Littorina saxatilis: 138970756
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Entry
138970756 CDS
T10665
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
lsax Littorina saxatilis
Pathway
lsax04140
Autophagy - animal
lsax04142
Lysosome biogenesis
lsax04145
Phagocytosis
lsax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138970756
04142 Lysosome biogenesis
138970756
04140 Autophagy - animal
138970756
04148 Efferocytosis
138970756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138970756
Membrane trafficking [BR:
lsax04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138970756
Hops complex
138970756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
TPR_Vps41
zf-RING_11
TssO
zf-RING_2
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
INF24-like
zf-RING_Vps41
CSLinker
SPC25_N
zf-rbx1
PspA_IM30
zf-C3HC4
UPF0184
ACBP4_C
EzrA
RBSN_mid
ZapB_rel
DUF1664
zf-C3H2C3
aq_1631
Motif
Other DBs
NCBI-GeneID:
138970756
NCBI-ProteinID:
XP_070199357
LinkDB
All DBs
Position
LG7:14362834..14414474
Genome browser
AA seq
979 aa
AA seq
DB search
MASILDQYEEESTRSVSGRSVPTTLQDMMMPGFIEKKMESEEPIFSRVKLNYKPNATITH
LCAGNNTLVVAQSTNILVRVEIESQTTSEIELPSPVTDRVHQIFLDPTGRHLIVSMNSQD
NYYISLGTSTKKPKPIAKLKGHLLEAVGWNWQNANEKSTGAILIGTSKGLIFETELTQFE
DSRFFQGNIEIYLKQLFNLGREKMEPVTGLQFDRMPCADLAVYKYYILATTPGRLYQFIG
NVSTSAEPPMFTPLFQPYESGSDHPQFLELPGNFGYSDLHLFFPKFRQPAQTFAWLTGPG
IYFGNIDVTGSAGPNSVITNAKLIPYPKDSEDVGVNPIGMVLTEFHMMVLYPTRMRAVCS
LNEQVILDDVIPERFGRLLGIRKDPIRGGIWAYTSQAVFVYKISRESRDVWQMYLSKGDF
ELAKRYCQNSHNMEQVLIKQAEHLFEACCYEESAALYAKTHNPFEEVALKFIRLPDKEPL
QTFIMEKLNSLKPQDKTQLTMLVTWLVELFLTSLGRLKDQGQDESPQYEGVQESFRNFMA
SSRIKECITLNRSVIYDLIASHGDVEDLVFFARLMEDYERVISHHIQHENYRGALECLVK
QPDIEMYYKFSPLLMQHLPKETVDAWIRQGRQLDPKRLIPALVQYDPKSKDQGNEAILYL
EMCVQKLDNHDPAIHNFLLSLYAKHQPDDLMTYLQLQGEDPDEIYYDVKYALRLCSEHKH
QKACVHVYSLMGLYEEAVDMALGVDVELAKQQANKPNEDDVELRKKLWLRIARHVVQDQK
DIRRAMEFLHECDLLKIEDILPFFPDFVTIDHFKDAIISSLQEYNQHIDSLKEEMEEATQ
SAEEIRREIQSFRNKYTTVKPEEKCTVCNYPLMTRSFYLFPCTHKFHMDCLIAEVLPSLQ
TSKKSQVEGLQRKLAETDGSPTTARPTRGPSGTARMEVQQKLDGLVSSECIYCGDFMIRC
VDKLFVEEENWESAVAEWE
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccattttagaccagtatgaggaagagtccacacggtctgtttcaggcagatct
gtgccaaccacactgcaagacatgatgatgccagggtttatcgaaaagaaaatggagagt
gaggaaccaattttcagcagagtgaaactgaattacaaaccaaatgctacaattactcat
ctgtgtgctgggaacaacacactggttgtggctcagtcaacaaacattctggtccgggtg
gagattgagtcacagacaacatcggagatagagcttccaagccccgtgacggacagagtg
catcaaatatttctggaccccacggggcggcatctgatcgtgtccatgaattctcaggac
aactactacatctctctgggaacatccaccaaaaagccaaagcccatcgcgaaactcaag
ggtcatttacttgaagcggtcggttggaactggcagaatgctaatgaaaaatctacagga
gccattttgattggtactagcaaaggcttgatatttgaaactgagctcacacagtttgaa
gacagcagatttttccaaggcaacattgaaatctatctgaaacagctgttcaaccttggg
agggaaaagatggagcctgtcaccgggttgcagtttgaccgcatgccctgtgcagatctg
gctgtctacaagtactatattctggccaccacaccggggcgcctgtaccagttcattggc
aatgtgtcaaccagcgctgaacctcccatgttcacccctctgtttcaaccctatgagagt
ggatctgaccacccgcagttcctcgagttgcccggaaactttggctacagtgaccttcac
ctcttcttccccaaattccggcaaccagctcagacttttgcctggctcacaggtccagga
atctattttgggaacattgacgtgacgggatcagctggcccaaactctgtcatcaccaat
gccaaactaataccatacccaaaagacagtgaggatgtcggtgtcaaccctatcggcatg
gtgctcacagagttccacatgatggtcctctatcccaccagaatgagagctgtctgttct
ctgaatgaacaagttatcttggatgatgttataccagagagattcggcagactgctgggt
atcaggaaggatcccatccggggagggatttgggcctacacctcccaggctgtctttgtc
tacaaaatatccagagaatcaagagatgtatggcagatgtacctcagcaaaggagacttt
gagctggccaagagatactgtcagaatagtcacaacatggagcaagttctgatcaaacag
gcggaacatctgtttgaggcgtgctgctatgaggagagcgcagccttatacgcgaagacc
cacaatccttttgaggaggtggcactgaaattcatccgtcttcctgacaaagaaccactc
cagacattcatcatggaaaaactcaactccctgaaaccacaggacaagacccagctgacc
atgctggtgacgtggctggtggagctgttcctgacctcgctgggccgactcaaggaccag
ggtcaggacgagtcgccgcaatacgaaggcgtgcaggaaagcttcagaaatttcatggcc
agctctcgcatcaaggagtgcatcacactaaatcgctcagtgatctacgatctcattgca
agtcacggggatgtggaggaccttgtcttcttcgctcgactcatggaagactacgaacgt
gtgatcagccatcacattcagcacgagaactacagaggagccctggagtgcctggtcaaa
cagcctgacatagaaatgtattacaagttcagcccactgctgatgcagcacttacccaaa
gagactgtggatgcttggatcagacaagggagacaactggatcccaagaggctgattcct
gcccttgttcagtatgaccccaaaagcaaggatcaggggaacgaagccattctctacctg
gagatgtgcgttcagaagctggacaaccacgaccccgccatccacaactttctcttgtcg
ctctacgcaaaacatcagcccgatgatctcatgacttacctgcagttacagggagaggac
cctgatgagatttactacgacgtgaaatacgccctgcgcctgtgctcagaacacaagcac
cagaaagcgtgcgttcatgtctactccctgatgggtctgtacgaagaggctgtggacatg
gcactaggggttgacgtggaactagcaaagcagcaggctaacaaacccaatgaggatgat
gtggagttgcgcaagaagctgtggctgcgtatcgcgcgccatgttgtgcaagaccagaaa
gacatccgccgtgccatggagtttctgcacgagtgtgacctgctcaagatagaagacatc
ctgcccttcttcccagactttgtcaccattgaccactttaaggatgccatcatatcgtca
ctgcaagagtacaaccagcacattgactctctcaaggaagagatggaggaagctacccag
agtgcagaggaaatccgacgagaaattcagagcttccgcaacaagtacacaaccgtgaaa
ccagaagagaagtgcacggtgtgtaactaccctctgatgactcgctccttctacctcttc
ccctgcacacacaagtttcacatggactgtctcattgccgaggtgttaccaagcctccag
acgtccaagaaatcgcaggtggaagggttgcagagaaagctggccgagacggacggcagc
cccaccaccgccaggccgaccagggggccctctggcaccgcccgcatggaagtgcagcaa
aaactggatggtctggtgtcatctgagtgcatctactgtggagatttcatgatcagatgt
gtggacaagctgtttgtggaggaggagaactgggagagtgctgtggcagaatgggagtga
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