Littorina saxatilis: 138971416
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Entry
138971416 CDS
T10665
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
lsax Littorina saxatilis
Pathway
lsax04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138971416
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_R13L1-DRL21
LRR_9
LRR_NLRC4
LRR_LRWD1
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
138971416
NCBI-ProteinID:
XP_070200244
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Position
LG7:complement(38490331..38534786)
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AA seq
608 aa
AA seq
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MSTRRSRSRDNSNSETAGRLANWQNPPDSVVPYSIGGSESPDVDTMRGGDTNMEDVTTHL
ETASIRDERDARTDKKSSVGSVVMDPNAKRQVSVTVPGQNKPKPTVSGRPTVKADLDVTK
ELKKCKEEGAKRLDLSKSQISTLPTSMKELTQLSELYLYGNRLCSLPPEVGCLTSLQTLA
LSENSITSLPDSLAALTKLHVLDLRHNKLQEIPKVVYQLRSLTTLFLRFNRIRIVEDEVR
NLVNLTKFSLRENKIRELPRGIGQLVNLLTFDISHNHLEHLPEDIGNCVNLNSLDLQHNE
LLDIPESIGNLRALNRLGLRYNRLTSIPRSLANCENMEEFNVEGNNISQLPECLLSSLSN
LTSITLSRNKFEKYPTGGPAQFRSVYSINMEHNQINNIPLGIFSRATALTKLNMKDNQLT
ALPLDMGSWVNMVELSLGTNQLTKIPDDIKSLQKLEVLILSNNALRKLPSTIGELSRLRV
LDLEENRLESLPQEIGALRELQRLVVQSNQLTSLPRTIGLLKNLQYLGAGENNLTSIPPE
IGSLESLESLYINDNPELHSLPYELAYCSNLQIMSIENCPLSQIPAEIVARGPSLVIQYL
KLQGPYCQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcgcagaagtcggtctcgcgataattccaactctgagacagctgggagactt
gctaactggcagaaccctcctgacagtgttgtgccatattccattggtggatctgagtca
cctgacgttgatactatgcgtggaggagacactaacatggaggacgtgacaactcatctc
gaaactgcatccatcagggatgaacgtgacgccagaacagacaagaagagcagcgtagga
tcggtggtgatggatcctaacgctaagcgacaggtgtctgtaaccgtacccggccagaac
aagccaaaacccaccgttagtgggcgccccactgtcaaggctgatttggatgtgaccaaa
gagttgaagaaatgcaaggaagaaggagccaagagattggacctcagcaagtctcagatt
tctactctccccacgtcaatgaaggagttgacccagctgtcggagctgtacctgtacggc
aacaggttgtgctcgttgccgccagaggtgggctgtctgacctccctgcagacgctggcc
ctcagtgagaactccatcacctcactgccagactcgctggccgcgctcaccaagctccac
gtccttgaccttcggcataataagttgcaagagattccaaaagtggtataccagcttagg
tcgttgacaacacttttcctgcgcttcaacaggatacgaatagtggaagatgaagttagg
aatcttgtaaatttgacaaagttcagcttacgagaaaacaagatccgtgagttgccgaga
gggattggacagttagtgaatctgctgacctttgacatttcccacaatcacctggaacac
ttacctgaagacatcggcaactgtgtcaacttgaattcccttgaccttcagcataatgag
ctgctggacatcccagaaagcatcggcaatctccgtgccctcaacagactgggcctcagg
tacaacaggttgaccagcatacctcgctccctggccaactgtgagaacatggaggagttc
aacgtagaaggaaacaacatatcacaactcccagagtgcctgttgtccagcctgtccaac
ctgaccagtatcactctgtcccgcaacaagtttgagaaatatcccactggtgggcctgca
cagttcagatcggtctactccatcaacatggagcacaaccagatcaacaacatcccactg
ggcatcttctcgcgggccacagcactgaccaagctgaacatgaaggacaaccagctgacc
gccctgccgctggacatggggtcctgggtcaacatggtggagctgtcgctgggcaccaac
cagctgaccaagatccccgacgacatcaagtccctgcagaagctggaggtcctgatcctc
tccaacaacgccctgaggaaactcccatctacaatcggagagctcagtcgacttagagtc
ttggacctggaagaaaacagactagaaagcttgccgcaagaaatcggagcactgagggag
cttcagcgactggtggtgcagtcaaaccagctgacaagcctgccgcgcaccattggcttg
ctgaagaacttgcagtaccttggggctggagaaaacaatttgacatccattccacctgaa
ataggatcgctggagagcctggagtccctgtacatcaacgacaaccctgagctccacagc
ctgccctatgagctggcctactgctccaacctgcaaatcatgagcatcgagaactgcccc
ctctcacagatccctgcagagatcgtggctcgcggcccttcccttgtcatacagtacctc
aagcttcaaggcccgtactgccagtaa
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