgacaccgacaacaacggtaat
atcacctacaccctcatcgacaaccccaactccgccttcagtatcgacccggtgtccggc
atcctgcgagccatgaagaagtttgaccgcgagacgaccttgagttacaagctggtcgtc
caggccagggacagaggtaccccagccatgtcctcctctgccatcgtccacgtggggata
gacgacgtcaacgacagccccacgcacttcgcccagtcccactttgacttcagtgtgagg
gaggagcagcctaaggggtcagtggtggacacgctgcgagtagttgatctcgatgacatg
gcgtctggggagctgcagttctccttcctccctgagttcatgccgccttcagagttcgac
atcgacgtctacacgggcaggattaccaccacgcggccgctggacagggagaagggcgac
accgtgttcgccttcaaggtgttcgtggtggacgccgagaacgtctactttaacgacacg
gcgtcggtcaccgtcaccatcaccgacatcaacgaccacgcgcccaacatcacgttccct
aacaagcacaaccacaccgtgcgtctgccctacaccgtgcccgaaggcaccatcgtcacc
aaggtgatcgcccatgaccaggacctcggcaaaaacggcaacgacggcttcggctacagc
gtgcagggcgacagcaaggacatgttcctcatggacggcgtcacgggagaactgatcctc
acgcgccggctggaggccggggacgccgccacctaccacttgcaagtctcggtccaggac
agcggcaaggtcgttcagatgaccaccctggctaacctagacgtggtcatcacgctcagc
aactccagtggactgttcgctgcagggggcaaggctgaccacaacatcgccatcgtgatc
accctcgtctgcgtgaccgtggccctggctctagccgtcctcgccaccatctgcattatc
cgcaggatcgacagggagcgcaagcaccacggccatgccaaggcggaagagcagaacatc
tacaagcaggagactctgccgccagcctccatggaggagaagagtcccgcgctggagaac
tacgagaacgagatcgagaagctgaagcggaagattaaacgagagctgagttttgtgagc
gacgatgacatgcacgactcctcttccatgtccaagggcgcgtccttctccaccttcaag
aagagctcgcctggatctaccatggaccacaaactgttttcgagcccccaggcgtccagc
tccatactgcagcacagcagtctgtcgccagagagcagcacgggggtcaagcgcgtgcac
tacgtggacaagacgcgcgaacagctgaaccgtatgacggacagtccgccccaccaccgc
cccacctcgcccgccatctcacccactgggccatcgtggacacagcaacacgggcgtccc
gttacagcggggttgacggtgaggacggagggggaggatgccggtagtcacacgtcaggc
agtaccagtgacagtggtcgtggtggtagcagtgaggatgacgtacatagccacgccggc
gtctgtctcggccctgagtcggatgacctccgcctgcacagcggccgcggttacctaggc
aacccgactttgtccaccttccggagcccgacctcggcgcgtcctgagcgatccctgctg
tccagcctcgcgtccagccagcagccggcgagcagcaacagcgggggactcaacagcacg
ctgacctccactgccccgcgctcctacctccaggcccagggcgcccacagcaactacagc
cgcaacatcagcttcagcgacgacagcgtgacggccaacaccacggtgggtcagaggacg
ttgaccacgccgcagcaggagcagcagggcaggagggggagcaacgaggagagccccacc
cccaccaccaacacccccaccccgcgcggcattctgtgccacagagactctcagttccgc
tacagcacgcagccttccccgtcctctcagcgccagcacgccaccccgctcaccaagtcc
ctgccctacaggaggcagctacaacagcagcagcagcaacaccagcagcgctactctccc
cctctccccctcccgcccgacgtgtcgcccttggagaaccgcagcggggacgacacgtac
ggtgtccggggcaaggtggtcaacttctccgtggctgactcctaccagatgacgcctcgc
agggcgggctcctcctcctccccctcctcccgctcctacaagccgtcaggggacggcggg
aggggaagcccggtgtacgtgaaccagacggcgggtcagagctcgctgggtcaggcctac
tccatgatggacatggacagcgtcttgcaggaccgcgagagcacggccgccaccatcgac
gacgaggaccgcaccaccaccacctccggcagctacaccatcaacgccgacgacctctgc
cacgagatcgacaacctcttcttcaacgacgtcgtggtgtga
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