Littorina saxatilis: 138977211
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Entry
138977211 CDS
T10665
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138977211
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
138977211
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
TolA_bind_tri
LEKR1
ACBP4_C
AAA_29
AAA_25
LPP
Rv2240c
Motif
Other DBs
NCBI-GeneID:
138977211
NCBI-ProteinID:
XP_070206218
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All DBs
Position
LG1:70096553..70144031
Genome browser
AA seq
1082 aa
AA seq
DB search
MHQDRRRALAPANNHTISSRGDAAVRGKSRAENGDPNSFKEGAIVRIKLENILTYESVEF
YTGPSLNVIIGPNGTGKSAIVCAICLGLAGKTGWLGRASSPGDFVRYGTNKGTIELELYN
CDGENYVIRREITKGRDNKATSNWWVNGRAAILKSVEEMVARLNIQVGNLVQFLPQEKVA
DFARMTPQELLDSTEKAVGPPEMFKIHQQLIQMGQTTHDLDKRLETMRKELDTEVQKNAR
LEPDVKNFREREKFLEKVNILKMKRPWLEYTDLKLVFESKKGQRDLKNEDLKRVEREHAP
MMARKKTLEDLKTTLEADLKQKTQEIRANANKVSESSRDLENLDEKIGFAKSDLDMKKAE
EEKRKKKLDDLTSQLAALEAELRQLQGADESHLAGEITEVSERMRQLTRDINAINQQGSG
LNTELNGLRREIQDAQQELRRIQDMGNQRLEQLRRRHKHTYDAVMWLRQNRNKFKATIHE
PMILCLQVNMPEHAKFVEMQISASDMRTFVCEDPDDLELFMKVMKDEQRLKVNAALVPAQ
PLSSFRPDYPIDRIRNYGFFSYVKDLFQCPEAVMRYVCVLYNVHRVPVGDATAHRNVEKI
IRDHPELRVFYTSHVQYSIKKSRYDGATSSRNTPLRDVQFFGTSIDRQREQGLLQDIQTL
QRSLEDKENGYRDLQRQQQEKERELNVLRERKKELSRQKDQKKRLEQQIQTKQESIRRVE
GEAIDMEAEERVMTTKISEIIAKKCENLATMHKHTQKCFELSKEKVCKSLQQAEAVRKFS
ALEAQLRDRTEGLNALRIEVEHLKQAVKEAKQNARLKLEEAKTVTNTGSSAELSPELKQA
FEACPQTIDELDDEIHRHQARADSIFQIDETVIKQYHDREREIARIQSSLEKQEQEEQRV
RGNVTEMRNQWLNPLKELIERINENFSFFFTAMGCNGEVDLSIPEDQEAYNKYGVRIKVK
FRDAEALKELTPFHQSGGERSVSTVLYMMALQELARCPFRCVDEINQGMDPVNERKVFEL
VVQTVCKKSASQYFLLTPKLLPDLEYVDNMKVLCVNNGPHVMSHKQWNLRAFLQRGAQVN
SQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagacaggagaagagctcttgctcctgcaaacaatcacaccatatcatcaaga
ggcgatgctgcggtcagaggcaagtccagggcagaaaatggcgacccaaacagctttaaa
gaaggagctatcgtgagaatcaaactggaaaacattttgacttatgagtcagtcgagttc
tacacgggtccaagcctgaacgtgatcatcgggccaaatgggacaggaaagtccgccatt
gtctgtgccatctgtttgggccttgcgggcaaaaccgggtggctgggtcgagcgagcagt
ccaggtgactttgttcgttatggcacaaacaagggtaccattgaactggaactttataat
tgtgatggtgagaattatgtcatacgacgtgagatcaccaaaggccgtgacaacaaagcg
acatcaaactggtgggtcaacgggcgggctgccatcctgaagagtgtggaagagatggta
gcacgcttgaacatccaagttggcaacttggtgcagtttctgcctcaggagaaggtggct
gactttgctcgcatgactcctcaggaattgctggacagcacagaaaaggctgttggaccg
cctgaaatgtttaaaatccaccaacagttgattcagatgggacagacaacacatgacctt
gacaagcgactagaaaccatgcgaaaggaactggacactgaagttcagaagaatgcccgt
ttagagcctgatgtaaagaacttcagagagagggagaaattcttggagaaagtcaacatc
ctgaaaatgaaaagaccctggctggaatacactgacctgaaattggtgtttgaaagcaag
aaagggcagcgtgacctcaagaatgaggacctgaagagagtggaacgagaacacgcacct
atgatggctcgaaagaagaccctggaggatctgaagactaccctagaagcagacctcaag
cagaaaactcaagagattcgagcaaacgcaaacaaagtcagtgaatccagcagagatctt
gagaacttggatgaaaagatcgggtttgccaagtcagatttggatatgaagaaagccgaa
gaagagaaaagaaagaaaaagttggatgaccttacaagtcagcttgcagctttggaggca
gaactgaggcagttgcagggagccgatgaatcgcatttagctggtgagattacggaagtg
agtgaaagaatgcgacagctgacgagggacatcaatgccatcaaccaacaagggtccggc
cttaacacagaactcaatggccttcgtagagaaatccaagatgcgcagcaagaactgcgt
aggatccaggacatgggaaaccaaagactagagcagcttcgtcgccgtcacaaacacacc
tacgatgctgtcatgtggctgcggcagaacaggaacaagttcaaggcgaccattcatgaa
cccatgatcctgtgtcttcaagttaacatgccagagcacgccaagtttgtggagatgcag
atttctgccagcgacatgagaacctttgtctgtgaagatcccgacgaccttgaactgttc
atgaaggtcatgaaagatgagcagcgtttgaaggtcaatgcggccttggttcctgctcag
cctttgtcatccttccgtccagactaccccattgacagaattaggaattacgggtttttc
agctacgtgaaagacctgttccagtgtccagaagctgtgatgaggtacgtgtgcgtcctg
tacaatgttcacagggtccccgtgggagacgcaaccgctcacagaaacgtggagaagatc
atccgtgaccacccagagttgagagtcttctacacctctcatgtgcagtatagtataaag
aaaagcagatatgatggtgcaacttcctcaagaaacacacctctgagggatgttcagttc
ttcggcacctccatagacagacagagggagcagggtcttcttcaagacattcagactttg
caaagatctctggaagacaaggaaaacggttacagagacttgcagcggcaacaacaggag
aaggaaagggaactgaacgttctgagggagcgcaagaaagaactgtctcgccagaaagat
cagaagaagcgccttgagcagcagattcaaacaaagcaggaaagtatcaggagagtggag
ggtgaagcaatagacatggaggcggaggagagagtgatgacgacaaagatcagcgagatc
atcgccaagaagtgtgagaacctggccaccatgcataagcacactcagaaatgctttgag
ctgagcaaggagaaggtgtgtaagagcctacagcaggcggaggcagtcaggaaattctcc
gcgctggaggcacagctccgcgacagaaccgagggcctgaatgcactcaggatagaggta
gagcacctgaagcaagctgtgaaagaggccaaacagaacgccaggctaaagctggaggaa
gcaaagacagtaaccaatactggatctagcgcagaactgtcacccgagctcaaacaggcg
tttgaagcttgcccacaaaccattgacgaactggacgatgagatccacagacaccaagcc
agggcagactccatcttccagattgatgaaacggttatcaaacagtaccacgaccgggag
agagaaattgctaggatacagtcatctctggaaaaacaggagcaggaagaacagagagtg
cggggaaatgtgacagaaatgcgaaaccagtggctgaatcccttgaaagaactgattgag
cgaatcaacgagaactttagttttttcttcaccgccatgggctgcaacggggaagtggat
ctaagcattcctgaagatcaggaggcgtacaacaagtatggagtgcgcatcaaggtgaag
ttccgtgatgcagaggccctcaaagagctgacgccgttccaccagagcgggggggagagg
agcgtgtccaccgttctctacatgatggcactgcaagagctggccaggtgtcccttcagg
tgtgtcgacgagatcaaccagggtatggacccagtgaatgagaggaaagtgtttgagctg
gtggtgcaaacagtctgcaagaagagtgcgtctcagtacttcctgcttactccaaagctg
ctaccagacctagagtacgtggacaacatgaaggttttgtgtgtcaacaacggacctcac
gtcatgagtcacaaacagtggaatctcagggctttcttacagagaggggcacaagtcaac
agccagtga
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