Littorina saxatilis: 138977487
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Entry
138977487 CDS
T10665
Name
(RefSeq) iroquois-class homeodomain protein irx-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsax03000
]
138977487
Transcription factors [BR:
lsax03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
138977487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
CDC45
Motif
Other DBs
NCBI-GeneID:
138977487
NCBI-ProteinID:
XP_070206464
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All DBs
Position
LG1:complement(50047820..50153525)
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AA seq
658 aa
AA seq
DB search
MTVEHFLQDCPTHQNLRAETWPADTPMRDKLYGPMESLRRTAAFIRASGVALLMPSSPPV
TPSSVAPGGGGGGGGGSGSGTGSGASPVGGGGSGGCCEGGRILGTNPHTGQPLCSCQYSP
GLLTYSRVAAGLSDSVYPTSPYTTPGYVPFGTDPSAFYPPLTSAYDLKEAGETWRGIGQP
GACYPYDPTGMPTYPYSNAYGAMDINGAARRKNATRENTNTLKAWLYEHRKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNRSGDADDDGNGDDDDDDEDGGKS
KDGDDDGEDGGGDGKEEKKDKGKEENGFCKEEKESLIPAEPKESVVQAKRLFDDDSHSPL
TSHTMHPHPHPHSHPHAHHSLHPPQQPPPSMQHHHQHHHRPPQPHHQHHQQHPQHHHQQQ
QQQHSPHDTGNFLGINSPSVSQPFPGGLSSAEAGGLSSPLDNAAGGGKRPDSLCSNSNDS
GLSDVNCNFSSAAEAQAAAAAAAAAAAAAGLDGSAPGGFRPKIWSLAHVATSDNSPSPYL
TSGAATSALSSRMVPGMVTSRSPGMENKPMGMSALGMGGPGGWNPGPSLYSGIPSRPGSF
GMGSMNMNPTHKGSLSAPMFSHPALSGMSSTSSGLPPPSNGGYTQLSSFYPQSKLSVD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggaacacttcctgcaggactgtccaacacaccaaaacttgcgagcagagacc
tggcctgctgacacaccgatgagggacaaactctatggacccatggagagcctccggcgt
acagcagccttcatcagggcctccggagttgctctgctgatgccaagctcacccccagtc
acaccctcttcagtagccccaggagggggaggagggggaggaggaggtagcggctctgga
actggttctggagccagtccagtgggtggtgggggttctggtggatgctgcgaggggggt
cgaatccttggtaccaaccctcacaccggacagccgctatgttcgtgtcagtacagtcca
ggactgctgacctattctcgggtggctgccggactctcggactctgtctacccgacctcg
ccctacaccaccccgggttatgtgcccttcggcaccgacccttccgccttctacccacct
ctgacgtcagcatacgacctgaaggaggccggtgagacgtggcgaggcatcggtcagccc
ggggcctgctatccttacgaccccacgggcatgcccacctacccctactccaacgcctac
ggcgcgatggacatcaacggcgcggcccgccggaagaacgccacccgggagaacaccaac
accctcaaggcctggctgtacgagcaccgcaagaacccctacccgaccaaaggcgagaag
atcatgctagccatcatcaccaagatgaccttgacccaggtgtccacgtggttcgccaac
gcccgccgtcgtctgaagaaggagaacaagatgacctggtcgcccaggaaccgcagcggc
gacgcggatgatgacggtaacggagatgacgacgacgacgatgaagatggaggcaagagc
aaggacggggacgacgacggggaagatggaggaggagatgggaaggaggagaagaaggac
aaggggaaggaggagaacgggttctgcaaggaggagaaagaatctctgattccggccgag
cccaaagagagcgtggtgcaggccaagcgactcttcgacgacgactcgcattctcctctc
accagccacaccatgcacccacacccacacccacactcacacccccacgcccaccatagt
ctgcacccgcctcagcaacctccaccttccatgcagcaccaccaccagcaccatcaccgc
cccccgcaaccccaccatcaacaccaccaacaacacccacaacaccaccaccagcagcag
caacaacaacactcgcctcacgacaccggcaacttcttaggcatcaactccccgtcggta
tcgcagcctttcccgggaggtctgagctcggcggaggctggaggactgagttctcctttg
gacaatgccgcgggcggtggcaagcgacccgactctttgtgctccaacagcaacgactcc
ggcctcagcgacgtcaactgcaacttctcctcagccgctgaggctcaagcagcagcggca
gcagcggcggcggcggcagcggcggcagggctagacggttccgcgcccggcgggttcaga
cccaagatctggtcgctggcccacgtggccacgtccgacaactctccttccccttacctc
acttccggcgcggccaccagcgccctcagctcgcgcatggtccccgggatggtgacgtca
cgaagtcccgggatggagaacaagcccatggggatgtcggcgttggggatgggtgggcca
ggaggctggaaccccggcccctccttgtactccgggatcccttccaggcccggttccttc
gggatgggctccatgaacatgaacccaacccacaagggttcgctgtccgcgcccatgttc
tcgcaccctgcgctatccgggatgtcttctacttcttcaggacttcctcctcctagcaac
ggagggtacactcagctctcctcgttctacccacagtccaagttgtcggtcgattga
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