Littorina saxatilis: 138975217
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Entry
138975217 CDS
T10665
Name
(RefSeq) ubiquitin-protein ligase E3B-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lsax Littorina saxatilis
Pathway
lsax04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138975217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsax04121
]
138975217
Enzymes [BR:
lsax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
138975217
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
HECT type E3
138975217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Nexin_C
Motif
Other DBs
NCBI-GeneID:
138975217
NCBI-ProteinID:
XP_070203968
LinkDB
All DBs
Position
LG9:complement(8687295..8733478)
Genome browser
AA seq
1092 aa
AA seq
DB search
MFSRVDPAKEKVQFLEQAKALREERAGKIQREHAVITIQALCRGFLDRTRLKRQIRGEID
KVLHMPEGDGEEYKPTLIPATELFAVTSRFLVVMNEKQDAKRFQYLCRFILASMDCENIK
TCYASLAMTKTHVLAWIRQLKDVLWLCCSSLKTLRPENHADLKSITVHLRMLVTFTSTTN
WTTLRLKAGEQFLVGLTQVCNNVMGHLNTRGLYPVLETLLTKGLVRSKPVFSKATLTAIL
TIAIRPLLGANFSENLLNVFLLHILSVPALVQHMSNIAPECTELLVTHRVFRRCLELLTC
EQSTRIIFNTLEGNYALCLMANLIQLGYKELEGLVENTTDFMTVMIRLLEKCKAYVQNKR
SNLTHWHPVLGWFSQRTNQRLHEAMPFVVLQLQLLWSERMIRLLFTALLEYVQLNTAPSG
NKASSPSKKHEWVNPFHSSPCRNILKKALEKASSKSSGPKIKVESSISMQTCLPCALYRT
TLHTLTELRMDILGGLSYTETLLPILWRFLCDLGPSCGLKTFLELLAQAPNSTIHPIFSL
LTLFCETASHLITTLDDMEMYEQQQIFSMHDYLKMSEFLNFFVVRVIWNSLIDIQVAPSS
DVFNSALTLLIILHERDARRSFAPLEHWLVRDVKPSHFAAVCSRDVKPSHFVSELEHGKK
AAQFLMQHVPHIIPFGERVMLFRKNVMKEKEALGLTESVCVSPQSTLITVHRSRIVEDGY
RQLATLPPRALKGVIRVKFINEQGLDEAGIDQDGVFKEFLEETITKVFDPGLNLFKVTSE
QKLYPSSTSYIQENHLALFEFVGKMLGKAVYEGIVVDVPFAPFFLTQMLGHQQSSTYSSL
DELPSLDADLAKSLCYIKHYEGDVGDLELTFSCDEDCMGKLETHELVTGGRAIPVTNENK
IRYVHLMAHFRMFRQIKDQALAFIRGFKAVVHPDWLCMFSAPELQKLTSGDSSALDIEDL
RRHTQYYGGYHNNHKVINWLWDVLNGDFTHDERSLFLKFVTSCSKPPLLGFAHLEPPFSI
RCVEVSDDQDTGDTVGSVLKGFFNIKKKEAGGRLPTSSTCFNLLKLPNYSKKSVLRDKLR
YALHSHSGFEIS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcgtgtggaccccgcgaaggagaaggttcagttcttggagcaggccaaggcg
ctgagggaggagagagcagggaagatacaacgtgaacatgcagtcatcacaattcaggcc
ttgtgtcgaggatttctggacagaaccagactgaaacgtcagatcagaggggaaatagac
aaggtgctgcacatgcctgaaggggatggggaggagtacaaacctaccttgatacctgcg
acggagttgtttgctgtcaccagcaggttcctggttgtcatgaatgagaagcaagacgct
aagaggttccagtacctatgcagattcatactggcttcaatggactgtgaaaacatcaag
acgtgttacgcatcactggcgatgaccaagacccacgtgctggcctggatcagacagctg
aaggacgtactgtggttgtgctgctccagtctcaagacactcaggcctgaaaaccatgcc
gatctcaagtccatcacagtacacctacgcatgttggtcactttcaccagcaccacaaac
tggacgactctcaggttgaaagcaggtgagcagtttcttgtgggcctgacacaggtgtgt
aacaacgtgatgggacacctcaacaccaggggactgtacccagtgctggagactctgctg
accaagggactggtgcggtccaagccagtgttcagcaaggccacactgaccgctatcctg
accatcgctatcagacctttgctgggtgccaacttctctgagaacttgctgaacgtgttt
ctgctgcacattctgtccgtgccggcccttgttcagcacatgtccaacattgcgccagag
tgcacagagctgctggtgacgcaccgagtgttccgtcgctgtcttgagctgttgacctgc
gagcagagcactcgcatcatcttcaacacactggagggaaactatgctctctgtctaatg
gcaaatctcattcagttaggatacaaagaattagagggtttggttgaaaacacaacagat
tttatgactgtgatgatccgactgctggagaaatgcaaggcgtacgttcagaacaaacgc
tccaacctgactcactggcaccctgtgctgggatggttctcacagcgaacaaaccagagg
ttgcacgaggcgatgccgttcgtggtcctgcaactgcagctgctgtggagcgagcgcatg
attcggttgctgttcaccgccctgctggagtacgttcagctcaacacagcgccctctggc
aacaaggcgtcgtctccgtccaaaaaacatgaatgggtgaatccctttcacagctccccc
tgtcgcaacatcctgaagaaggccctggagaaggcttcgagtaagagcagtgggcccaag
atcaaggttgagagttctatttccatgcagacctgtctgccctgcgccctctacagaacc
acgctgcacacactcactgagctccgcatggacattctcggcggtctgagctacacggag
acgctgttgccgatcctgtggcgcttcctgtgcgacctggggccgagctgcggcctcaag
acattcctggagctcctggcacaggcacccaactccaccatccaccccatcttctccctc
ctcaccctcttctgtgagactgccagccacctcatcaccactctggacgacatggagatg
tacgagcagcagcagatcttctccatgcacgactacctcaagatgagcgagttcctcaac
ttcttcgtcgtcagggtcatctggaactctctcattgacatccaggtggctccaagcagc
gatgtctttaattcagccttgaccttgctgatcattctccacgagcgtgacgcccgacgc
agcttcgctccccttgaacactggctagtcagagatgtgaagccgtctcattttgctgct
gtttgttccagagatgtgaagccgtctcattttgtgagcgagttggagcacgggaagaag
gcagcgcagttcttgatgcagcatgttccacacatcattccatttggcgagagggtaatg
ctgttccgcaagaatgtgatgaaggaaaaagaggcgctgggcctgacggagtctgtctgt
gtctccccccagtccacgctcatcaccgtgcaccgcagtcgcatcgtggaggacgggtat
cgtcagctggccacgctgccgccaagggcactgaagggagttatacgcgttaagttcatc
aatgaacagggtctggacgaggctggcattgaccaggacggcgtcttcaaggaattccta
gaggagaccatcaccaaagtcttcgaccctgggcttaacctattcaaggtgacgtcggag
cagaagctgtacccatcctccacgtcctacatccaggagaaccacctggcgctcttcgag
ttcgtcggcaagatgctgggcaaggccgtctatgagggcatagtggtggacgttcccttc
gctccgttcttcctgacacagatgttgggtcaccagcagtcctccacctacagttctttg
gatgagctgccgtccctagacgctgacctggccaagagtctctgctatatcaagcattac
gagggagacgtaggtgaccttgagctgaccttctcctgtgacgaggactgcatgggcaag
ctggagacacacgagctggtcactggaggtcgcgccatccccgtcaccaatgagaataag
atccgctacgtgcacctgatggctcacttccgcatgttccgtcaaatcaaggaccaggcg
ctggccttcatccgaggcttcaaggccgtggtgcaccccgactggctctgcatgttctct
gccccggagctgcagaaactcacctcgggcgacagcagtgctctcgacatcgaggacctc
aggcgacacacacagtactacggcggttaccataacaaccacaaggtgattaactggctg
tgggacgtgctcaacggcgacttcacgcatgacgaacgcagtctcttcctcaagtttgtg
acgagttgttcgaagcctcccttactgggctttgctcacctggagccccccttctccatc
cgctgtgtggaggtcagcgacgaccaggacacgggcgacacagtggggtcagtgctgaaa
ggatttttcaacatcaagaagaaggaggcgggcgggcggttgccgacatcctctacttgc
ttcaatctcctcaagctgcccaactactccaagaagtctgtgctgcgcgacaaactccgc
tacgccctccactcccattccggcttcgagatctcgtga
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integrated database retrieval system
