Littorina saxatilis: 138971751
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Entry
138971751 CDS
T10665
Name
(RefSeq) protocadherin gamma-A12-like
KO
K16498
protocadherin delta 1
Organism
lsax Littorina saxatilis
Pathway
lsax03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138971751
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsax01009
]
138971751
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsax04515
]
138971751
Protein phosphatases and associated proteins [BR:
lsax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138971751
Cell adhesion molecules [BR:
lsax04515
]
Cadherins
Protocadherins
138971751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6338
DUF5527
Motif
Other DBs
NCBI-GeneID:
138971751
NCBI-ProteinID:
XP_070200681
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Position
LG1:30639792..30703402
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AA seq
1221 aa
AA seq
DB search
MVVLLSVLPLYHAQNKELSYSMYEEGPVPSLVGNISRDSNVSQLLGTDVFATLRYRVLSQ
PDTNSALFSVGNTTGLLMTAARIDRESLCHFSENCRLLVYVAIQQSAGAYFVTVKVNVNI
RDINDNDPQFPQNSMSVPVTENSGRESIDIIPAMDLDIGKNTIQTFDVVAEDPTMFRLEV
TPNLDGSLVPNLVVLRELDREERDFYKVVILAKDGGSPMRTGVLTLNITVEDVNDNPPEF
TANEYNVNVNETLPRDTVVATVRATDRDIGFNGEVRYRFSPRQTDDNANAFTIHDTTGEI
RTVQDLTHLQGKTLRLVVEAVDRGTKPLKAQAVVNVKIIDAVNNYPNIRLTTISGGNVSL
VKESAPTGYVVAHFIVVDTDSGTNGIVSCSVSGGNFALQKLVDKEYKITLVGTLNREQRD
RFDVNVRCWDFGRPSSLTSSVSFSVIVEDVNDNSPIFSRKLYRRNVTEEQGPGVLMRVHA
VDADMGENGRVTYRLGNISSFMTSLIQVVENGDIVARASFDREVYKVLDFIVVAEDHGVP
QNSATARVIFDIVDINDRKPSLPVGYTIKVAENQPRDTVVGTIKAIDEDEGDSGKIAYHL
LSDNNATRFFTVEKSGIVRTKVKFDRETREFYHLSVLANDQGDPPNTNILSVTVEITDEN
DNTPRFLRPNDTFSVVNISSVTPARAVIFLAKVEDKDAGNNAVVDFGFASDNYGAFTINR
TTGAVSTIRNLQPMDSGTYRLVLLARDRGVGGARSAIATLSVVVVAENATMLASGQEIED
HVIIVVVLVCLTVLTTACVVAILLRLRHTDRRERRHHHHHHHGLPPESKAAYHLREVKGS
GSSLSGGGSNGGGGGGGGGGGGGGGVGRGGGGNGGVGNAMGKDKGSWGGYDAVKGHGVEE
TGTPELGRESDDDLILFKLQLAEQYKEKDMYSNSKNGKASHLDKPQTDEMMSSSSRETNG
TDSGRGCSEDDSQAVESIRSEAESGFASFLAMPLKDGWRHVDTHEYVNSPLMAPPGVKTH
NNHTPSIYPSFPKTGCSHPPGKLHDRNCACSMSDLDMERPRTYENTMDASFKSFRTYTPK
RPAKTVHFSQDGLDSRQTLPSSASSRSREPRFQPQFQSSRPRSNPAQPANAVCEYVNMGG
NGGGRDSGGGSGSLGGSPSSEGGSRVYGDLGFYGGGRRELTGDSLNDSADTADEGNTTTT
SGSYTIDQEDNMQDLQSDIFV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgctgttgagtgtcttgccattgtaccacgctcagaacaaggagctgagttac
agtatgtacgaagagggacctgtgccttccctggtggggaacatatcgagggactccaat
gtttcacagctcctaggcaccgatgtcttcgcgactctcaggtatcgcgtgttgtcgcag
ccagacacgaacagcgcgctattctctgtgggcaacaccaccggacttctgatgaccgcc
gccaggattgatcgcgagagtctctgtcacttctcggaaaactgtcgcctcctggtctac
gtagccatccaacagagcgccggagcctactttgtcacggtcaaggtcaacgtcaacatc
cgggacattaacgacaacgacccccagttcccgcagaactcgatgtctgttcccgtgaca
gagaactccggcagagaaagcatcgacatcatccctgccatggacttggacatcgggaaa
aacaccattcaaaccttcgacgtggtggccgaagaccctaccatgttcaggctggaagtg
acaccgaacctcgacggaagtctcgtgccgaatctcgtggtcttacgggagttggaccga
gaggaacgagacttctacaaggtggtgattttggccaaagatggcggctcccccatgagg
actggcgttctgacgctgaacattacggtggaggatgtgaacgataatccgcccgagttc
acggcgaacgagtacaatgtgaatgtgaatgaaacgttgccacgggatactgtggtggcc
actgttcgagctacggatcgagacattggattcaacggagaggtacggtaccgcttcagc
cctcgtcagacggacgacaacgctaacgccttcaccatccacgacacgacgggcgagatt
cgaaccgtgcaggatttgacccaccttcagggcaaaacgctgcggcttgtggtagaggcg
gtggaccgaggaaccaagcccctgaaagctcaggccgtcgtcaatgtcaagatcatcgat
gcggtcaacaactaccccaacattcgactgaccaccatctctggagggaacgtttctctg
gtcaaggagagcgccccgactggatacgtcgtggcgcacttcattgtcgtggacaccgac
tcagggaccaacgggatcgtgagctgctccgtcagcggaggcaacttcgccctgcagaaa
ctcgtcgacaaggagtacaagatcaccctggtgggcaccctcaacagggagcagcgggac
cgctttgacgtcaacgtcaggtgctgggacttcgggaggccgtcatcgctgacgtcatca
gtgtccttcagcgtgatcgtggaggacgtcaacgacaactcgcccatcttctcgcggaag
ctgtaccggcggaacgtgacggaggagcaggggcccggggtgctgatgagggtccacgcg
gtggacgccgacatgggggagaacgggagggtcacgtatcgtctcggcaacatctcctcc
ttcatgacgtcactcatccaggttgtggagaacggagacatcgtggccagggcatcgttt
gaccgggaggtgtacaaggtcctggacttcatcgtagtggccgaggaccacggggttccc
cagaactcggccactgccagggtcatctttgacatagtggacatcaatgaccgcaagccc
tcgcttcctgtcggatacactattaaggtggcggagaaccagcccagggacacggtggtg
ggcaccatcaaggctatcgacgaggatgaaggcgacagcggcaagatcgcctaccacctg
ctgtcggacaacaacgccacccgcttcttcacggtggagaagagcggcatcgtccggacc
aaggtcaagttcgaccgagagacccgcgagttctaccacctctctgtcctcgccaacgac
cagggagaccctccaaacaccaacatcctcagcgtcactgtggagatcaccgacgagaac
gacaacaccccgcggttcttgaggcccaacgacaccttcagcgtcgtcaacatctcctct
gtcactcccgctcgtgcggtcatcttcctggctaaagtcgaggataaggacgctggcaac
aacgccgtggtggacttcgggttcgcctcggacaactacggggcgtttactatcaatagg
actacaggagccgtgtccacgatccggaacctccagccgatggactcgggcacgtacagg
ctggtgctgctggctagagaccgcggtgtcggaggagccagatctgcgattgcaactctc
tctgttgtggtagtggctgagaacgctacgatgctcgcctcggggcaggagattgaagac
catgtcatcatcgtcgtcgtcctcgtctgcctgactgtcctcactaccgcctgtgtcgtc
gccatcctcctccgcctgcgtcacacggatcgtcgcgagcgtcgtcaccaccaccaccac
caccacggccttcctcccgagtccaaagccgcctaccaccttcgtgaagtcaaaggctcc
ggatccagccttagcggcggaggcagtaacggaggcggtggtggaggagggggaggagga
ggaggtgggggaggagttgggcgtggaggtggtggtaatgggggtgtgggcaatgctatg
gggaaggacaagggttcgtggggtggatacgatgcggtgaaaggtcacggggtggaggag
acgggtacccccgagctggggcgagagtcggacgatgacctcatcctcttcaagctgcag
ctggcggagcagtacaaggagaaggacatgtactccaactctaagaacggcaaggcatcc
cacctggacaagcctcagacggacgagatgatgagcagttcttcacgggagaccaacggt
accgacagtggcaggggatgtagcgaggatgacagtcaggctgtagaatccatccggtct
gaagcagagtcaggcttcgccagtttcctagccatgcctctcaaggacggatggcgacac
gtggacacccacgagtacgtcaactctccgctgatggctccaccaggcgtcaagacccac
aacaaccacacaccctccatctacccaagctttcccaaaaccgggtgcagccacccgccg
gggaagctgcacgacaggaactgcgcgtgcagcatgagcgaccttgacatggagcggccg
aggacctacgagaacaccatggacgcctccttcaagtcgttcaggacctacacgcccaag
aggcctgccaagaccgtgcacttcagccaagacggactagactccagacagactttgcct
tcgtctgcgtcttctaggtccagggagccgcgcttccaaccccaattccagtcctcccgg
cccagatccaaccctgctcagcctgccaatgctgtctgcgagtacgtcaacatgggcgga
aacggtggcggaagggatagcggaggcggcagtggtagcctaggcggctctccgtcttcg
gaaggcggctcgcgggtttacggggacttggggttttacggaggggggcggagggagctg
acgggagacagtctgaacgacagtgcggacacggctgatgaaggcaacaccaccaccacg
tcgggcagttacaccattgaccaggaggataacatgcaagacctgcagagcgatatattc
gtctga
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