Littorina saxatilis: 138976016
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Entry
138976016 CDS
T10665
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lsax
Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsax03021
]
138976016
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
138976016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
138976016
NCBI-ProteinID:
XP_070204905
LinkDB
All DBs
Position
LG9:38883927..38948067
Genome browser
AA seq
2167 aa
AA seq
DB search
MSHPNPTGNGCTLEDCYTNLFVLTDICGIKWRRLIVDNAAFDQLDDPVLIAYTKCIQKDI
LCVWRRVLRNSEQQLNPSDQLSYNKELWVFWYGDPPSFLNDVLCDPSLKEVEHGTWDRDK
DSGLTYECRTLLFKALHNLIERCLLSKNFVRLGKWFVMPQDHSTGDRSCHLSFCFHFFLH
GESQVCASIEVKQHSPVWRLTHHHLNLLQDTQIHFQVILAPYGLNGTLTGQTYRDTDPHN
RFLFQQWNQYYPFDPDETKDYDPNRLPNLVEVLVGGVRMRYPSAYVLICETDETASRVQS
VAGAPDTLGGRAHPSSLHPPGHLTPPHSPNPHLQGAVGGGEGGGKMGVGFGEGRMSTLPS
IAEVLGHQITERVAQDSTLTTGSHAAPRRSQEGGAEENPNSGAWNFADPSTKVNCNCVKH
RKMKAAAQAKSKSSGKKDKDSEKEKGEKGDKEKGDKEEKKTERLERQQSRHGRSSVPFHR
RQAAMDDMLQDDMERIMNHLPPNPAFCPTGSTTIPPQGGSTPVPEGPMDTPNSAPSPLDP
PPNLPSMEPTMPTLSPHPPSKFLGGGGGGGTAVNGAAAGGGGQAATSAATATANNNNSSN
VVNNSGVSGGNATAAATNNSAGDKDATGRNNNSGGGGGLANGTVDQPGGGTDPANPLPNG
SLNSEFFPKSDELTCGQGAATPQPPKAATGAGVVGGAGGGAPVPPDAQLPWGESSKKELV
SNWLQSQHKCVESVLKRPSLPTNGSDEEEELVTRSLYDHDIVQKWVHFPLKKSRFEILPE
MAQPVAGTSGLEPISPPLEHSQRNMLPRSPSPDPYEFSDEASVNPATMTARTRPNRDRQS
PRLGDEAGEYGQEDMANDIGQVDSPLHSSGNLMREKDLQVSGAHKDLAQLFESDSSADDD
NDGGHMDICYPNSKTLEELKSVGIKLPNDPSETPVIAVSELTRMYPTPPSLETCTKHSPQ
DTAAEQPMDITVLLDGHIQTVVKTELLHPPAKVKPVSHEDHSKFDVFVPLKQATYVSAPK
YSQLPRSQLSSPPAGAIPEYKPQPHWPFGLPMMDAMHPPRTNYVNLPSVEGMSSRPMPSP
AFAQQQRTPRTPMSYELQSPASTPSSYLNKTLNSIDNTGTGSPLPEVNSLLVNVLLSDSI
LNLYRDYNFDSCNVCVCNMDIRGSDMGLYLPDTGSSSESSYKCTCGFSAVINRRFAYNNG
LFYEDEVDVTGIKHDRYEQRKPPLHMLPEGKGGGAEIEDIPSDVLHLLMGQFAVAFPSSV
AAGQLAALNMAASMSFNNSALDQMGLRDGNEAVYTTLDVARQAQDNHYTHKMDDHSMRMT
CLHKWPFIKGAHRLAHNSQDIVQCLKSLQPLLQDAIQYKPITRLWEHTYKLQGPLSWKDF
HQLSGRGSVESSEPQPIPHLLVTHDRDWLSVSPYSIRFWDKQYLEPFSRPRDIIYVVVAP
DNEFLLQHVRSFFRELSTVYELCRLGRHVPFKPLRDGIMRIGKNTAQKLTQDSVDDWFSL
LGDNPIAPKLKLYAQVLKQLLGPLLGQHNLDRSAFDTGSGASHKAQFKTPEPATPSHPAT
PESNQSPAPGGTTPNSSSTTPNSGQANNDENKGDGSQGEGAGQKENATEQEIPEDSTMPA
VVVYLVDPFLFGQEWSDLHRLAMVGLLRSYQQMVLPPHLQNNTFLQVVPMKTILDHQESS
AQHQALKSLAFSVFTSCRWNLAHTITARSLTGFGPAAGAEIFLKSKPVSVADAEPGNPMR
LYSPPYTLAPLKNQQTQLAECCGEAAEKANILFVTYCLSHDQRFLLAVCTDNRGEMLDTC
IINIHIPNRNLRKKASARKHGLAKLWDYILGIISMSTRPARIVIGRLGRMGHGELKGWSG
LLGKRNLQHASRRVKETCGQCSLAQEAPCVRSACVVSMEMNPSFQVMADTVKQEEKQSSN
CPLQTPRDASVTHILVFPTSATAQVNANPMQPGDPNNPMDNYDPLDMFPDDVFQMSDVQG
ELGGMGQGMEGMDFMDILDSDHLLDNQPGSPNANQDRARQSSRTNEQSSIPNGQIANDPQ
DDNNLLQQPLAMGYFLSTAPTGPLPHWFWSSCPENQHTSPVCFKAALHVNMSSRQWQDDL
DHSSASPSNSNHPLDSHLTCDVLRFVLANYNSLSWLTYDPATNDRRSCLPVHKAVLMQMY
HAMQAYL
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacccaaatccgactggaaacggttgtactttggaggattgctacaccaatctc
ttcgttttgacggacatttgtggaataaaatggcgccggctgattgtggataacgcggcg
tttgaccagttggatgaccccgtgctcatagcttacacaaaatgcattcagaaggatatc
ctgtgtgtctggcgccgtgttctgagaaattcagaacagcagctaaatccaagcgaccag
ctgtcgtacaacaaagagctgtgggtattctggtacggcgatccgccaagctttttgaac
gacgtgctgtgtgacccgagtttgaaagaagtggagcatggaacatgggacagagataaa
gacagtggactgacctatgagtgccgcacacttctcttcaaagcactgcacaacttgatt
gaaagatgcttactttccaaaaactttgttcgccttggcaagtggtttgtgatgccacag
gaccactctacaggagacagaagctgtcacctgtccttctgcttccacttcttcctgcac
ggggagtcgcaggtgtgcgccagcatcgaggtgaagcagcactcacctgtgtggcgcctg
acccaccaccacctcaacttgctacaggacacgcaaattcacttccaagttatcttggcc
ccctacggtctgaatggaacgctaacaggtcagacgtatcgggacaccgacccacacaat
cgcttcctcttccagcaatggaaccagtactatccctttgacccagacgaaaccaaagat
tatgaccccaaccgtcttcctaacctcgtggaagttctcgttggtggtgtgcgcatgcgc
tacccgtccgcttacgtcctcatctgcgaaacggacgagacggccagtcgcgtgcagtct
gtggctggtgctcctgacacgctcggtggacgcgcacacccctcttccctccaccctcca
ggccatctcactcccccacactcccccaacccccacctgcaaggagcagtgggaggaggg
gagggagggggcaagatgggggtggggttcggcgaggggcggatgtcgaccctccccagc
attgctgaggtgcttggacatcagatcacggagagagtggcgcaagattccaccctcacc
accggatcacatgctgcgccgaggaggtctcaggaaggaggggcagaggaaaatcctaac
tctggggcctggaactttgccgacccttccactaaagtcaactgcaactgtgtcaaacat
cgcaagatgaaagctgcggcgcaggccaagtccaagtccagtgggaagaaggacaaggac
tctgagaaggagaaaggagagaaaggggacaaggagaagggggacaaggaggagaagaag
acagaacgactggagcggcagcagtcacgccacggtcgcagctcggtgcccttccaccgt
cggcaggcggccatggacgacatgctgcaggacgacatggagcgcatcatgaaccacctg
cccccaaaccccgccttctgccccaccggctccaccaccatcccccctcagggcggctcc
acaccggtgccggaagggcccatggacacgcccaactctgcgccttcaccgctggacccc
ccgcccaacctgccctccatggaacccaccatgcccaccctcagtccccatcctcctagc
aagtttctggggggtggaggaggaggggggaccgcggtgaacggcgctgcagcaggagga
ggtgggcaggcagccacctctgctgccaccgccacggccaacaacaacaacagcagcaac
gttgtcaacaacagtggtgttagtggtggtaatgcaacagcagctgctacaaacaacagc
gcaggagacaaagacgcgactggccgtaacaacaacagcggcggtggtggtggtttggcg
aatggcactgtggatcagccaggtggcggtacggaccctgccaatcctttaccgaacggc
agcttgaactcggagttcttccctaaaagtgacgagttgacttgtgggcagggggctgcc
accccccagccccccaaggcagcaacaggggcaggtgtggtggggggagcagggggtggc
gccccagtcccacctgacgcccagttaccgtggggtgagtcgtcgaagaaagagctggtg
tcgaactggttgcagtcacagcacaagtgtgtggagagcgtgctcaagcgcccttcgctg
cccaccaatggttctgacgaggaggaggagctagtcacgcggtccttgtatgatcatgac
attgtgcaaaaatgggtacactttcctctgaagaaaagccggtttgagatcttgccagaa
atggcacagcctgtggcgggaaccagtgggctggaacctatctcaccaccgctggaacat
tcccaacgcaacatgctgccacgatcgccatctccggacccttacgagttttcagacgag
gcttccgtcaaccctgctaccatgacggccagaacgcggcctaacagagatcggcagtcc
cctcgtctgggagatgaagctggcgaatatggtcaagaagacatggcaaatgacattggg
caagtggattcgccgctgcactcctcgggcaacctgatgcgggagaaagatctgcaggtc
agcggggctcacaaagatctggcgcagctcttcgaatctgactcctctgctgacgatgac
aacgatggagggcacatggatatctgctatcccaatagcaaaaccttggaggagttgaaa
tctgttggcatcaagttaccaaatgatccatctgagacacctgtgattgccgtctcagaa
cttacccgcatgtaccccacgcctccgtccctggaaacatgcaccaagcactccccgcag
gacacggccgcagaacagcccatggacatcacagtcctgctggacggtcacatccagact
gtggtcaagacagagcttttgcatcctcctgccaaagtcaagccggtcagccatgaagat
cattcaaagttcgatgtgttcgtgccactcaagcaggcaacgtatgtcagcgcccccaaa
tactctcagcttccacgcagtcagctatcgtctccgcctgctggggcaattccggagtat
aagccccagccccactggccgttcggcttgccaatgatggacgccatgcaccctcccaga
acaaactacgtcaacctgccatcggtggaaggaatgagctcgcggcccatgccgtctcca
gccttcgcccagcagcagcgcactccccgcacccccatgtcctacgagctgcagtccccg
gcctccaccccctcctcctaccttaacaagaccctcaactccatcgacaacacgggcacc
ggctccccgctccccgaggtcaactccttgctggtcaacgtgctgctgtccgactccatc
ctcaacctctaccgcgactacaacttcgacagctgtaacgtttgtgtgtgcaatatggac
atccgtggctccgacatgggcctctaccttccagacacaggcagctcttccgagtcgtcg
tacaagtgcacttgtggtttcagcgctgtcatcaacagacgctttgcctacaacaacggc
cttttctatgaggacgaggtggatgtgacaggcattaagcacgatcgttacgagcagcgc
aaacccccgttgcacatgctgccggaggggaagggtggtggggcggagatagaagacatt
ccgtcggatgtgttacatttactgatgggacagtttgcggtggccttccccagcagtgtg
gcggccggtcagctggcagcgctcaacatggccgcctccatgtctttcaacaacagcgcc
ctcgaccagatggggctaagggatggcaatgaagcggtgtacaccacgttagacgtagca
aggcaagcccaagacaaccactacactcacaaaatggatgatcatagcatgcgcatgacc
tgtctccacaaatggccattcatcaaaggtgctcaccggttagcgcacaactctcaggac
atcgttcagtgcctcaagtccctgcagcccctcctgcaggacgccatccagtacaagccc
atcacgcgcctgtgggagcacacctacaagctgcagggacccctctcatggaaagacttc
caccagctctctgggcgaggatcagtggaaagcagtgaaccacagcccatcccccacctg
ctggtcacgcatgatcgagactggctctctgtctctccctactccattcgcttctgggac
aagcagtacctggagcccttcagccgtccacgggatataatctacgtggtggttgccccc
gacaacgaattcctgcttcagcatgtgcgtagtttcttccgtgagctgagtacagtgtat
gagttgtgtcgcctgggccgccacgtgcccttcaaacccctgagggacggcatcatgcgc
atcggcaagaacacagcgcagaaactcacgcaggactccgttgatgactggttcagtctc
ctgggcgacaatccaattgctccaaagttgaaactgtatgcccaggtgctcaaacagtta
ttaggtcctctgttaggtcaacacaatttggacaggtcggcgttcgacactggttcagga
gcgtcccacaaggcccagttcaagacgccagagcctgctaccccctcccacccagccacc
ccggaatctaaccagtcccccgcacccgggggtacaaccccaaattcctcctccaccact
cccaactctggccaggccaacaatgacgagaacaaaggggacggcagccagggagaagga
gcagggcagaaggagaacgcgacggaacaggagatcccggaggacagcacaatgccggcg
gtggtagtctacctggtagaccccttcctgttcgggcaggagtggtcggatctgcatcgc
ctggccatggtgggcctgctgcgcagctaccagcagatggtgctgccccctcacctacag
aacaacactttcctgcaggtggtgccaatgaagacgatcctggaccaccaagaaagcagc
gcccagcaccaagctctcaagtctctggccttctctgtcttcacctcctgtcgctggaac
ctggcccacaccattaccgctcgttccctcaccggcttcggccctgccgctggcgctgag
atattcctcaagagcaagccggtcagtgtcgctgacgctgagcccggcaaccccatgcga
ctgtacagcccgccctacaccctggcccccttgaagaaccagcagacccagctggctgag
tgctgcggcgaggccgcggagaaagccaacatcctcttcgtcacctactgcctgtcgcat
gaccagcgcttcctgctggccgtctgcaccgacaaccgtggcgagatgctggacacctgc
atcatcaacattcacattcctaacaggaacctgcgaaagaaggcctcagcacgcaaacat
ggcctggccaaactgtgggactacatcctgggcatcatctccatgtcaacacgccccgcc
aggattgtcattggtcgactagggcgcatggggcatggagaactcaaagggtggtcaggg
ctgctgggcaagcggaacctgcagcacgccagtcgccgcgtcaaggagacctgcgggcag
tgctccctggcccaggaggccccctgcgtgcgcagcgcctgcgtggtctccatggagatg
aaccccagcttccaggtcatggccgacacagtcaagcaggaggagaagcagagttccaac
tgtccgctgcagacgcctcgggacgcgtctgtcacccacatcctcgtcttccccacttcc
gccacggctcaggtgaacgccaaccccatgcagcccggcgaccccaacaaccccatggac
aactacgaccccctggacatgttccctgacgacgtcttccagatgtcggatgtgcaaggg
gagctcgggggcatgggtcaaggcatggagggcatggacttcatggacatcctggactct
gaccacctgctggacaaccagcccggctcgcccaacgccaaccaggaccgcgcccggcag
tcgtcgcgcaccaacgagcagtcctcgattcccaacggtcagatagccaacgacccccag
gatgacaacaacctgctgcaacagccactggccatgggctacttcttgtccaccgcaccc
acaggccccctcccccactggttctggtcatcctgtcctgagaaccagcacacctccccc
gtctgcttcaaggcggcgttgcatgtcaacatgtcaagtcgacaatggcaagacgacctg
gatcactcctcggccagtcccagcaacagcaaccaccccctcgactctcaccttacttgt
gatgttctcaggtttgttctggccaactacaactccctgtcatggctgacctacgacccc
gccaccaacgaccgccggtcctgtcttcctgtgcacaaagcggtgctcatgcaaatgtac
cacgccatgcaggcctacctctga
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