Littorina saxatilis: 138975692
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Entry
138975692 CDS
T10665
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138975692
03036 Chromosome and associated proteins [BR:
lsax03036
]
138975692
Spliceosome [BR:
lsax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138975692
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
138975692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_11
Lsm_interact
PRP6_TPR
RRM_occluded
HAT_Syf1_M
LSM_int_assoc
RRM_Rrp7
RRM_ACIN1
DUF8400
Motif
Other DBs
NCBI-GeneID:
138975692
NCBI-ProteinID:
XP_070204534
LinkDB
All DBs
Position
LG9:complement(25465315..25516634)
Genome browser
AA seq
911 aa
AA seq
DB search
MAENMEKEENQPMPSEISDEEGTNDGSDESDSDDTTEQDEARIRELEKEISKNPYLYSSH
VELIKKLRELGDLDRLRDARHNMQKHFPLSEEIWLEWLRDEVPLASEQEERDKVETLFNL
AVKDYVSVPVWLEFVQFAIGGMGGEGGVQHVRDVFERAVTAVGLHVTQGANVWEAYREFE
NALLAGLMPQPGAVTTKEQEEAFSAQNQRIASLFKRQLAVPLMDMEETFAEHKEWVGGTV
NPGVQKVYGKALDTLKKVKPFEAALLAAEAPRLAEYQKYLEFEMSEGDPARIQCLFERAL
LENCLVPELWIQYTKYLDEKLKIGSMSMAAYERAMRNSPWSGTLWRNYILTLERNSQPFE
TIKGTMDKALAAGLTDSSDYLLVWTVYCDYLRRRIDWNKDHETELETYRLTVERAADHLF
NFFGLEGDPEASLRQFWADIEARHCKNLERARELWNQVMQEGYGSQAAMWLNYYRLERTF
GDVKHCRRILQRALNSVTDWLEAVTQAYLDFEREEGTLEDYEQAYSKCEAQLARVNERKA
KAADKEAAIQEQKKLQRAATKAHKKGEKTNEKEAQSAAKDANSQKNSGKWSASITGARPV
NDNSRKRKMNEERTDGFKAPHPRAFGVSAEDLQPPAKRTREEEDEHGRSVQHDASKDNVT
AFVSNLAFQMSEDRVKEFFDKCGEVVEVRLVKNFKGMSKGYGYVEFTDANEVLLALKLDR
QPIDGRPVFVSRCEDRNSGSKTHQFKYATSLEKNKLFIKNLPFTCSVEALEKIFGEHGKL
KEARLVTYRSGAPKGLAYVEYETEEEASQAVLKTDGLEIGDHKIEVAISNPPQRKQPLNS
LVPSLGGGKIETETRGRARTQVALVPRAVKRPGAAPSKPSATAASNPAQKSGDATTTEKM
SNEDFRKMLLK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacatggaaaaagaggaaaatcaacccatgccgagcgaaattagtgacgaa
gaaggcacgaacgatggttcagacgagtctgattccgatgatacaaccgaacaagatgaa
gcacgaatcagagaactagaaaaagagatttccaagaacccgtacctgtacagcagccat
gtggagctgatcaaaaagctcagggagctgggagacttggaccgtttgcgggatgccaga
cacaacatgcagaaacactttccgctcagcgaagaaatttggttggagtggctacgagat
gaggtcccgcttgcatcagagcaagaagagagagacaaagtggagactctgtttaatctg
gctgttaaggattatgtttctgtgccagtgtggctggagtttgtgcagtttgcgatcggc
ggcatggggggagagggcggtgtgcaacacgtgcgtgacgtcttcgagcgagcggtgaca
gcagtgggtctgcacgtgacccagggagccaacgtgtgggaggcgtacagagagttcgag
aacgccttgctggctggtctcatgccgcaacccggcgccgtgacaaccaaagaacaggag
gaggcgttcagcgcacaaaaccagagaattgcatcactcttcaagagacagctggcagtg
cctctcatggacatggaggagacgtttgcggaacacaaagagtgggtggggggcacagtg
aacccgggggtgcagaaggtctacgggaaagccctcgacacactcaagaaggtcaagccg
tttgaggcagcgctgttggcagccgaagcccccagacttgcagagtaccagaaatacctg
gagttcgagatgtcggagggggacccagcccgcatacagtgtctctttgaacgcgccctg
ctggagaactgtctggtgccggaactctggatccagtacacaaagtatctggatgagaaa
ctgaagatcggcagcatgtccatggcagcctacgagcgggcgatgcggaactctccatgg
agcggtacgttgtggagaaactacatcctcaccttggaacgcaactcacagccttttgag
acgatcaaaggtacaatggacaaagcgttggcggctggtttaacagactcctctgactac
ctgttggtatggactgtctactgtgactacctcaggcggcgcattgactggaataaagat
catgagacggaactggagacgtatcgcctgacagtggagagagctgctgatcacctcttt
aatttttttggattagagggagacccggaggccagcctgcggcagttctgggcggacatc
gaggcacgtcactgcaagaacttggagcgtgccagagagctgtggaaccaagtgatgcag
gaagggtacggcagtcaggccgctatgtggctcaactattacaggctggaacgaacgttt
ggtgatgtgaagcactgtcgtcgcatcttacaaagagcactgaactctgtcactgactgg
ctggaggctgtcacacaggcctacctggactttgaacgagaggaaggcacgttagaagac
tacgaacaggcctacagtaagtgtgaggcacagctggctcgggtcaacgagaggaaagca
aaggcagcagataaggaggcagccattcaggaacagaagaagttgcaaagggcagcaaca
aaggcgcacaaaaagggggagaaaactaacgagaaggaagctcagtccgcagcaaaagat
gcaaacagtcagaaaaactccgggaaatggtcggcgtctatcacaggggcgcgccctgtg
aacgacaacagtcgcaaacgcaagatgaacgaagaaaggacggatggattcaaggctcca
catccaagagcatttggagtatctgcagaagacctgcaacccccagcgaagagaacaaga
gaagaagaagacgagcatggacggtcggtgcagcacgacgcgtccaaagacaatgtcacc
gccttcgtctccaatctggccttccagatgtctgaggacagagtcaaggaattctttgac
aagtgtggggaggtggtggaggtgagactggtgaagaacttcaaggggatgtccaaaggt
tacggctacgtcgagttcaccgacgctaacgaggtgctgttagcgctgaagttagatcgg
cagcctatcgatggacgccccgtgtttgtatcacgatgtgaggacaggaattctggcagc
aaaacacaccagttcaagtacgctaccagtctggagaagaacaaactcttcatcaagaac
ctgcccttcacctgctcagtggaggctctggagaaaatatttggagagcatggcaagctg
aaggaggcgagactggtcacataccgcagtggtgcgcccaaaggcctggcctatgtggag
tatgagacagaggaggaagcttcccaggcagtcttgaagacagacggactggagatcggt
gatcacaaaatagaggttgccattagcaaccctccacagcggaaacagcctctgaattcg
ctggttccttcccttggtgggggcaagatagaaacagaaacacgtggcagggcaagaaca
caagtggccctggtgcccagagctgtgaagcgacctggtgctgcgcccagcaaaccttct
gctacagcagctagcaacccagcacagaaatccggggacgccaccaccacagaaaagatg
agcaacgaagacttcaggaaaatgctgctcaaatga
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