Littorina saxatilis: 138970835
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Entry
138970835 CDS
T10665
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
lsax Littorina saxatilis
Pathway
lsax04148
Efferocytosis
Brite
Membrane trafficking [BR:
lsax04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138970835
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
DUF6261
Motif
Other DBs
NCBI-GeneID:
138970835
NCBI-ProteinID:
XP_070199484
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Position
LG7:complement(18103503..18128333)
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AA seq
863 aa
AA seq
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MSIKAFELVPAIERVKLMSDKAKTQIECLDVCGKNVYIGTNDCFVVHYSIEEETNSSGRV
SFKTEKQGHKFLTVKKPVVQIKTASALNRIMVLCDNTLTLLNMLDLEPIMTGAKVKGVSC
FCINENPIRTNPFSVEICVALKKKTVQLYTVTEDRLMHLRDLHIPDPAVAVGIDGIHVCA
GLATSYNMINSETGQDQFLFPFDAENNKPIIKRISKEEFLLSGPSALGMFVSSAGNSKRP
PISWSENLLSIGYVHPYIVAMNDEFITVHSILDMQQKQAIPFQGGAALDNFDGRLFVASG
REVYALVPVPFEKQIQALLADKRVTEALDLAKNANRTGMTRDKFLKMYRRIQQQAGFIQF
AQKEFEQARTLFLESEIDVRELISVYPHLLPSNCNFTRSVPALHEIADVTQLVKGDNSLL
ADFKYFLRTYLEEIRGTKAAYGFKQEIDVALLKVYAETNSPELQTLVAVDTGCDLHDCVE
WLTKYGRFHALALLYKYHGENDKALGVWTKLVDDGVKDEAFPGLIFIVEVLANLSDHELV
WKYIDWVLEKDEEMGVKVLTERPANDPPSERLRPDAVIDYLHRFPSAVITYLEYLVFQRK
LEKETYHTHLAVLYLDNVLRLMKKDNVKKEELDSARSKLRHMLQMSSLYRVQLILGKAKE
TDMHAECAILYGKLEEHDKALRILVHKLKDFGGAENYCLVNSEGKDPAYRKRLFHILLSV
YLDPSYERRDTLITPAVTLLNSSVAEFDTIKVLQLLPDNWSVGLLSQFLTRAVRSSMHNS
RMTRIERMMSRVENLRCKEQCIELQRDPVVVNEERLCAVCKRAFNDPTFVRYPNGVVTHV
HCAKNKFICPVTGRLFSSGSGAS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaaagcatttgagcttgtacccgccattgagcgggtcaagctgatgtctgac
aaggctaaaacacagattgaatgcctagatgtgtgtggaaagaatgtttacataggaaca
aatgattgctttgtggttcactacagtattgaggaagagactaacagctcaggccgtgtc
agcttcaagactgaaaaacaaggtcacaagtttctgactgtgaagaagccagtggtacag
atcaaaaccgcctcagccttgaacagaatcatggtgctgtgtgacaacacgctgacactg
ctcaacatgttggacctcgagccaatcatgacaggagctaaggtcaaaggggtgagctgt
ttctgcatcaacgaaaatcccattcgaacaaacccattcagtgttgagatctgtgtggcg
ctgaagaagaagacagtacagctgtacaccgtgacagaagacagactgatgcacctgcgc
gaccttcacatacctgaccctgctgtagctgtaggaatagatggcatccatgtctgtgca
ggacttgctacttcctacaacatgatcaactccgaaaccggacaggaccagtttctcttt
ccttttgacgccgagaacaacaaacccatcatcaaacgtatcagcaaggaggagtttcta
ctcagcggtccgtctgcacttgggatgtttgtgtcgtctgctggcaactcaaagcgaccg
cccatctcgtggtccgaaaacttgctgtccatcggctatgtccacccctacattgtggcc
atgaatgatgaattcatcaccgttcacagtattttagacatgcagcagaagcaggccatt
cccttccaaggtggagccgctcttgacaattttgatggtcgactttttgtggcgtctggg
agagaggtgtacgccctggtgcctgtgccctttgaaaaacaaattcaagcactgttagct
gacaagcgggtgacagaggctctggatctggcgaagaatgccaatcgcactggcatgacg
agggacaagtttctaaagatgtatcgacggattcagcagcaggcaggatttatacagttt
gcgcagaaagaatttgaacaagccaggaccctgtttctggagagcgagattgatgtcaga
gagctgatcagtgtgtacccgcacctcctgccgtccaactgcaacttcacgcgctcggtc
cccgctctgcacgagatcgccgacgtcacccagctggtgaagggggacaactctctgctg
gctgacttcaagtacttcctgcgcacctacctggaggagatccgcggaacaaaggccgct
tatggcttcaagcaggaaatagatgttgcactgctgaaggtttacgcagaaaccaactcc
ccggaacttcagactctggttgccgtggatacaggctgtgatttgcatgactgtgtggag
tggctgaccaaatatggacgcttccatgcgctggcgcttctttacaagtaccatggtgaa
aacgacaaggctttgggagtatggaccaagcttgtagatgatggagttaaagacgaagct
ttcccaggtctcattttcattgtggaagttttggccaacctgagtgaccatgaactggtg
tggaaatacattgactgggtgctggagaaggatgaagaaatgggagttaaggtgctgacc
gagagaccagccaatgatccgccttcggagcgactgcgacccgatgccgtcattgactat
ctgcatcgcttcccttctgctgtcatcacttacctggaatacctcgtctttcagagaaaa
ctggagaaagaaacgtaccacacccacctggcagtgctctacctggacaacgtcctgcgg
ctgatgaagaaagacaatgtcaaaaaggaagagctggacagtgccagatccaagctgcgt
cacatgctgcagatgtccagtttgtaccgtgtacagctgattctgggcaaggccaaggag
acggacatgcacgctgagtgcgccattctctacggcaagttggaggagcacgacaaagca
ctgaggatcctggtgcacaagctgaaagactttgggggggccgagaactactgcctggtc
aactctgagggcaaggaccccgcctaccgcaagcgtctcttccacattctgctcagcgtc
tacctcgacccgtcttatgagaggagagatacgctcatcacaccagctgtgacccttctc
aacagtagtgtggcagagtttgacacaatcaaggtgttacaactgttgcctgacaactgg
tcggtgggcttgttgagtcagttcctgacgcgcgctgttcgctcaagcatgcacaacagc
cgcatgacgcgcatcgaaagaatgatgtcgcgcgtcgagaatctacgctgcaaggaacag
tgtatagaactgcagagagaccctgtggtggtgaacgaagaaaggctgtgtgcagtatgc
aagcgagccttcaacgacccgaccttcgtccggtaccccaacggtgtggtcactcacgtc
cactgcgccaagaacaagttcatctgtccggtcactggccgtctcttcagctctggcagt
ggggccagctga
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