Littorina saxatilis: 138976604
Help
Entry
138976604 CDS
T10665
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
lsax Littorina saxatilis
Pathway
lsax04142
Lysosome
lsax04144
Endocytosis
lsax05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138976604
04142 Lysosome
138976604
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138976604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138976604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsax04147
]
138976604
Membrane trafficking [BR:
lsax04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138976604
Exosome [BR:
lsax04147
]
Exosomal proteins
Proteins found in most exosomes
138976604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
138976604
NCBI-ProteinID:
XP_070205566
LinkDB
All DBs
Position
LG9:complement(58246985..58293613)
Genome browser
AA seq
1678 aa
AA seq
DB search
MSQILPIRFQEHLQLQNVGINAANIGFSTLTMESDKFICVREKVGETAQVVIIDMNDTAN
PIRRPISADSAIMNPTSKVIALKAGKTLQIFNIEMKSKMKAHTMVDEVIFWKWISVNMIG
LVTDQHVYHWAMEGDSQPLKMFDRHSNLTGCQIINYRTDAKQNWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAAAFANFIVEGNPNPSTLFMFAVRGPQGGKLHVIEVGSPPTGN
QPFTKKAVDVFFPVEAQNDFPVAMQTSHKHGVVFLITKYGYIHLYDIETGTCIYMNRISG
DTIFVTAAHEATSGIIGVNRKGQVLSVSVEEENIVPYITNTLQNPDLALKMSARCNLPGA
EDLFVRKFNNLFQAGQYQEAAKVAASAPKGILRTPQTIQRFQQVPSTTGTTSPLLQYFGI
LLDKGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKTADPTLALSVYL
RANVPQKVIQCFAETGQFQKIILYSKKVGFTPDYIFLLRNIMRINPEQGLQFAQMLVADD
EPLADLNQVVDVFMEFNLIQQCTSFLLDALKNNRPAEGPLQTRLLEMNLMSAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVTYFGSLSV
EDSLECLKAMLTANIRQNLQVCVQIASKYHEQLSTDSLIELFESFKSYEGLFYFLGSIVN
FSQEQDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPARLPVVVGGLLDVDCTEDVIKQLILVVKGQF
STDELVEEVEKRNRLKLLLPWLETRVHEGVNEPATHNALAKIYIDSNNNPERFLRENQYY
DSRVVGKYCEKRDPHLACVAYERGQCDEELIKVCNENSLFKSEARYLVRRRDPDLWATVL
NEDNEYRRQLIDQVVQTALSETQDPEEISVSVKAFMTADLPNELIELLEKIVLESSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFKKFEVNTS
AIQVLIDNVNNLDRAYEFAERCNDPSVWSQLARAQLNKGMVKEAIDSYIKADDPSQYMEV
VQVASASDNWEDLVKFLQMARKKARETFVETELVYAYAKTGRLADMEEFISGPNHANITQ
VADRCFDNKMYDAAKLLYNNVSNYARLAITLVHLGEYQGAVDGARKANSTKTWKEVCFAC
VDNEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELIALLEAALGLERAHMGMFTEL
GILYSRYKPEKMREHLELFWSRVNIPKVLRAAESAHLWPELVFLYDKYEEYDNAILTIMN
HPTEAWRESQFKDIITKVANIELYYKAIQFYMDFRPMLLNDLLMVLTPRLDHTRAVTFFL
KTNQVPLVKPYLRSVQKNNNKAINEALNNLFIEEEDYQSLRASIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVDLCKKDRLFKDAMMYASESRHIETAEDLIEWFLDS
NNHECFAACLFQCYDLLRPDIILELAWRHNIIDFAMPYMIQIMREYCSKVDKLEQSDAVR
SEEEQKAEERPIVLGEAQLMLTAGPAPMGMVPPQQQGYGAAPGYGGMPAGMPAYGYSM
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagattttaccaatacgatttcaggagcacctgcagctccaaaatgttggcatc
aacgcagccaacattgggttcagcaccctcaccatggagtcagataagttcatctgtgtc
cgggagaaggtgggcgagacggcgcaagtggtcatcatcgacatgaacgacaccgccaac
cccatccgccgacccatctccgctgattctgccatcatgaatcccaccagcaaggtcatc
gcccttaaagctgggaagacactgcagatcttcaacattgagatgaagagcaagatgaag
gcgcacactatggttgatgaggtgatcttctggaagtggatttcagtcaacatgatcggt
cttgtcacggatcagcatgtgtaccactgggccatggaaggtgattcccagccgctcaag
atgtttgatcgtcactccaacctgaccgggtgtcagatcatcaattaccgcacggatgcc
aagcaaaactggctgctgctgatcggcatctccgcacagcaaaaccgggtggtgggagcg
atgcaattatactctgtggaacggaaagtcagtcagcccattgaagggcacgccgcagcc
tttgccaatttcatcgtggagggaaatcctaacccctccactctcttcatgtttgcggtt
agggggccacagggtgggaagttgcatgtgatcgaagttggatcgccacctacaggcaac
cagcccttcaccaagaaagctgtggatgtcttcttccccgtggaggcccagaacgacttc
cctgttgctatgcagacaagtcataaacacggggtggtgttcctgatcaccaagtacggg
tacatccacctctacgacattgagacgggaacgtgcatctacatgaaccgtatcagcggt
gacaccatcttcgtcaccgccgctcatgaggccactagcggcatcattggagtcaacagg
aaaggacaggtgctgtctgttagtgtggaggaggagaatatcgtcccctacatcaccaac
accctgcaaaaccctgacctggcgctgaaaatgtcagctcgctgcaacctgccgggagcc
gaggacctgtttgtacgcaagttcaacaacctcttccaggcaggacagtaccaggaggct
gccaaagtcgccgccagtgcccccaagggaatcctgcgcacgccacagaccatccagcgt
ttccagcaagtgccgtccaccacgggcaccacgtcgccgctgctgcagtacttcggcatc
ctgctggacaagggtcagctcaacaagtacgagtccctggagctgtgtcgcccagtcctg
cagcaaggccgcaagcagctgctggagaagtggctcaaggaagacaagctggagtgctgt
gaagagctcggtgacctggtgaagactgctgaccccaccttggctctgtccgtttacctg
cgtgccaatgtcccgcagaaggtgatccaatgtttcgcggagacaggccagttccagaag
atcatcctgtactccaagaaggtgggcttcacacccgactacatcttcctactgcgcaac
atcatgcgcatcaacccggagcagggcctgcagttcgcccagatgctggtggcggacgat
gaacccctggctgacctcaaccaggtggtggacgtcttcatggagttcaacctgatccag
cagtgcacgtccttcctgctggacgccctcaagaacaaccgacctgctgaggggccgctg
caaacccgcctgctggagatgaacctcatgtccgctcctcaggtggctgatgccatcctg
gggaaccagatgttcactcactatgaccgtgcccacatcgctcagttgtgcgagaaagct
ggactgctccagagggctctggagcactacactgacttgtacgacatcaagcgtgctgtt
gtgcacactcacctccttaatcctgagtggctggtgacgtattttggctcgctgtcggtg
gaggactccctggagtgcctcaaggccatgctgaccgccaacatccgccagaacctgcag
gtctgtgtccagatcgcctccaagtaccacgagcagctctctaccgactcgctcatcgag
ctcttcgagtcattcaagagctacgaaggtttgttctacttcctgggttccatcgtgaac
ttcagccaggagcaggacgtgcacttcaagtacattcaggccgcctgtaagaccggacag
atcaaggaagtcgagagaatctgtcgggagagcaactgctacgaccccgagcgtgtcaag
aacttcctcaaggaagccaagttgaccgaccagctgccgctgatcatcgtgtgcgaccgc
tttgactttgtgcacgaccttgtgctgtacctgtaccgcaacaacctgcagaagtacatc
gagatctacgtgcagaaggtgaacccagcgcgtctgccggtggtggtgggcggcctgctg
gacgtggactgcacagaggacgtcatcaagcagctcatcctggtggtaaagggacagttc
agcactgacgagctagtcgaggaggtggagaagagaaacaggttgaaacttctgctgccg
tggttggagacgcgtgtccatgagggtgtgaacgaaccagccacccacaatgccctggcc
aagatctacattgacagcaacaacaaccctgagagattcctcagagagaaccagtactat
gacagccgcgtggtgggcaagtactgcgagaagcgtgacccccacctggcctgcgtggcc
tacgagcggggccagtgtgacgaggagctcatcaaagtgtgcaatgagaactccctcttc
aagagcgaggcgcgctaccttgtgcgtcgtcgtgaccctgacctctgggccaccgtcctt
aacgaggataacgagtaccgccgccagctcatcgaccaggttgtgcagacagcgctgtcg
gagacccaggaccctgaggaaatctccgtgtcagtgaaggccttcatgacggccgacctg
cccaacgaactcatcgagctgctggagaagatcgtgcttgagagctccgtcttctctgaa
cacaggaatctgcagaacctgttgatcctgacggccatcaaggctgatcgcacgcgcgtc
atggagtacatcaaccgcctcgacaactacgacgcccccgacattgccaacatagctatc
agtaacgaactttacgaggaagctttcgccatcttcaagaagtttgaggtcaacacctct
gctattcaggtgttgatagacaacgtgaacaacctggaccgagcgtacgagtttgccgag
cgttgcaacgaccccagcgtgtggagccagctggcgcgcgcccagctgaacaagggcatg
gtgaaggaggccatcgactcctacatcaaggccgacgacccctcccagtacatggaggtc
gttcaggtcgccagcgccagtgacaactgggaggacctggtcaagttcctgcagatggct
cgcaagaaggcccgggaaactttcgtggagacggagctggtctacgcctacgcaaagact
gggagactggccgacatggaggagtttatttctgggcccaaccacgccaacatcactcag
gttgccgaccgttgctttgacaacaagatgtacgacgcggccaagcttctgtacaacaac
gtgtcaaactacgctcgcctggccatcaccctggttcacctgggcgagtaccagggcgct
gtggacggcgctcgcaaggccaacagcacaaagacgtggaaagaagtgtgtttcgcctgt
gtagataacgaagaatttaggttagcccagatgtgtggcttgcatatagtggtacacgct
gacgaactagaagaactcatcaactactaccaggacagaggctactttgaagaattgata
gctttgctagaagcagctctcggtctggagcgagctcacatggggatgttcacggagctg
ggcatcctgtactccagatacaagccggagaagatgcgtgaacatctggagctcttctgg
tccagggttaacattccaaaggtgttgagggcagcagagtcagcccacctgtggccagag
ctggtgttcctgtacgacaagtatgaagagtacgacaacgccatcctcaccatcatgaac
caccccactgaggcctggcgcgagagccagttcaaggacatcatcaccaaggtggcgaac
attgagctgtactacaaagccatacagttctacatggacttccgacccatgctgcttaac
gacctgctgatggttctgacccctcgtttggaccacacgcgcgctgtcaccttcttcctc
aagacaaaccaggtcccgctggtgaagccgtacctgcgctcagtgcagaagaacaacaac
aaagccatcaacgaggcgctcaacaacctgttcatcgaggaagaggactaccagagtctg
cgggcctccatcgatgcttacgacaactttgacaacatttcacttgcccagcgcctggag
aaacacgagctgatcgagttccgtcgtatcgccgcttacctttacaagggcaacaaccgc
tggaagcagtctgtcgacctttgcaagaaggatagacttttcaaggatgccatgatgtac
gcgagcgagtcccgacatatcgagacagcggaggacctgatcgagtggttcctggacagc
aacaaccacgagtgtttcgccgcctgtctcttccagtgctacgacctgctgcgacccgac
atcatcctggagctggcctggaggcacaacatcatcgactttgccatgccctacatgatc
cagatcatgagggaatactgctccaaggtggacaagctggagcagtcggacgcggtgagg
agcgaagaagaacaaaaagccgaagaaagacctatagtactgggcgaggcccagctgatg
ctgacggcaggaccggcccccatgggaatggttcctccccaacagcaaggctacggagcc
gctcccggctatggtggcatgcctgctgggatgcccgcttatggctacagcatgtaa
DBGET
integrated database retrieval system