Littorina saxatilis: 138977201
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Entry
138977201 CDS
T10665
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
lsax Littorina saxatilis
Pathway
lsax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138977201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsax03009
]
138977201
Ribosome biogenesis [BR:
lsax03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138977201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_HPS5
WDR54
Beta-prop_Vps41
WD40_like
PEP5_VPS11_N
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
138977201
NCBI-ProteinID:
XP_070206209
LinkDB
All DBs
Position
LG1:complement(69843377..69936068)
Genome browser
AA seq
533 aa
AA seq
DB search
MATAFKKTPHVNPLTKFGEKSTTDNLYWNNLDVPITKKEYGNITHIEFSPVAPYNYAVTN
STRVQIYSSRSNQIVRSLNRFNEAANCGSFRSDGKLLVAGSDDKMVRLFEPTGRSLLRVF
KGHKEAVLVTRFLADNKRIMSASKDRTVRVWDIASETEVAHYAEFKDYVKCGVASQSSPD
IFLTGAYDHTAKLFDARTESSVLTVDHGHPIESVLLFPTNGIFLTAGSNIVKVWDALAGG
RQLTQLCHHHKTVMSLCFCSRYQRFMSGSSDRHVKIYDVGSYQVVHSLDYPANILSVAVA
PDDSVVAVGMEGGLLSIQHRNKDKVKVQETKKKQATFHYKLKYRHFKPEGEDMVVAQKRK
EKMARYDNLLKRFEHSKALDAAMEPHVRSQTPEITMGVLLELTRRGALKAALAGRDTHQV
QTMLKFIQRNMWRPNFSHMTDLLNVVLDLYEGEIAGNAVLESSVARVADIGDCEQAYDVE
LMRVKGMLEGMFSAREAAMTTTDGLEGGGGEGVSGESLMGGALLPSAAAIEVT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgccttcaagaaaacaccgcatgtgaatcctttaaccaagtttggcgagaaa
agtaccaccgataacctttactggaacaacttagacgttcccattaccaagaaagagtat
ggcaacatcacacacattgagttcagccctgtggctccttacaactatgcggtcacaaat
tctaccagggttcagatctacagctctagatccaaccaaattgtacgcagtttgaaccgc
ttcaacgaggcggcgaactgtggcagtttccgctccgatggcaagctcctagtggcagga
agtgacgacaaaatggtgcgactgtttgaaccaactggtcgctctcttctccgagtattc
aagggccacaaagaagctgtgctggtgaccaggttccttgcagacaataagcgcatcatg
tcggcctccaaagacaggactgttcgtgtctgggacattgcttcagagactgaggtcgca
cactacgccgaattcaaggattacgtgaagtgtggtgttgcgagccagtcaagccctgac
atctttctgacaggtgcctatgaccacacggccaagctgttcgatgctcgcacagagtct
agtgtcctgacagtggaccatggtcatcccattgagagtgtcctgctctttcccaccaac
ggcatcttccttactgcaggaagcaacattgtgaaggtgtgggacgctctggccgggggc
agacaactcacgcagctgtgccatcaccacaagacagtgatgtccctttgcttctgctct
cgctatcaacgcttcatgtccgggtcaagtgatcggcacgtgaaaatctatgacgtgggg
agctaccaagtggttcactctctggactatccagccaacatcctcagtgtcgcagttgct
cctgatgacagtgtggtggcagttgggatggaggggggtctgctgtccatccagcaccgc
aacaaggacaaggtcaaggtccaagagaccaagaagaagcaggccaccttccactacaag
ctcaagtacaggcacttcaaaccagaaggggaagatatggttgttgcccaaaaacgaaag
gaaaagatggcacgctacgacaacctcctcaaacgctttgaacattccaaagcattggat
gcagctatggagcctcatgtgagatctcagacgccagaaataacgatgggagtgctgctt
gaattgaccagacggggagcactgaaggcagcgctggctggtagggacactcaccaagtg
cagaccatgctcaagttcatccagagaaacatgtggaggcccaacttcagccacatgact
gacctgcttaatgtagtactggacttgtacgaaggagaaatagccggcaacgcagtgcta
gaatccagcgttgcaagagtagcagacatcggggactgcgagcaagcctacgacgtcgag
ctgatgcgagtcaagggcatgctggaggggatgttctccgctcgcgaggcagcgatgacc
acaactgacggcttggagggaggaggaggggagggagtcagtggagagtctctgatgggg
ggagctctgcttccttctgctgctgctattgaagtcacatag
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