Littorina saxatilis: 138974774
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Entry
138974774 CDS
T10665
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
lsax Littorina saxatilis
Pathway
lsax04137
Mitophagy - animal
lsax04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
lsax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
138974774
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138974774
Multi subunit type E3
ERAD complex
138974774
LMBR1L-GP78-UBAC2 complex
138974774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138974774
NCBI-ProteinID:
XP_070203605
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All DBs
Position
LG1:complement(56222519..56238454)
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AA seq
719 aa
AA seq
DB search
MPAVLLERLPLPSLQTYVTLSVIFLASSLLYTHHTVITGQTAVTLQDAVVTTTQIEEQSS
SLRGWIPEPEIKEPVAGEDADIYESLGIQEPINMTLPYDNYQENFLWVLFTEAWCVWTIV
NTVYCLLILLGKLIQALIFGELRVSEQQHLKDKFWNFVFYKFIFIFGVMNVQTMEEVVLW
VAWFTCLGFLHLLVQLCKDRFEYLSFSPTTPRSAHAKLLGLLLVLMGCSATLLGVCVAAG
FKFGLTIFAFMAAECVLLGLKTVYVIVRYLIHLWDLSLESVWENRSVYVYYSELIFELSS
LSVDFGHHLHMLLWGNIFLSMASLVICMQLRYLFYEFQRRIKRHKNYRQVVKNMQARFPM
ATQEDLELNADECAICWESMEAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMTLSERTGD
QNPRADRTEAAGATNVNLAEAAAAANQGTTNHFFHFDGSRYVSWLPSFSVEVTHTSLMPG
QQLRIQTSQLDSMLRQVQMMFPNFPSQVILDDLRQTRSVEVTIDNILENRLQPSRTIDLA
AYREDYWENNPNSPHPQQQQEPQSQQEVTRLPTEASHGTDQMAPQAATDSNNFEVREPTE
GSQLSDAVSSFTTTSQPFQSQQLVPVEEASPSRDGAVGGEHQIQAQGGRFSKSASERMSM
LEQRKNALLEQARRRYLARHSEAGGDGPSSAAGHQSSDDDRVRRREVVLQATQRRLNNS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggttttgctggaaaggctgcctctgcccagcctgcaaacttatgtcactctt
tctgtcattttcctggcatcttccttactttacacacaccacacagtcatcactggtcag
acagctgttaccctgcaagatgctgtggtcaccacaacacagatagaagaacagtcctca
agtttaagaggctggataccagagccggagatcaaggaaccagttgccggagaagatgcg
gatatctatgaatctctgggtattcaggaacctatcaacatgacacttccctatgacaac
taccaggagaacttcctctgggttctctttacagaagcctggtgtgtttggaccatagtc
aacactgtttactgtctgctgattttgctgggcaaactgatccaggctctcatttttggg
gaactgagagttagtgaacaacagcatctgaaggacaagttctggaactttgtgttctac
aagttcatcttcatctttggagtgatgaatgttcagaccatggaggaggtggtgctgtgg
gtggcatggttcacctgcctcggtttcttgcacctcctggtgcagctgtgcaaggaccgc
tttgaatatttatcattttccccgacaactccacgctccgcccatgccaagctgttgggc
ctgctgctggtgttgatgggttgttcagccactctgctaggggtctgcgtggctgctgga
ttcaagtttggactgaccatctttgccttcatggctgctgagtgtgttttgctgggtcta
aaaacggtctacgtaatagtcaggtaccttatccacctgtgggacctgagcctggagagt
gtgtgggaaaaccgctctgtgtacgtctactactccgagctgatcttcgagttgtcctct
ctctccgttgactttggtcaccacctccacatgctgctgtggggcaacatcttcctgagc
atggccagcctggtgatttgcatgcagctgcgttacctgttctacgagttccagcgtcgc
atcaagcgccacaagaactatcgccaggtggtcaagaacatgcaggccaggtttccaatg
gcaacacaagaagacctggaactgaatgcagatgaatgtgccatttgctgggagagcatg
gaggctgctcgcaaactgccctgtggtcatctcttccacaactcttgcctgaggtcatgg
ctggaacaggacacatcctgcccgacctgtcgcatgaccctgagcgagcgcactggtgac
cagaacccgcgcgctgatcgtactgaggctgctggtgccactaatgtcaacctggcagaa
gccgcagctgccgctaaccagggcacgaccaaccacttctttcattttgatgggtcacgc
tacgtcagctggcttccaagtttttcagtggaagtgacacataccagcttgatgccaggg
caacagctccgtatccagacctctcagttggacagcatgctgcgtcaggtgcagatgatg
ttccccaacttcccatcccaggtaatactggatgacctgcgacagacacgctccgtggag
gtcaccatcgacaacatcctggagaacaggctgcaaccgtcgaggacaatagacctggca
gcatacagggaagactactgggagaacaatccgaactcacctcatccacagcaacaacag
gaaccacagtcgcagcaggaagtgacacggctgcccacagaagcgtcacacggtacagac
cagatggctcctcaagctgctacagactcaaataactttgaggtcagggagccaacagaa
ggctcacaactttcagatgctgtttcttcttttaccacaacttcacagccgttccagtct
caacagttggtgcctgtggaagaagcatctccaagccgtgacggagcagtgggaggagag
caccagattcaggcccaaggcgggcgattttccaagtctgcgtcagagcgcatgtccatg
cttgaacagaggaagaacgccttgttggaacaggctcgcaggagatacttggctcgccat
tcagaggctggaggagatggtccatcatctgcagctggccaccagagttcagatgatgac
agggtacgcagacgcgaagtggtcttgcaagctacgcagaggcgtcttaataactcatag
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