Littorina saxatilis: 138975979
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Entry
138975979 CDS
T10665
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lsax Littorina saxatilis
Pathway
lsax03440
Homologous recombination
lsax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138975979
03460 Fanconi anemia pathway
138975979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138975979
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138975979
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
138975979
FA (Fanconi anemia) pathway
Downstream FA components
138975979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
138975979
NCBI-ProteinID:
XP_070204862
LinkDB
All DBs
Position
LG9:37936024..37983941
Genome browser
AA seq
1762 aa
AA seq
DB search
MASHQEYKIAGHSVLFPCKPYPSQFSMMDKIIKGIQRNQNCLLESPTGSGKSLALLCSAL
AWQTAEKKKMEEEKQSVCEGNSEVCQCSCHSHKPDATPQHPPTPASATVTTATAATSSAS
TSTATAASVCEAEKAQCDALKKSVDDDASMVIDDDSDEEFKPLKKFKEPGKTNMATRKKK
VRLSIEYEDSPPTSPSLSPSTSTSSAHGVMAQRSDSDSKQSAPSPPNVSPCSHCACEKGA
QKEAPRKVPKIFFGTRTHKQVAQIVRELKKTAYHDVPMTILASREHTCIHPQVSNMGNKN
EGCENLMKDAGCRFKERVMKYQSQNAIKAMGLHSAWDLEDLVQLMKKKKACPYFLSRGLK
DQSDLIICPYNYLVDPLIRESMEINLKGQIVMLDEAHNIEDCVREAASQTITQEQIQKAL
HDMDVLIEKGVKIADISKLRQMCHKLDTFIEDQSSSLTQHDFQQSYRMWSGFEIIAQLQR
LDLGLQKYEELRTTLASIKAEEQEEKLYAGGQDVDMLSSPASSLFEQVFLVLKYLYKDDM
KHAEDYRTSIVKSVKYVNASDMNGSWLSSRRNGGRKTAVEVYSLNFWCMNPAVGFADFEA
CRSVILTSGTLSPMDSFQSELGLPFPILLEANHIIKDSQVWVGAVGEGPNREKLQAVYRN
METFDFQDGLGQLILGVCRKIPKGVLCFLPSYKTLEKLTNRWKATGVWARMEEHKRVMSE
PRGSDKMDFEQIIQGFYNTIHSCERNDGENGGVDGALFFAVCRGKVSEGMDFADNFARAV
ITVGIPYPNFKDLQVELKRKYNDKYQRSRGLLSGHLWYEIQAFRALNQALGRCIRHRKDW
GALIIVDDRFVKSTNKYANGLSKWVRQKLRVHHSCTSMLESLSDFTKTRLEAEKLDESMN
SSQIPSTPLTPASQTTTTTTALSPPTPLSTTHTTTADSRTPLHDVSNVATPSVSGTPRVT
PATVTKDDIHHGKLLFPPRNDSAETAKSDDDVIVTGVSGPGSGGKTEMSSIGTKSGIKDL
TPATNPPTLNDQDAVKLVSQASDNALNKVKKLLQTRQGQSLSSSTPVPLLPGSVAQSSMQ
PASGQTTIPSVHLPVLPGVQVSQGQGLPVLFAPAVSTGTVAGLRPTTQPSIMTAVSKLAQ
AANMAKAKPLQKKASAPALPDQALALMFGCAGVEQKMVLPTASAGKSASVSSAYPAAVAA
TGLRSPLSAGNAAQTASTSLSGEPSQMKTTSMMYLPLLDPSMKATLIKLPVASPTQTLLK
LDPQFSKAVGVEILTVPAGIRHIVMAKTLEEATNLFERTLRMNDVSPKPGAAKPAMKSLL
AGNVSAAQSGNASKPSSAAQSVNATKPSSAAQSLLASKAAAFPQGSSNAVTSARVTAAQQ
KDTSDAGSNALAKKSATVSPSVQQTKAVGQNNSQASDITTSPSLFGGSPTSQSPAGGTTS
SIKPKPSPRSTAFRIPSPSKMRTRAGTNSPASTTARKNGSPTVVSPSPDMSCGANATRKT
SDSAQECKRQVEGNLEEGGVKTLMRKRLFRNTPSKGAKPGSSSTNPGQALFSEVTSDGQI
TNAAGKASEATKARVLFAGVGHEGADTAEAEDEEKVERRVRGSKRRSLSLSESKHKKKRS
EDLLDKVGRDTTSSIKCTACGFSLLADIHESDFERRENMPTCLKGMADPSKPEVLYFKGT
TVTERFNLPDSAVGDCRKQQSSGGVEASVQLIRCPGCISDDASSSAISLLGAKVTLTDAA
AATSTGQMWIFTHMVTLTAEDK
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcatcaggaatacaagattgcaggacactctgtcctctttccctgtaaaccc
tacccttcacaattcagcatgatggataagatcatcaagggcattcagaggaatcagaac
tgtttgctggagagtccgaccggaagtggcaagtctctggctctcctctgctctgcactg
gcctggcagactgctgagaaaaaaaagatggaggaggaaaagcagagtgtctgtgagggc
aattcagaagtgtgtcagtgcagctgccacagccacaagcctgatgctaccccccagcac
ccaccaacaccagcatctgctactgtcactacagcaacagccgccacttcttcggctagc
acaagtacagcaacggccgcttccgtttgtgaagctgagaaagctcagtgtgatgctctt
aagaagtcagttgatgacgatgctagcatggttattgacgatgattctgacgaggagttc
aaaccgctgaagaaatttaaagaaccaggaaagacgaacatggcgacaagaaagaagaaa
gtcagactgtccatagagtatgaggactcccctccgacttctccctccctctccccgagt
acctctacctcatctgctcatggggtgatggcacaacggtctgactctgattccaagcag
tctgctccatctcctcccaacgtttcgccctgctcacactgtgcctgtgagaagggggcc
cagaaagaagctcctagaaaagtgcccaagatcttctttggaacgaggacacacaagcag
gtggcacagatcgtgagagagctaaagaagacagcttaccatgacgtaccaatgaccatt
ctggcaagtcgcgagcacacgtgcatacacccacaggtttctaacatgggaaacaagaac
gagggctgtgaaaacctaatgaaggacgcagggtgtcgtttcaaggaacgcgtgatgaag
taccagtcgcagaacgccatcaaagccatgggacttcacagtgcctgggatcttgaggat
ctcgtacagctgatgaaaaagaaaaaggcgtgtccttacttcctgtcacgaggcctgaag
gaccagtctgacctcatcatctgcccctacaactacctggtggacccgctcatcagagaa
agtatggagatcaacctgaagggtcagatagtgatgctggacgaagctcacaacatcgag
gactgtgtgcgagaggcagccagtcagaccatcacacaggaacagattcagaaagctctg
cacgacatggacgtcctcattgagaagggcgtgaagatagcagatatctccaagctgaga
caaatgtgtcacaagctggatacgttcatcgaagatcagtcgtcatcgttgactcagcac
gactttcagcagtcctatcgtatgtggagcggctttgagatcatcgctcagctccagcgc
ctcgacctgggactccagaaatacgaagagcttaggactaccttggcgtccatcaaagca
gaggaacaggaagaaaaactgtacgctggggggcaggatgttgacatgctgagttccccg
gcgtcttctctctttgaacaggtgtttctggtcttgaaatatctgtacaaggatgacatg
aagcacgccgaagactacaggacatcgattgtgaaaagtgtcaagtatgtgaatgcctct
gatatgaacggttcctggctaagctccaggagaaatggagggaggaagacagctgtggaa
gtgtactctctcaacttctggtgcatgaatcctgctgtgggttttgctgactttgaggct
tgccgctctgtgatcctgaccagcggcactctgtctcccatggactcgttccagtcagag
ctgggtctgcccttccccattcttctggaggcaaaccacatcatcaaggattcacaggtg
tgggtgggagcggtgggcgagggccccaacagggagaaactgcaggctgtgtatcgcaac
atggagacctttgactttcaggacgggctgggacaactcattcttggtgtttgcaggaaa
atccccaaaggggtattgtgtttcttgccgtcctacaagaccttggaaaaactgaccaac
cgatggaaggcaacgggcgtgtgggccagaatggaagaacacaagcgtgtaatgtctgag
ccacgggggtcagacaaaatggactttgaacaaatcatacaggggttctacaacaccatc
cacagttgtgagagaaatgatggggagaacggtggtgtggatggcgcactgtttttcgct
gtgtgtcggggaaaggtcagcgaaggaatggactttgccgataactttgccagagctgtc
atcactgttggcattccatatcccaacttcaaagaccttcaggtggagctgaagagaaag
tacaatgacaagtaccagagatcgcgagggttactgtcgggtcacctgtggtacgagata
caggcattccgtgctctcaaccaggcactgggccggtgcatcaggcacaggaaggactgg
ggagctctcatcattgtggacgatcgctttgtcaagagcaccaacaagtacgccaatggg
ctgtcaaagtgggtgcgtcagaagctgcgagttcatcacagctgtacctccatgctggaa
tctctgtccgacttcaccaagaccagactggaggcagagaaacttgatgaaagcatgaac
agctcacagattccatccactccattgacgcccgcatctcagaccaccaccaccaccacc
gctctgtcaccacccacaccactctccaccacccacactaccactgcagactcccgcact
cccctgcatgatgtcagcaacgtggcgacaccgtccgtcagtggcacacctcgcgtcacc
cctgccactgtcaccaaagatgacattcatcacggcaagcttttgttcccgccaaggaat
gactcagccgagacagcgaagagtgacgatgacgtgatcgtcacaggggtgtcagggccg
gggagtggcgggaaaacagagatgtcgtctatcggtacaaagtctggaatcaaggacctc
accccagctacaaacccacccacccttaatgaccaggatgcagtgaaactggtctctcaa
gcatctgataatgctttgaacaaggtgaaaaagctccttcagacgagacaaggtcagagt
ctgtcttcctctacgcccgtaccattgcttccagggtctgtcgctcagtcaagcatgcag
ccagcatcgggacaaaccaccatcccatccgtacaccttcccgttctcccgggggttcaa
gtttcccaaggtcagggtctccccgttctctttgcaccagccgtttccacgggaacagta
gcaggtcttcgacccacaacacagcctagtataatgactgccgtttcaaagcttgcacaa
gcagccaacatggcgaaagcaaaacccttgcagaagaaagcctcggctcctgctctcccc
gatcaagccttggctttaatgtttggctgtgctggtgtggagcagaagatggttttgccc
actgccagtgctgggaagtctgcttcagtatcgtctgcttatcctgctgctgttgctgcc
acaggcttgagaagtcctctgtccgctgggaatgctgcacaaactgcttccacttctctg
tcaggtgagccgtcacaaatgaagaccacaagcatgatgtatctgcccctcctggacccc
agcatgaaggccaccttgatcaaactccctgtagcgtctccgacccagactctgctcaag
ctggaccctcagttcagcaaggcagtgggtgtagaaattctgaccgttccagccggcatc
cgacacatcgtcatggccaaaaccctggaagaggccaccaacctgtttgaacgaacatta
cgtatgaacgatgtgtctccaaaacctggtgcagccaaacctgcaatgaaaagtttgctc
gcgggaaatgtgagtgcggctcagagtgggaatgcttcaaagcccagctctgctgctcag
agtgtgaatgctacaaagcccagctctgctgcacagagtttgctagcttcaaaggcagcg
gcttttccccaaggaagttccaatgcagttacatctgccagggtcaccgccgctcagcag
aaggatacgtctgatgcagggagtaacgctctggcaaagaagtcagcaactgtctctcct
tcagttcagcaaactaaagctgttggtcagaacaactcacaggcatcagacatcaccaca
tccccttccctgtttggcggctcacctacatcacagtcccctgctggtggcacaacttcc
tcgatcaaacccaagccttcccccagatcaaccgccttcagaatccccagcccgtctaaa
atgagaactcgcgccggcactaactcaccagcaagcactactgcaagaaaaaacggcagt
cctactgtggtttccccttcaccagacatgtcttgtggggcgaacgctaccaggaaaact
tctgacagtgctcaagaatgcaagagacaggtggagggaaatctggaagagggcggagta
aaaactttaatgaggaaacgactcttcagaaacacccccagcaaaggggcgaaacctgga
agcagctcaacaaaccctggtcaagcattgttctctgaagtgacgagtgacggacagatc
acaaatgctgcaggcaaagcttcagaggcgacaaaagcacgagtgctgtttgctggagtg
ggtcatgagggagctgatacagcagaagctgaagatgaggagaaagtggagagacgtgtg
cgtggctccaagcgccgttctctcagtctcagtgaaagcaagcacaagaagaagaggagt
gaggatttgctggacaaggttggaagggatacaacaagcagcataaaatgtacagcctgt
ggattctcattactggctgacatccacgaatcagacttcgagcggcgggagaacatgccg
acttgcctgaaggggatggccgaccccagcaagcctgaggtgctgtatttcaaaggtacc
actgtcacagagcgcttcaatttgcctgactctgctgtaggcgactgccgaaagcagcag
agttccgggggcgtggaggccagcgtccagctgattcgctgcccaggatgcatcagtgat
gacgcctcgtcctctgccatcagcctcctgggggcaaaggtcacgctgaccgacgctgct
gccgccacttccacaggacagatgtggatatttacacacatggtgactttgactgcagag
gacaaatga
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integrated database retrieval system
