Littorina saxatilis: 138970698
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Entry
138970698 CDS
T10665
Name
(RefSeq) deubiquitinating protein VCPIP1-like isoform X1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsax01002
]
138970698
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsax04121
]
138970698
Enzymes [BR:
lsax01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
138970698
Peptidases and inhibitors [BR:
lsax01002
]
Cysteine peptidases
Family C64
138970698
Ubiquitin system [BR:
lsax04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
138970698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
DUF5817
Motif
Other DBs
NCBI-GeneID:
138970698
NCBI-ProteinID:
XP_070199279
LinkDB
All DBs
Position
LG7:complement(11974259..12002798)
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AA seq
1188 aa
AA seq
DB search
MEDVSIYHISDDVTVVVLPKGTAQQYLPMEVSDSNEPSSRGFLYSGNCPDPSCQTKLTCW
STYSTVECSGCGQRHDVKALQNLKQEKEDAYNTALYTIKSIIAGIKPEPGTDNIKVYGLS
NYKCKLLSPLLSQYGMEKGTGRAKLLTEMGQPPVFDCGVLCDRAFCIDPEHINVPGYGRD
TSGSAEYLKDTLNIAMDMNENEERLVPIHVDGDGHCLVHAISRALVGRELFYHPLRLNLM
NHFRDNLDRYKNLFEDFVDVDEWEDIISECDPDFIPKEGESVGLRNIHIFGLANVLKRPI
LLLDSPKGIESSGDYSGVFLPAFQTPEQCKNKTGVLNYPLCVAWSSQGRNHFIPLVGVKG
KPSPRLPRFMLQTTWGVQDPTLLDAYINFENGCCTVGGSRMLQESYIQRLVSAMEEVFTE
KHGVHPDLVADVHRYIFRSKGYSGLPDYVTKEAHRLVKEKSLLICLCCGCLTALNVEKDM
LRKGGELYNLACKELGDLKPKKLYIFKENQLSCQYDPDKDELVPDISQHVCPFCKSENKF
RHVQADGSVEYSDGDVTREPAGPKSKCSCGFKHYYGGKYYDNRPRELQVPLEWGGKKVVE
VVQWWENESDPQLNSNAYQEAQTLIQKHFPGEFGIELLEQKIVAAILRLTAIKEEKDTAA
VCDGAEPQKWNAEEASKIILSGMQTQSIHKEELSQSETERQVKKKITANAPQQQARKSSD
GSAGMRKGSASNSPARTVSSKDKGTGDKPPSPLSGSPTAAPKPTSPPSTHKANEKKVRIV
SADGHSETVTLTEDLTFSQLQEVVHKATHVRPEHQKLRLGFPPKVMAPPAPGQEDAIVPL
NHGDKINVERTASEGSSRQSRSPRGSVRRQFDDRMPNEEAMLNTLAARNSGDVIDGSLIS
MGLLAAQMGADLWGLVQNQPHHFSVGGVYYRQAQRDVGLEPDKHCTFPTLPDKTFCYNAA
LDRLELCLGELGHFEVEPGIERKAENRQVQGHKHHGHSSHHASGSASSSGSGAYRRDDSS
SVATFGTSGAVSKNHTSQKVFEGQGHTLRDASLDTKMPEDVPLTENIRGAARRLQHFCDP
VHGQSSIDEEPEGMEVAEVKASATGGQGEGMPQAKYTRKGPGYSVLEPKHRPAQTMEEMQ
KLFQNLEDVIAASEQMEAEEEGGAGEGAAQREEKRQQEDVKAEVMETT
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtaagcatctaccacatcagtgacgacgtcacagtcgttgtcttaccgaaa
ggaactgctcaacagtatcttcctatggaggtaagcgactccaatgagccttcatccaga
ggcttcctgtacagcggcaactgccccgacccgagctgtcaaacaaagctgacgtgctgg
tcaacttactccacggtagagtgctcgggctgcggccagcgtcacgacgtgaaggcgttg
cagaatctgaagcaggagaaagaggatgcttacaacacagccctgtacaccatcaagtcc
atcatcgctggcatcaagccagaaccaggcacagataatatcaaggtttatgggctgtca
aactacaaatgcaagctgttgtcaccgctgctgagtcagtatggcatggagaagggtaca
ggccgcgccaaactcctcacagagatgggccagcccccggtcttcgactgtggcgtgctg
tgcgaccgagccttctgcatcgaccccgagcacatcaacgtcccgggctacggccgcgac
accagcggcagcgccgagtacctcaaggacaccttgaacatcgccatggatatgaacgaa
aacgaggagcgcctcgtaccaatccacgtggatggagacggtcactgcctagtacacgca
atctcgagagccctggtggggcgagagctgttctatcacccgctgaggctgaacctgatg
aaccacttcagagacaacctggaccgctataagaatctcttcgaggactttgtggacgtg
gacgagtgggaagacatcatcagcgagtgcgacccggacttcatccccaaggagggggag
agtgtggggctgaggaacatccatatcttcgggctggccaacgtcctcaagcggcccatc
ctcctcctagacagccccaagggcatcgagagttccggggactactcaggtgtgtttctg
ccagcattccagaccccagaacagtgcaagaacaagaccggggttctcaattatccactc
tgcgttgcatggagcagtcaagggcgaaatcatttcatccctctcgtcggtgtcaaaggc
aagcccagtccacggttgccacgcttcatgcttcagacaacgtggggagttcaggacccg
accctgctggatgcctacatcaactttgagaatggatgctgcactgtgggcggatccagg
atgctccaggagagttacattcagcgtctggtgtcagccatggaggaagtcttcacagaa
aaacatggcgtccaccctgacttggtggccgatgttcatcgatacatcttcaggtcaaag
ggttattctggtctgccggattacgtgacaaaagaagcgcaccgcctggtgaaagagaag
tcgctgttgatctgtctgtgctgcggctgtctgacggccctcaacgtggagaaagacatg
ctgcgcaaagggggagaactctacaacctggcgtgcaaagagctgggtgacttgaagccc
aagaagctctacatcttcaaggaaaaccaactttcatgtcaatacgacccagacaaggat
gaactcgtgccagacatctcacagcatgtttgcccattttgcaagtctgagaacaagttc
cggcacgtgcaagcagacggcagtgtggaatactctgatggggacgtgacccgcgagcca
gccggacccaaatccaagtgcagctgtggattcaaacattactacggtggaaagtactac
gacaacaggcctagagaactgcaagtgccgttggaatggggcggcaagaaggtggtggag
gtggtgcagtggtgggagaatgagtcggacccccagctcaacagcaatgcctaccaggag
gcccagacccttatccagaaacacttccctggtgagtttggaatcgagctgctggagcag
aagatcgtggcggccatcctgcgtctgacggctatcaaggaggagaaggatactgcggct
gtctgtgacggcgccgagccacaaaagtggaatgcagaggaagcctccaaaatcatcctc
tcagggatgcagacgcagagcattcacaaagaggagctgtcacagagtgagacggagcgg
caagtgaagaagaagatcacagccaatgctcctcagcagcaggccaggaagtccagtgac
ggctctgccggtatgaggaaaggctctgctagcaacagtccagcaaggacggtgtcaagc
aaagacaagggtacaggagacaaaccgccctcaccgctgtcaggctcgcccaccgcagcc
cccaaaccaacctctcctccctccacccacaaagccaacgagaagaaagtccgcatcgtc
tccgctgatggacattctgaaacggtgaccttgacggaagatctgaccttcagccagctg
caggaggtcgttcacaaggccacccatgtgagaccggagcatcagaagctgcgtcttggg
ttcccgcccaaggtcatggcaccccccgcccctgggcaagaggacgccatcgtaccgctc
aaccacggtgacaagatcaacgtggagagaacagcgtctgaaggttcttcaaggcaatct
cggtcacctcgcggttcagtgcgacgacaatttgacgatcgtatgcccaacgaggaagct
atgctgaacaccctggctgccagaaattcgggcgacgtgatagacggctcgctgatcagc
atgggtttgctggcggcacagatgggggcggatctgtggggcttggttcaaaaccaacct
caccacttctccgtgggcggggtgtattaccgccaggcccagagggacgttgggttggaa
cccgacaaacactgcaccttccctactctgcctgacaagaccttctgctacaacgctgca
ctggaccgtctagagctgtgtctaggagagctgggtcactttgaggtggagccgggcatc
gagagaaaggccgagaaccgtcaagttcaaggtcacaaacaccacggtcacagttctcac
cacgcttcagggtcagcgtctagttcaggttctggtgcctaccgtagagacgactcctcc
tctgtagcgacatttggcaccagcggagccgtcagcaagaatcacacctcacagaaagtc
tttgaaggtcaaggtcacaccctgcgagatgcgtccttggacacgaaaatgcccgaagat
gtgcctttgacagaaaacatccgtggggcagctcggcggctgcagcatttctgtgacccc
gttcacggacagtcgtccatcgatgaggagccagagggcatggaggtcgcggaggtgaag
gccagtgctactggaggtcaaggtgaagggatgcctcaggccaaatacacacgcaagggc
ccaggatacagtgttctggagcccaaacaccgaccagcgcagaccatggaagaaatgcag
aaactgttccagaatttggaggacgtaattgcggccagtgagcagatggaagcggaggag
gaggggggagcaggggagggggcagcacagagagaggagaagagacagcaagaagacgtg
aaggcggaggtgatggaaacaacataa
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integrated database retrieval system
