Littorina saxatilis: 138978848
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Entry
138978848 CDS
T10665
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsax03037
]
138978848
Cilium and associated proteins [BR:
lsax03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138978848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
CCDC39
Motif
Other DBs
NCBI-GeneID:
138978848
NCBI-ProteinID:
XP_070207741
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All DBs
Position
LG10:complement(41642777..41763364)
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AA seq
2494 aa
AA seq
DB search
MESVRRKQTDDDGGEEELSPQQQQQQQGAERDDNGSPVDPVVVVPSPSDDGAGVVPPAED
EGDSVDGTDSGVGVVASTTSGSVVLVSRGVSDTGVSVSVTGGGGGDSVMSSGVTSPVEKQ
ETELTKEGEGGEGGSEGERGLEREGPELSAQEQSTDQDLPPRPPSPTPPEEENTQEELQE
TLRKTEHPEETGGDSEEENIGSVSDAETDHIRQREQDLESQLNYDATDNPSGPATPRDPF
AHRKSQKLSLTETDELLLNFEEGQSVLSDIFDEQNPLRFRLGGKEYTTSTPYSPRYLSAT
EKPRFSSRAYKHRTTPTASPRTTPLTPRDLVLQPPPPPPPPLTMASSTFSSSLSTSDVTV
KTSVGYYLDEEESRKLEDSVLRSDESYTVRGTDGSPEKIPARVRDIITKNLSGEDSLRYS
SSVMDSHSQGDVQEENRMLASELNRVEEMLSASRAERDELSIKYNALSERLETSLKGGSM
LGEDSTSKSLVQQNLELRRKLEEEHSGYKRKLQAYQDGQQRQAQLVQKLQAKVLQYKKKC
EDLEGDYADLKTEYHSVRMMQSSSDRLDSSESRLKRVEMDHAMDLETALIKLEEEQQRSA
SLAHVNGMLREQLDHANEVNQQLTSDIQKLTTDWQRAREELEAKESEWREEEKTFNEYFS
AEHGRLLSLWRAVVAFRRQFSEMKTATERDLANVRSDVTKAARSMHSSCLNLGANMRSAD
THGQVSLDRERSDRMSMESQLSNRSREVSELQARYDALSYEMGHRVSELTMLNEKLKIQL
EERDKSISTLQKNIGNLEGRVGAYEVPETDTARDAREETEAIHLALRNIAEAVINDADVT
RLDEDGVEEVIAVQRSISPYRPRSISPTGRQRSPAMRHRSPSPTRNRSRSPAFADATFSA
VQAALAKRQMQVSDLRAKLKGSRDQGGSLRKNLDDAENEKRRLEHVIMNLKEDVEVARRE
KDDSSRDRDRIKNALNVTGTEKSQLERVRQELNGQIEALHKENEKLQAANSEVQRHRDIL
EDEKEDIEKDKLRQVKENERCQKVIEQVEVKVSSLREELVSTKEALNRALLDKEVLEGQK
IEVGEALSKAEVSKAELEVEINKLKSEEACLRDALLKMQALNEGLGQDKIELNKIIMQVE
MEKSVLSEEKAALEQEKVGIRDDLVRAEQEKMDLDTEKHGLNQTLELSELTRQQLEEEIL
SFNRNKQEVTVQLSMVSRQKQALAEELLTSRRDLERAQMAHDRVFKEKESLNLEKGELVV
QVTATERENRQQSEQIAALQSDKDQLEGALYEAQQAVVQLEVRKAQLEGENQELIVRKEN
LQAEISRLEKEKAADQDRFEHQKDQLNARLMQLERDSQMALAQEKQAHEEDCERLTRERE
SQRNDYETNREQLLHSHAMEKEDAMSRYDKQMEDLQEELGRVQRDRDEALLLAENDRQQA
ISLLEQEKGTLLEKLANAQQDLADWSVKYDRLKLEAQARAESDRSTIIALQGELRDFRQQ
FEEATEAHEREVKAQNEQLREVARQREAALTEVDELKTQLKLVEETRDAIRRDLINANRT
IREGEETRDLMRKDVTDLKRAINEEIREKEAIGHTANELRNMVKTCEQEKTDLARCVQDA
RQRIGVLEEQKSGVVREAGDLRMNLREVEKARLEARRELQDLRRQVKMLDGERSKLGKEV
GDLQVRVARDEEKEEESRRTSFDLKQKVVETEASREALRKELANLQRKMAELIDDATMKE
KDYQLALDDSHRSERKLDDQRKNLEIALEGANADIGELRLRLSGAEGRVNALEMTLARLE
GSKKDVEFKLRSIVSSLRRSIGFRQEMPRGVRSRSPSPRRSRPNSPSKGFDNTFATTTEG
RGSPIPRTGSPIRSGSPLRSMSPHRSMSPGRVEGLDVDPEAVRAALRDFMTQLADAEREK
DDALATVRSMTTQLKDLDEERERTDNRLKLLQKTLGDAEEDKRGIDGRLTSAQTALMMQE
ETIRRNERERKVLSDKVTALERTVAAADSEKRQLQEKMAKLKTNEGKLEEDKKNLRVALD
DAETRCTKLELFRRQLDGELQRVRLAMTDKETENQVLQDRVETLTKQIQGLESKAQSLQI
TIDRMHGSLTKTEEEGHMSKDKVQALNMSLSDSNAMINELEERVTQTQRALKNSEQDRCV
LQERLDVTRQALNDAKKQNHTLMERLQAMQNEVSDSEVRCSELEGQIRQLNNLLVQRQEA
EQELSQRIQKTQAEKQGLVERVSSMSRTLGSMQTEKREVERSSVRLEKDKNALRKTLDKV
EREKLKTEEIATKTLYDRSSFDSGLRRLEEDNLELQRQIQQMQAQLAEAEQRHAQRLVDV
NTRHRAETEMETERLRSAQIQAEKLLEARERAHRQKIKGLEEQTHTLKDQLGQELRRRQH
YLTKSSRTDMEIRDIRSVLDTSLGNVSRDPNLDPLLLEHESRKLEESLEYTSVSRRRSPL
RTMSPGRMGGVATTTAFRPSRSPRSPILRRKLKQ
NT seq
7485 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgtacgaagaaagcaaaccgacgacgacgggggagaagaagaactgtcccca
caacaacaacaacaacagcagggggcggaaagagacgacaatgggagccccgtcgaccca
gtagtagtagttccctccccttccgacgacggagcaggagttgttccccctgcggaagac
gagggagacagtgtcgacgggacagacagcggagtaggtgtcgtcgcttccacgacctct
ggcagtgtcgtcttggtgtctcgtggtgtcagtgacaccggtgtgtcagtgtcagtgaca
ggcggcggtggtggtgacagtgtcatgtcctcgggtgtcacaagtcccgtcgagaaacaa
gaaacagaactgaccaaagaaggagaaggaggggaaggtggaagcgaaggggagcgaggc
ttggagcgcgaaggcccagaactctccgcacaagaacaatcgacagatcaggacctcccc
ccacgacccccctcacccaccccgcccgaggaagaaaacacccaggaagaactccaagag
acgctccggaaaacggaacaccccgaggagaccggcggcgactcggaagaggaaaacatc
ggcagcgttagcgacgccgagacagaccacatccgccagagagagcaggacttggagtct
cagctaaactacgacgccaccgacaacccatcagggcccgccactcccagggaccccttc
gcgcatcggaaatcccagaagctttcgttgaccgagactgatgagctcctgctgaatttc
gaggaggggcagtccgttctcagtgacattttcgacgagcagaaccccctcaggtttcgt
ttaggagggaaagagtacacgacatccaccccgtattctccccgctacctcagtgcaacc
gagaaacccaggttctcatctcgagcgtacaagcatcgcaccacacccactgcgtcaccg
cgaaccactcccctgacccccagagacctggttctacagcctcccccaccaccccctccg
ccgttgacaatggcgtcatccacgttttcgtcatccctgtccaccagtgacgtcacggtg
aagacgtcggtgggctattacctggatgaggaggagagcaggaaacttgaagactctgtg
ctgcgtagcgacgagtcatacactgtacgaggcacagacggaagcccggagaaaatcccc
gcccgtgtgcgcgacatcatcaccaagaacctatccggagaagatagccttaggtattct
tcttccgtcatggattcccactcgcagggagatgtccaagaggagaacagaatgctcgcg
tcagagctcaaccgtgtcgaggaaatgctgtcagcgtctcgagcggagcgtgacgagctg
agtatcaagtacaacgctttgagtgaacggctggagacaagcttgaaaggcggcagcatg
ctgggtgaagacagcacgtccaagtcgctggtgcagcagaacctagagctgcgtcgcaag
ctggaggaggagcacagcggctacaagcgcaagctgcaggcctaccaggacgggcagcag
agacaggctcagctcgtccagaaactccaggcaaaggtgctgcaatacaagaagaaatgc
gaagacttggagggggattacgctgatcttaagacagagtaccactctgtgcgaatgatg
caatcttcgagcgatcgcctggattcgtcggagagcagactgaagcgagtcgagatggac
cacgcaatggacctggagaccgctctcatcaagctggaagaagagcagcagaggagtgcc
agcctggcccacgttaatggcatgctgcgtgaacagctggaccacgccaacgaggtcaac
caacagctgacctccgacatccagaaactgaccaccgactggcagcgagcccgtgaggaa
ctcgaggccaaggagtctgagtggcgcgaggaggagaagacgttcaacgagtacttcagc
gcggagcacggtcgcctgctgagcttgtggcgtgccgtggtggccttcagacgtcagttc
tctgagatgaagacagccactgagcgcgaccttgctaacgtgcgatcagacgtgaccaag
gccgctcgcagcatgcactcttcttgtctcaacctcggtgccaacatgcgttctgctgat
acccacggacaggtgtccctggaccgtgagcgcagtgaccgtatgtcgatggagagtcag
ctcagcaatcgctcgcgcgaggtgtctgagctacaggcgaggtatgacgctctcagctac
gagatgggccacagggtgagcgagctgaccatgctgaacgagaaactgaagatccagctg
gaggagcgcgacaagagcatctccacgctgcagaagaacatcggcaacctggaaggtcgc
gtcggcgcctacgaggtcccggagaccgacacggcccgggatgctcgggaggagacggaa
gccatccatctcgctctccgcaacatcgccgaagctgtcatcaacgacgccgacgtgaca
cgcttggatgaagatggtgtggaggaggtgatcgcggtccagcgatccatctcgccctac
aggccgcggtccatctccccgactggtcgccagcgatcgcccgccatgcgccacaggtca
ccttcacccaccagaaataggtcaaggtcgccggcgtttgctgacgccactttctcggct
gtgcaggctgcccttgctaagcgccagatgcaggtgtctgacttgcgtgcgaagctgaag
gggtctcgcgaccagggaggctctctgcgtaagaacctggacgacgctgagaacgagaaa
cgtcgcctggagcacgtcatcatgaatctcaaggaggacgtggaagtggcacggcgcgaa
aaggacgactcgtcgcgggacagagaccgcatcaagaatgcactgaacgtgacggggacg
gagaagtcacagctggagcgggtgcggcaggagctgaacggccagatcgaggcgctgcac
aaggagaacgagaagctgcaggcagccaacagcgaggtccagcgccacagagacatcctg
gaggatgagaaggaggacatcgagaaggacaagctgcggcaggtcaaggagaacgagaga
tgccaaaaggtgatcgagcaggtagaggtcaaggtgtccagtctaagagaggagctggtc
agcaccaaggaggctctcaatagggcgctgctggacaaggaggtgctcgagggacagaag
attgaagtcggcgaggcactgtccaaggcagaggtatccaaggcggagctggaggtggag
atcaacaagctcaagtcagaggaagcctgcctgcgagacgctctcctcaagatgcaggcg
ctcaatgagggacttggtcaggataagatcgaactcaacaagatcatcatgcaggttgag
atggagaagtctgtgctgtcagaagagaaggcggcactggagcaggagaaggttggtatc
cgtgatgacctggtgcgtgctgagcaggagaagatggacctggacactgagaagcatggt
ttgaaccagacgttggaactgtctgagctgacccgccagcagcttgaggaagagatcctg
tcgttcaaccgtaacaagcaggaagtcaccgtccagctctccatggtgtctcgacagaag
caggcgctggcagaggagctgctgacgtcacgcagagacctggagcgcgcccagatggcc
cacgaccgtgtcttcaaggagaaggagagcctcaacctggagaagggagagcttgtcgtg
caggtgacggcgacggagagagaaaaccgtcagcagagcgagcagatcgcggcgctgcag
agcgacaaggaccagctggagggggcgctgtacgaggcgcagcaggccgtggtgcagcta
gaggtgcgcaaagctcagctggagggagagaaccaggaactcatcgtccgcaaggagaac
ctccaagcggagatcagccgcctggagaaggagaaggcggccgaccaggatcgcttcgag
caccagaaggaccagctcaacgctcgcctcatgcagctggagcgcgactcacagatggcg
ctcgcacaggagaaacaggctcacgaggaggattgcgagaggctcacacgagaaagggag
agccagcgcaatgactacgagacgaacagggagcagctgctgcactcgcacgccatggag
aaggaggacgccatgtcgcgctacgacaagcagatggaggatctgcaggaggagcttggc
cgcgtgcagcgagaccgggatgaggctctcctcctggccgagaacgaccgccagcaggcc
atctctctcctggagcaagagaagggaactctgctggagaaactggccaacgcccagcag
gaccttgccgactggagcgtcaagtacgaccgtctgaaattggaggctcaggccagggcc
gagtctgaccgtagcaccattatcgccctgcagggagagctcagagactttcgtcagcag
tttgaggaggccactgaggcccatgagcgcgaggtgaaggcgcagaacgaacagctgcgt
gaagtggctcggcagcgagaggccgcgctcactgaggtggacgagctgaagacacagctc
aaactggtggaggagacacgcgacgccatccgccgcgacctcatcaacgccaaccgcacc
attcgtgaaggtgaagaaacccgcgacctcatgcgcaaggacgtcacagacctgaagcga
gccatcaacgaggaaatccgcgagaaggaggccataggtcacaccgctaacgagctgagg
aacatggtcaagacgtgcgagcaggagaagaccgaccttgctcgctgcgtacaggacgct
aggcaacgcatcggagtgctggaggagcagaagtcgggagtagtgagggaagctggagat
ctccgcatgaacctccgggaggtggagaaagctcgcctggaggcccgccgcgagctgcaa
gacctccgtcgacaggtgaagatgctcgacggcgagcgctccaagctgggcaaagaggtc
ggcgaccttcaggtgcgagtggctcgcgacgaggagaaagaggaggagtccaggaggacg
tcctttgaccttaaacagaaggtggtggagacagaagcatcacgcgaggctcttcgcaag
gagctggccaacctgcagcgcaagatggcggagctgatcgacgacgccaccatgaaggag
aaggactaccagctggccctcgacgattctcaccgctccgagcgcaaactggacgaccag
cgcaagaacctcgagatcgctctggagggcgccaacgccgatatcggggagcttcgcctc
aggctgagcggggccgagggtcgcgtcaacgcccttgagatgaccctggcccggctggag
gggtcgaagaaggacgtggagttcaagctgaggagcatcgtgtccagtctgagacgcagc
atcgggttccgtcaggagatgccgcgcggtgtccggagtcgcagccccagtcctcgccga
tctcgccccaactccccgtctaaaggatttgacaacacgtttgccacaacaacggaaggc
cgtggcagtcccatcccccgcaccgggtctcccatccgatctggcagccccctgcgctcc
atgtcaccgcatcgcagcatgtcaccgggccgtgtggagggtctggatgtagatcccgag
gccgtgagggccgctctcagagacttcatgactcagctggccgatgctgagcgtgagaag
gacgacgccctggccacggtgcgcagcatgaccacacagctgaaggacctggacgaggag
agagaacgcaccgacaacaggctcaagctgctgcagaaaacactcggagacgcagaggaa
gacaagcgtggcatcgacggcaggctcaccagcgcccagacagccctgatgatgcaggag
gagacaatccgtcgcaacgagcgcgagcgtaaggttctgtctgacaaggttactgccctt
gaacgaaccgtcgccgctgctgactctgagaaacgacaactgcaggagaagatggccaag
ctgaagacgaacgagggcaagctggaggaggacaagaagaacctgcgtgttgcccttgac
gacgcggagacccgctgcaccaagctggagctgttccgacgccagctggacggagaactg
cagcgagtgcgtcttgccatgaccgacaaggagacggagaaccaggttctgcaagaccgt
gttgagacgctgaccaaacagatccagggtctggagtccaaggcccagtcactgcagatc
actattgaccgcatgcacggctctctgaccaagacagaggaggagggacacatgtccaag
gacaaggtgcaagcgctgaacatgtcgctgtccgacagcaacgcgatgatcaatgagctg
gaggagagggtgacacagacgcagcgagcgctcaagaacagcgagcaggacagatgtgtg
ctgcaggagagactcgacgtcaccagacaagcactgaacgacgccaagaagcagaaccac
acactgatggaacgcctgcaggccatgcagaacgaggtgtccgactctgaggtccgatgc
tctgagctggaggggcagatcagacagctcaacaacctgctggtacagaggcaggaggcg
gagcaggagctaagtcagcgaatccagaagacgcaggcggagaaacaggggctggtggag
cgcgtctcgtccatgtcgcgcacgctgggcagcatgcagacagagaaacgtgaggtggag
aggtcctccgtgcgcctggagaaagacaagaacgccctgcgcaaaacgctcgataaggtg
gagcgagagaagctgaagacggaggagatcgccaccaagacgctgtacgaccgcagcagt
tttgacagcggtctgcgtcgcctggaggaggacaacctggaactgcagcgacagatacag
cagatgcaggctcagttggcagaggccgagcagcgccacgcacagagactggtggatgtg
aacactcggcatcgtgcggagacagagatggagacggagagactgcgcagtgctcagatc
caggcggagaaacttctggaggccagagagcgtgctcacagacagaaaatcaaggggctg
gaggaacagacccacacactgaaggaccagctgggccaggagctgcgtcgtcgtcagcac
tacctgaccaagtcttcccgcactgacatggagatccgcgacatccgctccgtcctcgac
acgtccctgggtaatgtcagtcgcgaccccaaccttgaccccctcctgctggagcacgag
tcgcgaaagctggaggagagcctggagtacaccagcgtcagccgcaggcgttccccactc
cgcaccatgtctcctggccgtatggggggcgtggcgacaaccaccgccttccgtcccagc
cgcagcccacgtagtcccatcctgcgtcgcaagctcaaacaatag
DBGET
integrated database retrieval system