Littorina saxatilis: 138970672
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Entry
138970672 CDS
T10665
Name
(RefSeq) DNA damage-binding protein 1-like isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
lsax Littorina saxatilis
Pathway
lsax03420
Nucleotide excision repair
lsax04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138970672
09124 Replication and repair
03420 Nucleotide excision repair
138970672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsax04121
]
138970672
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138970672
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
138970672
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138970672
TCR (transcription coupled repair) factors
Cul4-CSA complex
138970672
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
138970672
NCBI-ProteinID:
XP_070199243
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Position
LG7:11546566..11578759
Genome browser
AA seq
1152 aa
AA seq
DB search
MAHINYIVTAHKPTAVSACETGNFTSPDDLNLIIAKNTRMEIYSVTPEGLRPVKEVGIYG
RICVMKLFRPVGESKDHMFVLTAKYNAMILECQQDGENIEIITRAHGNVQDRIGRPSETG
ILGIIDPQCRCIGLRLYDGLFKVIPLDKDNKELKAFNVRLEELSVIDIQFLHCCNHPTVA
LIHQDSSVKDHHGRHVRTYEISLRDKEFTKGPWKQNNVETEACMVIPVPEPYGGALIIGQ
ESVTYHKGDNYIPIAPPAIKLNPLICYGRVDSNGSRYLLGDMAGRLFMLLLEREEKMDGT
QVVKDLKVELLGETTIAECITYLDNGVVFIGSRLGDSQLVKLNVDPDENGSFVQIMETFV
NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHANIDLPGIKGIWPLK
MNTDDFDNLLVMSFVGQSRVLMLSGEEVEETELAGFDGDNQTFVCVNITKDQMLQITQRS
VRLVSLSGGGLLCEWTHPDGRNISLASCNTTQAVIAAGSELHYFELAPGQIKHAGQTTME
HEVACLDITPLKEGESLAELIAVGLWTDISSRVLRLPSFESLHTEMLGGEIIPRSILMAT
FEGLRYLLVALGDGSLFYFSLNPTTGLLTNKKKVTLGTQPTVLRPFRSMSTTNVFACSDR
PTVIYSSNHKLVFSNVNLREVNHMCPLNSEGYPDSLALANDTTLMIGTIDEIQKLHIRTI
PLGESPRRIAYQEASQTFGVISMRIDVAEGSSSANSGPIRPSASTQAQSLSSSAGSKPLG
PSSTGVGDMSDYICGEEQEIHSLLIIDQHTFEVLHAHQLMANECATSLISAKLGEDPNTY
YIVGTAFVNPEEAEPKQGRLMIFHYSEGKLTQLAEKEIKGAPYSMQDFNGKLLASINSSV
RLFEWTAEKELRLECSNFNNIIALYVKVKGDFVLVGDLMRSITLLAYKQREGQFEEIAKD
CNPNWMTAIEILDDDNFLGAENSFNLFTCQKDSAAATDEERSQMQECGLFHYGEFVNVFK
PGSLVMQHAGETLTPIQNTVLIGTVHGAVGLVSQIPQEFFNFLMDVQTRLANMIKSVGKI
DHSFWRSFHTERKTEAAQGFIDGDLIESFLDLTREKMAEVVQGLQIDDGSGMKRDATVED
LVKIVEELTRIH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcccacatcaattatattgttacagctcataaaccgacggcagtgagtgcctgtgaa
acaggtaacttcacgtcgccggatgacttgaacctgatcattgcaaagaacacacgcatg
gaaatttactctgtcacacctgaaggactgaggccagtgaaggaagttggaatctatggt
cgcatttgtgtcatgaagctcttcaggccggttggtgagagcaaagaccacatgtttgtg
ctgacagccaaatacaacgccatgattctggagtgtcagcaggacggagagaatatcgag
atcatcacacgtgcccatgggaatgttcaggatcggattggtcgtccatcggagacagga
attctgggtatcattgacccacagtgtcgctgcatcggccttcgtctgtatgacggtctg
ttcaaggtcatcccccttgacaaggacaacaaagagctgaaagctttcaatgttcggttg
gaagagctgtctgtgattgacatccaatttctgcactgctgtaaccaccccacagtggct
ctgatccaccaggattcgtctgtgaaggatcaccatggtcgacacgtcagaacatacgag
atttctctgcgcgacaaagagttcaccaaggggccttggaaacagaacaacgtggaaaca
gaagcttgcatggttatcccagttcctgaaccatacggaggagcattgattataggccag
gagtccgtcacataccacaagggagataactacatccctattgccccgccagcaatcaaa
ctaaatccactgatctgttacggtcgagtggactcgaacgggtctcgctacctgctgggg
gacatggctggacgactcttcatgctgctgttggaacgagaggaaaagatggacggcaca
caggtagtcaaggacctcaaggtggaactcctgggagagacaaccattgctgaatgcatc
acatatctggacaatggtgttgtgttcattggctccagactgggtgactcgcagcttgtg
aagttgaacgttgatccggatgagaacggcagctttgtacagatcatggaaacctttgtc
aaccttggccccattgtggacatgtgtgttgttgaccttgagagacaaggtcaaggacag
cttgtgacatgctctggtgccttcaaagaggggtccttgagaatcattcgaaatggtatc
ggcattcacgaacacgccaatattgacctccctggtatcaaaggaatctggcctctgaag
atgaacacggatgactttgacaacctgctggtgatgtccttcgtgggtcagtcgagggtc
ctcatgctgagcggagaggaggtggaggagacggagctggcgggtttcgacggagacaac
cagacctttgtgtgcgtcaacatcaccaaggatcagatgctacaaatcacccagcgatca
gtgcgactggtcagcctgtcaggagggggactgctgtgtgagtggacacacccggacggt
cgcaacatcagtctggccagctgtaacaccacgcaggccgtcatcgctgccggctccgag
ctgcactactttgaactggctcccggacaaatcaaacacgcaggacaaacgacaatggag
cacgaagttgcctgtctggacatcacgccgctgaaagaaggagagagtctcgctgagctc
attgccgtgggactgtggacagacatatcttcgcgggttctgcgtctgcccagctttgag
agtctgcacacggaaatgttaggaggagagatcatcccgaggtccattctgatggccacc
tttgaaggacttcgctatctgctggtcgccctcggtgatggatctctcttctacttctca
ctgaatccaaccactggcctgctgaccaacaagaagaaggtgacgctgggcacacaaccc
acagtgctgcgtcccttccgctccatgtccaccaccaacgtcttcgcctgctccgaccgc
cccaccgtcatctactcttccaaccacaagctggtcttctccaacgtcaacctcagagag
gtcaaccacatgtgtccgctcaactccgagggatacccagacagtcttgctctggccaac
gacactaccttgatgatcggcaccatcgacgagattcagaaacttcacatccgtaccatc
cctctgggagagtcaccgaggaggatagcctaccaggaagcatcacagacgtttggcgtc
atctccatgaggatcgacgtggcggagggcagcagttcagctaattccggtcccattcgc
cccagtgccagcacacaggcccaaagtctgagcagcagtgcaggatccaaacctttaggt
ccgtcatccacaggggtgggtgacatgagcgactacatctgtggggaggaacaagagatc
cactccctgctcatcatcgaccaacacacattcgaagtattacacgcacaccagctgatg
gcgaacgaatgcgccacgagcctcatctcggccaagctgggggaagacccaaacacgtac
tacatcgtgggcacagcattcgtcaatccggaggaggcggagcctaaacagggtcgactc
atgatcttccactacagtgaaggcaagctgacccagctagcggagaaggagatcaagggg
gcgccgtactccatgcaggacttcaacggcaaacttctggccagcatcaacagcagtgta
cgactgtttgagtggacggcggagaaagaactgcgactggagtgcagcaacttcaacaac
atcatcgccctctacgtcaaggtcaagggcgactttgtgctggtgggcgacctcatgcgc
tccatcacgcttctcgcatacaagcagcgcgaaggacagttcgaagagattgccaaagac
tgtaaccccaactggatgacggccatagagattctggacgatgacaacttcctgggcgca
gagaactccttcaacctcttcacgtgtcaaaaagacagtgctgcggccacagatgaagag
cgatcacagatgcaagaatgcgggctgttccactacggagaatttgttaacgtcttcaag
ccaggctccctggtgatgcagcatgcaggggagaccttaaccccaatccagaacacagta
ctgattggaaccgtacatggagcagtgggactggtgtctcagattccccaggagttcttc
aacttcctcatggacgttcagacacggctcgccaacatgatcaagagcgtcggcaagatc
gaccactcattctggcgatcgttccacacggagcgcaagacagaggctgcacagggattc
atcgacggcgacctcattgagagttttctagatctgacgcgggaaaagatggcggaggtc
gttcagggattacagattgatgatggaagtggaatgaagagagacgccacagtggaagac
ctggtgaaaatagtggaagagctgacgaggattcattga
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