Littorina saxatilis: 138975601
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Entry
138975601 CDS
T10665
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138975601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138975601
Spliceosome [BR:
lsax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138975601
Complex C
U5 SnRNP specific factors
138975601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
138975601
NCBI-ProteinID:
XP_070204419
LinkDB
All DBs
Position
LG9:22219057..22262189
Genome browser
AA seq
2371 aa
AA seq
DB search
MAFPYTVIGPGGQPYIVGQIPMMQQAMAPQLIQQVPMQVAPQPMPQQVQVPQPQVPKQPD
YMSEDKLQEKARKWQQLQSKRYSEKRKFGFIDAQKEDMPPEHVRKIIRDHGDMTNRKFRH
DKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFINEIPWVVEPIYISQ
WGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNIMDVEPLEAIQMEMDPEEDKAV
LEWYYDHKPLIDTKLVNGSTYRRWQLTLPILSVLYRLANQLLTDLVDTNYFYLFDLKSFF
TAKALNLAIPGGPKFEPLVKDKEMHDEDWNEFNDINKIIIRQPVRTEYRIAFPYLYNNIP
FKVHLSWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRTAVKTAEPVVDDDEDFELPEHV
QPFLCDTPLYSDNTANGIALIWAPRPFNLRSGRTRRAIDVPLVKSWYREHVPAGMPVKVR
VSYQKLLKYYVLNALKHKPPKAQKKRYLFRSFKATKFFQTTELDWVEVGLQVCRQGYNML
NLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQY
RLGNIDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKG
PGCGIWAPGWRVWMFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLE
LRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVK
AKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAE
EAVAIYTTMVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREEL
GLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQ
YLWYEADKRRLFPPWIKPSDSEPPPLLTYKWCQGINNLQDVWDTAEGECNVMMESTFEKM
YEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQFY
GLVLDLLVLGLHRASEMSGPPQMPNDFLTFQDTVTEAAHPIRLYSRYIDRIHIFFRFSAE
EARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIQNRLPRS
VTTIQWESSFVSVYSKDNPNLLFNMCGFECRVLPKCRTTHEEFTHRDGVWNLQNEVTKER
TAQCFLRVDEESMSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRESVVNTQEL
LDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSK
QTDVGITHFRSGMSHDEDQLIPNLYRYILPWESEFIDSQRVWAEYALKRQEANAQNRRLT
LEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKL
WNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWERASGFEESMKYKKLTNAQRS
GLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQK
IHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWNVSRPSL
LADSKDTMDGATTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIA
IDLAYNLHSAYGNWFPGAKPLIQQSMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLS
SQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHT
SVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVI
KGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALH
VNNDKTKILLKPDKTTVTEAHHIWPTLTDEEWMKIEVQLKDLILADYGKKNNVNVASLTQ
SEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTITVNKHGDEIITSTTSNYET
QTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFIIISDLRAQI
SGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTVHLPNILPEHEYLKEMEPLGWIHTQPNE
LPQLSPQDISTHARVMSDNPTWDGEKTVVITCSFTPGSCSLTAYKLTPSGYEWGRQNKDT
GNNPKGYLPSHYERVQMLLSDRFLGFFMVPNQGSWNYNFMGVRHDPSMRYELVLSNPKEF
YHEVHRPTHFQIFANTDDSNQIGADREDLFA
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggccttcccgtacacagtgataggccctgggggccagccctacatcgtagggcagatt
ccgatgatgcagcaagcaatggcgccacaactaattcagcaagtgccaatgcaagtggcc
cctcaaccaatgccacagcaggtgcaggtgccacagccacaagtaccgaaacagcccgac
tacatgtctgaagacaaactgcaggaaaaggctcgaaaatggcaacagctgcagtcaaag
cgctattcagagaagcgcaagtttgggtttatagacgctcagaaagaagacatgcctcca
gagcacgtgcgaaagatcattcgtgatcacggagacatgaccaaccgcaagttccgtcat
gacaagcgtgtgtacttgggggcgctgaagtacatgcctcacgcggtgatgaagctactg
gagaacatgcccatgccgtgggagcagatccgcgacgtcaaggtcctctaccacatcacc
ggggccatcaccttcatcaacgagatcccatgggttgtcgagcccatctacatctcacag
tgggggaccatgtggatcatgatgcgtcgtgagaagcgtgaccgtcgccacttcaagcgc
atgaggttccctccctttgacgatgaagagcctccgctggattacgctgacaacatcatg
gatgtggagcctctggaggctattcagatggagatggatccggaggaagacaaggctgtt
ctggaatggtactacgaccacaagcctctgatcgacaccaagctggtgaacgggtcgaca
taccgtcgatggcagctgaccctccccatcttgtcggtgctgtaccgactggccaatcag
ctgttaaccgacctggtggacaccaactacttttacctctttgacctcaagtccttcttc
accgctaaggccctcaacctggccatccccggcggtcccaagttcgaacccctcgtcaag
gacaaagagatgcatgacgaagattggaacgagttcaacgacatcaacaagatcatcatc
cgccagcctgtgcgcacagagtaccgcattgctttcccctacctctacaacaacatcccc
ttcaaggtgcatctctcctggtaccacacacccaacgtggtgttcatcaagacagaggac
cctgacctgccggcgttctactttgacccccttatcaacccgatctcgcaccgcacagct
gtcaagacggcagagcccgtggttgacgatgacgaggactttgagctgccagagcatgtt
cagcccttcctgtgcgacacgccgctgtacagcgacaacaccgccaacggcatcgctctc
atctgggccccacgacctttcaacctgcgctcggggcgaacacgtcgtgccattgatgta
cctctcgtcaagtcatggtacagagagcacgtcccggcgggcatgccggtcaaggtgcgt
gtgtcctaccagaagctgctcaagtactacgtcctcaacgcactcaagcacaaacctccc
aaggcacagaagaagaggtacctgttccggtcgttcaaggccaccaagtttttccagacg
acggagctagactgggtggaggtggggctgcaggtgtgtcgccagggttacaacatgctc
aacctcctcatccatcgcaagaacctcaactacctgcatctcgactacaacttcaacctc
aagcccgtcaagactctgaccaccaaggagagaaagaagtctcgcttcggcaacgccttc
cacttgtgtcgtgagattctgcgtctgaccaagctgatcatcgacagtcacgtgcagtat
cgtctgggcaacatcgatgctttccagttggcggacggcctgcaatacatcttcgcccac
gtgggtcagctgaccggcatgtaccgctacaagtacaagctgatgagacagatcaggatg
tgcaaggacctcaagcacctcatctactacaggttcaacactggaccagtgggcaaaggg
ccagggtgtgggatctgggcgccgggctggcgtgtgtggatgttctttatgcgcggcatc
acccctctgctggagcgttggctgggcaacctgctgtcccgtcagtttgaaggtcgccac
tccaagggcgttgccaagaccgtcaccaagcagcgtgtggagagtcactttgatctggag
ctgcgtgctgctgtgatgcatgacatcctggacatgatgccggagggaatcaaacagaac
aaggcgcgaaccatcctgcagcatctctccgaggcctggcgctgctggaaagcaaacatc
ccctggaaggtgcccggcctgcccacgcccatcgagaacatgatcctgcgctacgtgaag
gccaaggccgactggtggaccaacaccgctcactacaaccgtgagcgaatccgccgcggt
gccaccgtggacaaaaccgtgtgcaaaaagaacctgggtcgtctgacgcgtctctacctc
aaggctgagcaggagagacagcataactatctgaaggacggtccgtacatcacggcagag
gaggctgtggccatctacaccaccatggtgcattggctggagagtcgtcgcttctccccc
atccccttccctcccctctcctacaagcacgacaccaagctcctcatcctcgccctcgag
agactcaaggaggcatacagcgtgaagagccgactgaaccagtcacagcgagaagagctg
ggtctgatagagcaggcctacgacaacccccacgaggccctgtccaggatcaagcgtcat
ctgctcacacagcgtgccttcaaggaggtgggaattgagttcatggacctgtacagtcac
ctgatccctgtgtacgacgtggagcccctggagaagatcacagacgcctacctggaccag
tacctgtggtacgaagcagacaagcgccgtctgttcccgccctggatcaaaccctcagac
tctgaaccaccaccgctcctcacctacaagtggtgtcaaggaatcaacaacctgcaagac
gtgtgggacacggcggaaggcgagtgtaacgtgatgatggagtcgacctttgagaagatg
tacgagaagattgacttgacgctgctcaacagactgctgcgtctcattgtggatcacaac
attgctgattacatgacggccaagaacaacgtcgtcattaactacaaggacatgaaccac
accaactcatacggaatcatccgcggcctgcagttcgcgtccttcatcgtccagttctac
ggtcttgtccttgacctgctagtcctgggtctccatcgtgccagcgagatgtctggacct
ccacagatgcccaacgacttcctcaccttccaggatacagtgactgaggctgctcatcct
atccgcctgtattcacgctacatcgaccgcatccacatcttcttcaggttctcagcagaa
gaggctcgggatctgatccagcgctacctgacggagcaccccgaccccaacaacgagaac
attgtgggctacaacaacaagaagtgctggcccagggactcacgcatgcgactcatgaag
catgacgtcaacctgggtcgtgcagtgttctgggacattcagaaccgactgccgcgctcg
gtgaccaccatccagtgggagagcagcttcgtgtcggtctacagcaaggacaaccccaac
ctgctctttaacatgtgcggctttgagtgtcgtgtcctccccaagtgccgtaccacgcac
gaggagttcacgcatagggacggtgtgtggaacttgcagaatgaggtgaccaaggagagg
acagctcagtgtttcctgagagtggatgaagagtccatgagtcgtttccacaatcgtgtg
cgtcagatcctcatggcttctggctccaccactttcaccaagattgtgaacaagtggaac
acggctctgatcggcctgatgacctacttcagggagtcggtggtcaacacacaggagctg
ctggacctgctggtcaagtgtgagaacaagatccagacacgtatcaagatcggcctcaac
tccaaaatgccctccaggttccctcccgtcgtcttctacacgccaaaggagctgggaggc
ctgggaatgctgtccatgggccacgtcctcatcccgcagtcggatcttcgctggtccaag
cagacggacgtgggcatcactcacttccgctcgggcatgagtcacgacgaggaccagctc
atccccaacttgtaccgctacatcctgccctgggagagcgagttcatcgactcgcagcga
gtctgggccgagtacgctctcaagcgccaggaggccaacgctcagaacagacgcctgaca
ctggaagatctggaggacagctgggatcgcggcattcctcgtatcaacacgctcttccag
aaagacagacacactctggcctacgacaagggatggagggtgcgcacagacttcaaacag
taccaggtgctgaagcagaacccgttctggtggacccaccagcgtcacgacggcaagcta
tggaacctcaacaactaccgcacagacatgattcaggccctgggcggtgtggagggcatc
ctggaacacacactcttcaagggcacctacttccccacctgggagggtctcttctgggaa
cgagccagtgggtttgaggagtcgatgaagtacaagaagctgaccaacgcccagcgatcc
ggtttgaaccagatccccaaccgtcgcttcaccctctggtggtcacctaccatcaacaga
gcaaacgtgtacgtgggtttccaagtgcagcttgacttgacgggaatcttcatgcacggc
aagatccccaccttgaagatctccctcatccagatcttccgtgctcatttgtggcagaag
atccacgagagtgtcgtcatggatctgtgtcaggtgtttgaccaagagcttgacgccctt
gagatcgagacggttcagaaggagaccatccatccccgcaagtcctacaagatgaacagc
tcctgtgctgatgtgctgctctttgctgcttacaagtggaacgtctcacggccctcgctg
ttggctgactcaaaggacacgatggacggtgccacaacccagaagtactggatcgacgtc
cagctgagatggggcgactacgactctcacgacgtggagcgttacgctcgagccaagttc
ctggactacaccacagacaacatgagcatctacccctcgcccactggggtgctcatcgcc
attgatctggcctacaacctacacagtgcctacggcaactggttcccgggagccaagccc
ctcatccagcagtccatggccaagatcatgaaggcaaaccccgccctctacgttctgcgt
gagcgcattcgcaagggtctgcagctgtactcctccgagcccactgagccctacctcagc
tcacagaactacggagagctcttctccaaccagatcatctggttcgtggacgacaccaat
gtgtacagggtcaccattcacaagacgtttgagggcaacttgacgaccaagcctatcaac
ggagccatcttcatcttcaaccctcgcacgggacagctcttcctcaagatcatccacacc
tccgtgtgggcaggacagaaacgtctcggtcagctggccaagtggaagacggcagaagaa
gtggccgccctgattcgctcgctgccggtggaggaacagcccaagcagatcatcgtcacg
cgcaaaggcatgctggaccctctggaggtgcatctcctcgatttccccaacatcgtcatc
aagggcagcgaactgcagctccccttccaggcttgtctcaaggtggagaagtttggtgac
ctgatcctgaaagccacagagccgcagatggtgctgttcaatctgtacgacgactggctc
aagaccatctcctcatacacagcattctcccgtctgatcctgatcctgcgtgccctgcac
gtgaacaacgacaagaccaagatcctgctgaagcctgacaagacgacggtgacggaggcc
catcacatctggcccacgctgaccgacgaggagtggatgaagatcgaggtgcagctcaaa
gacctcatcctggctgactacggcaagaagaacaacgtgaacgtggcctcgctcacacag
tctgaaatccgtgacatcatcctcggtatggagatctcagcaccttccgcccagcgccag
cagatcgccgagattgaaaaacaaaccaaggaacagtcacagctgacagccaccaccacc
atcaccgtcaacaagcatggagacgagatcatcacctctaccaccagcaactacgagacg
caaacattctcttccaagacagagtggcgtgtgagagctatctcggccaccaacttacat
ctgcgaacgaaccacatctacgtgtcatctgacgacatcaaggagactgggtatacatac
atcctgcccaagaacgtgctgaagaagttcatcatcatctcagatctgagagcgcagatt
tctggctacctgtacggagtgagcccccctgacaaccctcaggtgaaggagattcgctgc
atcgtcatgccgccccagtggggaacgcaccagactgtgcacctccccaacatcctgcca
gagcacgagtatctcaaggagatggagccactgggctggatccacactcagcccaacgag
ttgccgcagttgtctccccaggacatcagcacacacgctcgcgtcatgtctgacaatccc
acgtgggacggagagaagacggtcgtcatcacttgcagcttcacccctggctcctgctcg
ctgacagcctacaagctgacccctagtggctacgagtggggtcgtcagaacaaggacaca
ggcaacaaccccaagggttacctcccctcgcactatgaacgcgtgcagatgttgctgtca
gacaggttcctcggtttcttcatggtgccaaaccagggatcctggaactacaacttcatg
ggtgttcgccacgatcccagcatgaggtatgagctggtcctgtccaatcccaaggagttc
taccacgaagtgcaccgtccaactcatttccagatcttcgcaaacaccgacgattccaat
cagatcggcgcggaccgtgaggatctgttcgcctag
DBGET
integrated database retrieval system
