Littorina saxatilis: 138978534
Help
Entry
138978534 CDS
T10665
Name
(RefSeq) exosome complex component 10-like isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
138978534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138978534
NCBI-ProteinID:
XP_070207377
LinkDB
All DBs
Position
LG10:complement(27836771..27860432)
Genome browser
AA seq
936 aa
AA seq
DB search
MASTRDEDVASSSTDNDNKNESPEEIFPGCSSITDFSQQMLRTVVQATKTSNDLPTGDDY
DYYSTYNSVRNVLDLEAGRILQLLQNVMRHQNVKGTITGTDHALELDEQFDVIIDANDQI
LERVGTWVDEATGVRKNEHKLVVSAMNRPNPAVASWNKKKSGTGSPSAPVQLLTARNIQR
PQLSFKDKIDNSNKPFVPIITSKPHAVQPLQDSLQLPAHISLEDTESPDFVYPHPYKEEV
EQWQPLPHQLERVEPQEVKPVDLTSAEFIDTAPDLAELCDLLKNETEIAVDLEHHSYRTF
QGFVCLMQVSTRTRDFLIDTLALRSDMSILNEVFTDPKITKVFHGADSDIDWLQRDFGLY
VVNMFDTGQAARVLNHARYSLAHLLQVYCQVDADKQFQLSDWRMRPLHEKMIRYAQEDTH
YLLHIYDRMRGELIDRGNEQKNLLHSVFQRSKNVCLKVFKKMRFTPDSHLDLYMKSKKVF
NSQQLQALKSIYSWRDSVARDEDESVHYVLPNHMLLQMAEILPRERQGVLACCNPIPPLV
RQCQHEVHSLIMEARETTLAPIEEKRSMEPSAAQHPHYHTSISTCRHDLSKQTSQSLDPG
ESSDGIRTKSNSSLFSTQSDIILKRKPILSALFPDSSVNARNKGTRLASKIRSHFCDPFS
KFLPDEARAEGNSVVKPPASAKGEMSWRLKASTGIAPGTKRKSDVDLNTFAPEFAPPAKS
KRAETVPESATATKPSASTETAATTTPTSSRQKVKGLKKKKKKVVEVEVEDEEEENPLSM
RQLMKKKKKEKKAKKIALASDSPQPSPQTEVLEPSPDVTQEKKKKKKKKVQLITESLTIE
PMEDEDDDDAEKKKKKKKKKQKVAEEGVMESVTPFDYSTADKSAFTGKGSQKQYPGVYNP
HFRGGDKKQNKQGKKKRVGQKHKKSMSFKPGAGGKK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactagagacgaagatgtggcctcttcttcaactgacaatgacaacaaaaac
gaaagtcccgaggaaatatttccgggatgttctagcattactgacttttcccagcaaatg
ctgcgaacagttgtgcaagcaaccaagacgtccaacgatttgccaacaggagatgattat
gactactactcaacctacaactctgttcgcaatgtcttagatctcgaagctggcaggatc
ttgcagttattgcagaatgtgatgcgtcaccagaatgtgaagggaacgatcacaggcacg
gaccatgctttggagctggatgagcaatttgacgtcatcattgatgccaacgatcagatc
ctggagagagtgggaacatgggtagatgaagccaccggggtgaggaagaatgagcacaag
ctggttgtgtcggccatgaatcgaccaaatcctgctgtggcaagctggaacaaaaagaaa
tctggcacaggcagtccgtctgccccggtgcagttactgaccgccagaaacatccagcgg
ccacagctcagcttcaaggataagattgacaacagcaacaagcctttcgtgcccatcatc
accagtaaacctcacgctgttcagcctctgcaagatagccttcagttacctgcccacatc
tctttggaagacacggagagtccagattttgtgtacccacacccgtacaaagaggaggtg
gagcagtggcagccattgccccatcagctagaaagggtcgagccgcaggaggtcaagcca
gttgacctcacatctgccgagttcattgacaccgcccctgaccttgctgaactctgtgac
cttttgaagaacgagacagaaattgcagtggatctggagcaccattcctaccggacattc
caagggtttgtgtgcctgatgcaagtatcaacacgcacgagagacttcctcatcgacacg
ctggccttgcgctccgacatgagcattcttaatgaagtcttcactgaccccaagatcaca
aaggtgtttcatggcgcagactcggacatagattggctgcagagagactttggcctgtac
gtggtcaacatgttcgacacgggtcaagcggccagggttctcaaccatgcccgctactcg
ttggctcacctgctgcaggtgtactgtcaggtggatgccgacaaacagttccagctctcc
gattggagaatgaggcctctgcatgaaaaaatgatccgctatgcccaagaggacacccac
tacctcctccacatctacgatcgcatgcgcggtgagctgattgaccgtggcaacgaacag
aagaacctgttgcactccgtgttccagcgcagcaagaacgtgtgcctgaaggtgttcaag
aagatgcgcttcacacctgacagtcacctggacctgtacatgaagagcaagaaggtgttc
aactctcagcaactacaggcgctgaaatccatttacagctggagggacagtgtggctcgg
gatgaggatgaaagcgtgcactatgttctcccaaaccacatgttgctccagatggccgaa
atactccccagggagcgacagggagtgttggcgtgttgcaaccccatccctcccctagtg
cggcagtgtcagcatgaagtacacagccttatcatggaggccagagaaactaccttggca
ccgattgaggagaaacgcagcatggaaccgtctgcggcacagcatcctcactaccacacc
tccatctccacttgccgccacgacctctccaagcaaacgtcacaatccttggaccctggc
gagagttcagatgggatccgcacaaagtccaacagttctctgttcagcacccagtcagac
atcatcctgaagagaaagcccatcctatctgcgctttttcctgacagtagcgtgaatgcc
agaaacaaagggacaagacttgcatccaaaataagaagccatttctgtgacccattttcc
aagttccttccagacgaagcaagagcagaaggtaacagtgtcgtgaagccgccagcaagt
gccaagggggagatgtcatggagactgaaggcaagtacaggaatagcacccggtaccaaa
cgcaaaagtgacgttgacctcaacacatttgctccggagtttgcaccacctgctaaatcc
aagcgtgctgagacagtaccagagtcagctaccgcaacaaagccctccgcttctacagaa
acagcagcaacgaccactccgaccagcagcagacagaaagtgaaaggactgaagaagaag
aagaagaaggtggtggaggtggaggtggaggatgaagaggaggagaatcctttgtctatg
cgacagttgatgaagaagaagaagaaagagaagaaggcaaagaagattgccttggcctca
gattccccacagcccagtccacaaacagaagttttggagccatcaccagacgtcacccag
gaaaagaagaagaagaaaaagaagaaggttcaactaatcactgaatcactgacaattgag
ccaatggaagacgaagatgatgacgatgcggaaaagaaaaagaagaagaagaaaaagaaa
cagaaagttgcggaggaaggggtgatggagagcgttacaccctttgactactctactgca
gataaatctgcattcacaggaaaaggctcacagaagcagtatccaggtgtctacaatcca
cacttccgtgggggggataagaagcaaaacaagcaggggaaaaagaagcgcgttggacag
aagcacaaaaagagcatgagcttcaaacccggggcaggtggaaagaaatga
DBGET
integrated database retrieval system
