Littorina saxatilis: 138978877
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Entry
138978877 CDS
T10665
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138978877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138978877
03012 Translation factors [BR:
lsax03012
]
138978877
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138978877
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138978877
Translation factors [BR:
lsax03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138978877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
NPHP3_N
NACHT
AAA_19
ATPase
SrfA
AAA_16
Motif
Other DBs
NCBI-GeneID:
138978877
NCBI-ProteinID:
XP_070207785
LinkDB
All DBs
Position
LG10:43010482..43059724
Genome browser
AA seq
1235 aa
AA seq
DB search
MPKAERSYGKLFQHAQQHIMDRDDRRGGYRDDSGGGGEGGGWRGRRGRGGGGRGRGRGGG
RGGGRGGGRPFDQGGEEGEGGGRGRPPPGLKGREIGLWYAKRSKAKKEDQERQNRPTIAM
DQHRENNIRRLLNNIDQADNVPPQMLRDFDEKDNGEEDSWWDQKSSNSGGAAAHGRSTAA
VDNWEELSEDVEMAANRQPGCSTEHSSNRQNTHERSSQRAASGSRDDESFSSRRTDYRSE
QSYGRQKTHEGFSQKTDSGSRDNESFSSRRTDSRSEQTYSRPKTQEGYSQKKAGSTSRDD
ESHSSRRTDSRSGSSQPTGSGSRNDGSSTSQGLPRTPSSGALGSAEDDADMEEDVPQVAG
VLEYNRAHGEFIFLDDELGEGFTQDEGAGSVGLPGNSALDQRLSAQAEQRLTDKKFQKMF
DFRKKLPSYAKRHELVGLLRDNQVLVVSGETGCGKTTQVPQFILDDYIERGDGSQCHIIC
TQPRRISAVSVAERVASERCEKCGGDDTSVGYQIRLEVRQPRKQGSMLFCTTGIVIKFLE
GDPLLKRTTHVIIDEIHERDLQSDFLMIILKDLLPRRPDLKVILMSATLNAEMFSQYFNR
CPMINIPGFTYPVKEYLLEDVLEMTRYRPDPNAKRKPKRSFKRQDREKEQEEEWNYQAWL
RNLDGSYSRSTIEALRNFDFTKIDLDLVMALIQHIVSTKEDGALLVFVPGWEEISNLHKM
LQANPSFTAGRYKIIPLHSLMPTVNQREVFDRPPPGVRKIVIATNIAETSITIDDVVFVV
DCGKIKVKDYDPATNLTCLEPQWVSRANSKQRRGRAGRVQAGYCYHLYTGLKWLEMMDYL
PPEMLRTRLEELCLQIKLLKLGRIEPFVSKAMQPPSMEALHKAIVTLQELNALDGEENLL
PLGKHLARMPVDPHTGKMILFGAMFCCLNPILTVAASLSFKDAFVIPLGKEKEADKARKE
LAESSKSDHYVLIRAMELWERSLSRGADRQFCWDYFLSPSTLRMLKDMKKQLADLLHDLN
FVASKNPKDPQSNINSGDLGLVKAVLCAGLYPHVAKVASTPRPGDPPYKMVKLHTKNGKG
KVSVHPKSVNCRETHFESKWLVYYHMLKTTQVYVHDCTMVSPYPLLFFGGKISIIMDSGQ
ECISVDDWIVFRASRSTAQLVKDLRRQLDRLLEEKIVRPGVTNWNETEKEGALMRAIAEL
ISTEESPSNPAVWRPPGWQSWRMLRKVESSCRKLC
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggcggaacgaagttacggtaagctgttccagcacgcacagcaacacatcatg
gacagggatgaccggagaggcggttaccgtgacgacagtggtggaggaggggaaggtggg
gggtggagaggaaggagggggagaggaggcggaggtcgtggaagaggcagaggaggagga
agaggaggaggaagaggaggaggcagaccgtttgatcaaggaggagaggaaggagaggga
ggggggagaggaagacctcccccaggactgaaggggagagagatcggcctgtggtacgcc
aaacgctcaaaagccaagaaggaagatcaggaaagacagaatcgtccaacaatcgccatg
gatcaacatagagagaacaacatccgacgactcctcaacaatatcgaccaggccgataac
gtcccgccccaaatgctccgcgacttcgacgaaaaggacaacggggaggaagacagctgg
tgggatcagaaatcatcaaacagcggcggggctgcggctcatggaagaagtacagcggct
gtggacaactgggaggaattgtcggaagatgtggagatggctgcgaacagacagccgggc
tgtagcactgaacacagctccaacaggcaaaacactcacgaacggtcctctcaaagagcc
gcatcaggttctagggacgacgaatctttctcgagtcggcgaacagattatcgctctgaa
cagagctacggcagacaaaaaactcacgaaggattttctcagaaaactgattcaggttct
agggataacgaatctttctccagtcggcgtacagactctcgctctgaacagacctacagt
agaccaaagactcaggaaggatattctcagaaaaaagcaggttctacttctagggacgac
gaatctcactcaagtcggcgaacagactctcgctcagggtcctcacagccaaccgggtct
ggctctaggaatgacggatcttctacgagccagggactaccccgcactccctcgagcgga
gcgttagggagtgctgaagacgatgctgacatggaagaagatgtaccacaggtagcggga
gtgctggagtataaccgtgcccatggggaattcatctttcttgatgacgagctgggggaa
ggttttacacaagatgaaggtgcagggtcggtcggactgccgggcaacagtgcattggat
cagcgtctgtcagcacaagctgagcagagattgacggacaagaaattccagaagatgttt
gatttccgcaagaagcttccttcttatgccaagcgacatgaactggtagggctgcttcga
gacaaccaggttcttgttgtcagcggggagactggatgtggcaagacaacgcaggtaccc
cagtttatcctggacgactatatcgagagaggggatgggtcacagtgtcacatcatctgc
acccagccacgcagaatcagtgccgtctcggttgcagagagggtggcgtccgagcggtgt
gagaagtgcggaggtgacgacaccagcgtgggctaccagatcaggctggaagtacgccag
ccaaggaagcaggggtccatgctgttctgtaccacgggaatcgtcatcaagtttctggaa
ggagatccactgttgaagaggaccacacacgtcatcatagacgagatccacgagagagat
ttgcagtctgacttcctgatgatcatcctcaaggacctgttgccacgacgacccgacctc
aaggtcatcctcatgtcggccacgctcaacgctgagatgttctcacagtacttcaaccgg
tgcccgatgatcaacatacctggcttcacctaccctgtgaaagaatacctgttggaggat
gtactggaaatgacaaggtatcggccggaccccaacgccaagcggaaacccaagaggagt
ttcaaacgtcaggacagagagaaggagcaggaggaggagtggaactaccaggcctggctc
aggaatttagatgggagttactcacgatccaccatcgaagctctgaggaactttgacttc
accaagattgaccttgaccttgtcatggccttgatacaacacatcgtcagcaccaaagag
gacggtgctctactggtgtttgttcctggctgggaggagatcagcaatctgcacaagatg
ctgcaggctaacccctcatttaccgcagggagatacaagattatcccccttcactcactc
atgccgactgtcaaccagcgtgaagtgtttgatcgcccgccgccaggcgtgaggaaaatc
gtcatcgccaccaacatcgctgaaaccagtatcacgatcgacgacgtggtgtttgtggtg
gactgcggtaagatcaaggtcaaggactacgaccccgccaccaacctcacctgtctggaa
ccccagtgggtgtcacgtgccaactctaagcagcgtcggggcagagccggcagggtgcag
gcgggatactgctaccacctgtacacaggcctcaagtggctggagatgatggattacctc
ccccctgagatgctcagaactcgtctggaggagctctgtctgcagatcaagttgctgaag
cttggccgcatcgagccgtttgtcagcaaagccatgcagccgccctccatggaagctctg
cacaaagccatcgtcaccctgcaagagctgaacgccctggacggtgaggagaatctgtta
ccgctgggcaagcaccttgctcgcatgccggtcgacccccacacgggcaagatgattctg
ttcggcgccatgttctgctgtctcaaccccatcctcactgtggccgccagtctgtccttc
aaagacgcttttgtcatacctctgggcaaggagaaagaagcggataaagccaggaaagag
ttagcagagagcagcaagagtgaccactacgttctcatcagagccatggagttatgggag
aggagcttgtccaggggcgctgaccgacagttctgctgggactacttcttgtcaccaagc
acgctgcgtatgctgaaggacatgaagaaacagctggcggatctgctgcacgacctcaac
tttgtggccagcaagaaccctaaagacccacagtccaacatcaactctggtgacctgggc
ctggtgaaggcggtgctgtgtgcggggctctaccctcacgtggccaaggtggcctccaca
ccacgaccaggggaccccccctacaagatggtgaaactgcacacgaagaacggcaagggg
aaagtgtcagtccatcccaagtcggtcaactgcagggagacgcattttgagtcaaagtgg
cttgtctactatcacatgctgaagactacccaggtgtatgttcatgactgcacaatggtg
tcgccctatccgctgcttttcttcggaggcaagatcagcataatcatggactcgggtcaa
gaatgtatctcagtggacgactggattgtgttcagggcctctcgcagcactgcacaactc
gtcaaggatctgcgtcgtcaactggataggctgttggaagagaagatcgtgcggccaggt
gtgaccaactggaacgagacggagaaagaaggggcactgatgcgtgccattgctgagctc
atctcaacagaggagtcaccttcaaatcctgccgtctggcgacctcctgggtggcaaagc
tggaggatgttgagaaaggttgagtcatcctgtcgaaaactgtgctga
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