Littorina saxatilis: 138973656
Help
Entry
138973656 CDS
T10665
Name
(RefSeq) interference hedgehog-like isoform X1
KO
K20245
brother of ihog
Organism
lsax Littorina saxatilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_5
Fn3_VIN3
C2-set_3
EphA2_TM
C2-set_2
SIT
TM_ErbB1
Fn3_SaeA_3rd
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
138973656
NCBI-ProteinID:
XP_070202485
LinkDB
All DBs
Position
LG8:<46028462..46048161
Genome browser
AA seq
1204 aa
AA seq
DB search
MTSLLSVTKTMRGAAATTTHHSPTYHHQRRYDNNCCCWSVRSTTTAVVVAVFSLLADRSC
FVALLVLASVAGFVRGDELPRFSQEPQSAVIAHHQPLTLHCRVEPPETRVRWLFNGETLD
PGSHPGLERVGSDLKFARFRHGGEGEGPGNDGEYRCTATTDVGTIVSRPAVVSKPVLSPF
RHSDDLVIEAYEGGYVTIPCTAPHSIPPANIQVLTPTGLLISRSQGRVDQLPSGSIVMKD
LLPGDSGNYTCLAFNPVSGRNRSAPYSVRLTVIPKSQGVGGERTEIVDQSTEELKVTRGD
SVLLECPVAGVGQISVEWKRAYASLPQGHTEDKFGNLRITQVELVNSGTYICETPSGQKR
QVELEVQMPPAVSSEPPDGAVVAEVGGAVRLMCRGGAFPAPSVTWYHNGQKIGRANVNNA
GGEEHPHRLQQVRMEDAGLYVCELSNDLGHASAVLHLVVHQPDSPDANTPADESHVDDAP
GEITPADDDDDDAVESKRKFHLTVRTNNKNRNGRKKKKNGKKKKKKNRKKSRAKKEKLVP
PSSPTVTRQSDQSVLVEWTVPQNDGLPIDLFRVQYKEVKPKNGPWQTMDEDIGANARQYK
VKKLKPGGTYKFRIAAVYSNHDNRNSPNSRRFHLRPPLSPIPRSPDHIPKIVEAKPIIHE
GNHAIGIKWHFPPKEEYTIKGFYIFYKPYDSIDDYKRKELESAVTRKFLLKDLEPDTEYQ
ISMKSFNDAGTSEFSNTVVKRTQPREGQKPTAAPTILPPPPGTDEETDTPRPRPEPGGLD
QPVILGIVLGIMLLLLVVFIAMCWWKQRQQKRHNQNTESGSKFQDQAHRIYTDSLRKKHP
NGGPYPLNGMNGLALTNGHGPPHGHGPPGHRMNIDINPLANMEHGGHHRSQPPPLGQREM
YSGKPYHHGNGIIPNGTLPGYGHGHTSDNNFNNIRHTVSTDDVIGTGMIPNGVNCMGPGV
GTGGGYSSRPYPPSSHSRTSLSSFTHNPPPHHPHHRRRGGSLSQSDEQDSPDETEPLARE
SPRYARDSPSYSSSGRGHNMRHNSRDNVRDGLYERRPCYGYEGTYDSGSGYRVGGEEGVP
GYHPWVPGVGSGTGPSPCPSSSSHTGKHKRRRKRPHSERDREHATKDQATNTDLSSNGEE
GTIEFGMLNKSPTSSLSNGSDNSMGSNTTGSNSMDVKTRTANGTPGVSMLHAPPPVVVLP
VRSL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactcctctcggtcaccaagaccatgcggggcgctgccgcaaccacaacccac
catagtccaacctatcaccaccagcgacgctacgacaacaactgctgctgttggtctgtg
aggtctactactactgctgttgttgttgctgtcttcagtctccttgcggaccgttcctgc
ttcgttgcgctgctggttctggcgtctgttgcgggcttcgtgcgtggagatgagctaccc
cgcttcagccaggagccccagtcagccgtcatagcgcaccatcaacccctcacactccac
tgtcgggtggagccccctgaaacccgggtgcgatggctcttcaacggggaaaccctggac
ccgggctcccacccgggcttggagagggtgggcagcgacctgaaatttgctcgcttccgt
cacggaggggagggggagggtcctggcaacgacggggaatacaggtgcacggccaccact
gatgttggtaccatcgtcagcaggcctgccgtggtgtccaaaccagtgctgagtccgttt
cgccacagtgacgacctcgtgatcgaggcgtatgagggtggttacgtcaccatcccctgc
accgccccccacagcattccccccgccaacatacaggtgctaacacccaccggtctcctc
atctcgcgctcacaaggtcgagtagaccaactaccatcgggaagcattgtgatgaaagac
ctgctgcccggtgattcagggaactacacgtgtttggcctttaaccccgtgtccggtcgc
aatcgctccgccccttacagcgttcgtctcaccgtcattcccaagtcacaaggtgtggga
ggagagaggacggagatcgttgaccagagcacggaagagctgaaagtgaccaggggggac
tctgtgctgctggagtgcccagtggccggagtgggtcaaatctccgtcgagtggaagaga
gcctacgccagtctgccgcaggggcacaccgaagataagttcggcaatctccgcatcacc
caagtggagctagtcaacagtggaacctacatctgcgagacgccctccggccagaagcga
caagtcgaactggaggtccagatgcctccagcggtctccagcgagcctccagacggagca
gtggtggcggaggtgggcggggctgtcagactgatgtgcaggggcggagcttttcccgcc
ccttccgtcacgtggtaccacaacgggcagaagattggccgggccaacgtcaacaacgca
gggggcgaggagcacccacatcgcctgcagcaggtcaggatggaggacgcggggctctac
gtgtgtgaactgtccaatgatctgggccacgccagcgctgtcctgcatttggtggtccat
caacctgatagtcctgacgccaacactcctgcagatgagagtcacgtggacgatgcccca
ggggagatcactccagcggacgacgatgacgatgacgcagttgaaagcaagcgcaagttt
cacctgactgtccgcaccaacaacaaaaacaggaacggccgcaaaaagaagaagaacggc
aagaaaaagaagaaaaagaacagaaagaagagcagggcgaagaaagagaagctggtccca
ccctcctcgcccacagtgacgcgtcagtctgaccagtccgtgctggtggagtggacagta
ccccagaacgacgggctgcccatcgacctgttccgtgtccagtacaaggaggtcaagccc
aagaacggaccgtggcagacgatggacgaggacatcggggccaacgcgcggcagtacaaa
gtgaagaagctcaagccaggtgggacctacaagttccgcatcgcagcagtgtactcgaac
cacgacaacaggaacagccccaactcgcgccgcttccacctgaggccccctctgtccccc
ataccgcgctcaccggaccacatccccaagatcgtggaggccaagcccatcatccatgaa
ggcaaccacgccatcggcatcaagtggcattttccgcccaaagaggaatacaccatcaag
gggttctacattttctacaagccctacgattccatagatgactacaaacgcaaggaactg
gagagcgcggtgaccaggaagttcctactgaaagacctggagccggacaccgagtaccag
atctccatgaagagcttcaacgacgctggcacttcagaattcagcaatactgtcgtcaag
cgaacacaaccgcgagagggccagaagccgacggctgcaccgaccatcctgccacctcct
ccagggacagacgaagagacggacacgcctcgacccaggccggagccaggaggccttgac
cagccggtcatcctgggcatcgtgcttggcatcatgctgctcttgctggtcgtcttcatc
gccatgtgctggtggaaacagcgccagcagaaacgacacaaccagaacacggagagcggc
tccaagtttcaggaccaggcccaccggatctacacggacagccttcgcaagaagcacccc
aacggcggcccctacccgctcaacggcatgaacggcctggcgctgaccaacggtcacggc
cctccgcacggccacggccctcctggacacaggatgaacatcgacatcaaccctctggcc
aacatggagcacggaggtcaccaccggtctcagcccccgcctcttggacagagggagatg
tactccgggaaaccctaccaccatggtaacgggattattcccaacggaacgttaccaggc
tacggtcacggccacaccagtgacaacaacttcaacaacatccgtcacacggtcagcacc
gacgacgtcataggaacagggatgatacccaacggcgtcaactgcatgggacccggggtg
ggaacaggaggagggtacagctcgagaccctacccaccctcctcccactcgagaacctcc
ctctcctccttcacccacaaccccccaccccaccatccccaccaccggcggcgcggcggg
tccttgtcgcagtcagacgagcaagactctccggatgagacagaacctctggcgcgagaa
agccctcgttacgcccgcgactcgccctcctactcaagctcaggccgaggtcacaacatg
cgtcacaacagcagagacaatgtgcgagacgggttgtatgagcgcaggccgtgttacggg
tacgaagggacctacgactcggggtccggctacagggtgggtggagaggagggggtgccc
gggtaccacccctgggtgccgggggtggggtcgggaacaggcccctccccttgcccctcc
tcctcgtcacacacgggcaagcacaagcggcggcggaaacgtccgcacagcgagcgggac
agggagcacgccacgaaggaccaggccaccaacacggacctcagtagtaacggtgaggag
ggcacgatagagttcggcatgctgaacaagtctcccaccagttcgctgtccaacgggtcg
gacaacagcatgggttcaaacacgacgggttcaaactccatggacgttaaaacacggaca
gctaacggcaccccgggtgtctccatgttgcacgcccctccccccgtggtcgtgctaccc
gttaggtccttgtga
DBGET
integrated database retrieval system
