KEGG   Littorina saxatilis: 138977058
Entry
138977058         CDS       T10665                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
lsax  Littorina saxatilis
Pathway
lsax00565  Ether lipid metabolism
lsax01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lsax00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    138977058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsax03036]
    138977058
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsax04147]
    138977058
Chromosome and associated proteins [BR:lsax03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    138977058
Exosome [BR:lsax04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138977058
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3 LisH_PAC1 Beta-prop_DCAF12 Beta-prop_RIG_2nd Beta-prop_SPT8 Nucleoporin_N Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_2nd Beta-prop_WDR19_1st LisH Pox_A_type_inc Lactonase
Other DBs
NCBI-GeneID: 138977058
NCBI-ProteinID: XP_070206071
LinkDB
Position
LG9:32546966..32581231
AA seq 407 aa
MVLSQRQKDELNKAISDYLGANGFHTAQEHFQKEASLSGEMEKKYSGLLEKKWTSVIRLQ
KRVMDLEAKLAEAEKEVNSGAPTRDRRSPSEWIPRPPERYTLSGHRSPITKVVIHPVFAL
MVSASEDATIKVWDYETGDYERTLKGHTDSVQDIAFDNTGKLLASCSADMTLKLWDFQGF
ECLKTMYGHDHNVSSITFMPNGDFIVSSSRDKTIKMWEVATGYCVKTYSGHREWVRMVRV
NQDGSLLASCSNDQTLRVWVVSTKECKMELREHEHVVECLAWAPEAAAPAITEASNMDSK
VKIPGPFLASGSRDKTIKFWDVGTGLCLFTLIGHDNWVRGLVFHVGGKYLLSASDDKTLR
IWDIANKRNHKTLQAHNHFVTSLDMHKSSPYVVTGSVDQTVKVWECR
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggtgctctcacagcggcaaaaggatgaattaaacaaggccatctcagactacctgggc
gccaatggcttccacacagctcaggagcacttccagaaggaagcctctctgtctggtgaa
atggaaaagaagtacagtggcttacttgaaaagaaatggacgtctgtcattcgacttcaa
aaaagggtgatggacctggaggccaaactggcggaggcggaaaaagaggtcaactcaggg
gcacccacccgcgaccgccgctccccttccgaatggatcccccgtcctcccgagcgctac
acgctgagcggccatcgcagccccatcaccaaggtggtcatacaccccgtcttcgccctc
atggtctcggccagcgaagacgctaccatcaaggtgtgggactatgaaactggtgactac
gagaggacactgaaggggcacacagattccgtgcaggatattgcctttgacaacactggc
aaattactggcctcctgttcggccgacatgacgctcaagttgtgggacttccagggcttt
gagtgcctcaaaaccatgtatggtcatgaccacaatgtatccagcatcactttcatgccc
aacggagatttcatcgtttcgtcgtctcgagacaaaaccatcaaaatgtgggaagtagct
acaggctactgtgtaaagacgtacagtggtcacagggagtgggtgcgcatggtgagagtc
aaccaggacggctctctactggccagctgctccaatgatcagacgttgcgtgtgtgggtg
gtgtcgaccaaggagtgcaagatggagctgcgggaacacgagcatgtggtggagtgtctg
gcctgggcccctgaggccgccgcgcccgccatcactgaggcctccaacatggactcaaag
gtgaagatcccaggtcctttcctggcatcaggatcccgtgacaagaccatcaagttctgg
gacgtgggaacagggctctgtctcttcactctgattggtcacgacaactgggtgcgagga
cttgtgttccatgtaggaggcaagtacctcctgtcggcttctgacgacaagactttgcga
atctgggatatagccaacaagcgcaaccacaaaactctacaggcgcacaaccattttgtt
acttctttggacatgcacaagagctcaccctacgtggtgacgggaagcgtggaccagaca
gtcaaagtatgggagtgtcgctaa

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