Littorina saxatilis: 138980074
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Entry
138980074 CDS
T10665
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
lsax Littorina saxatilis
Pathway
lsax02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138980074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsax02000
]
138980074
Transporters [BR:
lsax02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138980074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
138980074
NCBI-ProteinID:
XP_070208976
LinkDB
All DBs
Position
LG11:complement(24224893..24238642)
Genome browser
AA seq
1711 aa
AA seq
DB search
MAGFLRQVGVLLYKNFLLQKNQAVATIISLIIPVVTAVIILALGLLVGPVHTNNQDSYSP
WTWVRKTCGFSREHPGVAFTPGIIGFAPDTNLTNSLMSRVADFCPNATFRNGSASLLKGF
SDMESMLNFYHESKAMQLAVHFKGMDNKQQLPLQVSYDIRDTDATTGVVYRRRFSPLPNV
GNERASILANLQLLLTKAFIDEWGGKSSEFGMRYVEMPRPAFVHRPYHGIMQSFFALALV
LSLVPLVYHSTKKIVFEKEEKLKESFKMMGVSPGALWVSWFATIYVYLFVIMAVYTAMLA
IPFFPSGYTMFIFLQVSVFWVFALIYSAAVASYCLMMGTVLKKARYSGVLAGFLFLVTVL
LHFHLDIIYLTLTRRQKLASCLLFNQAMAFGVKMIVYFDVTNAGLSWSNFYKPLEFVDDL
SMLDVWVMLLVDTALHLLVTWYLDNVFPGDFGIPKPFHFFLTKSYWCGTQSPNCERIEGT
ECLNEKFFEPAPADLDTGIRTTRLCKDYGMDNVAVRDLSVEACEGQITVLLGHCGAGKTT
TMSMLTGFTAPTSGTATIRGMDICTDTALVRQSMGMCPQHNVFFTTLTVEQNLKFFALLK
GCPCKLIQSEVDQMLKEAGLHSKRKTSAGTLSRGEKRKMSVAIALIHGSKVVILDEPSSG
LGPAARRQLWHILKQQREGRTILLTTQSMDEADVLGDRIMIMAQGVVKCCGTPLFLKELY
GVGYHLAVVKTIDCDVSSVTNTICEMVPSAYFEKEDRSELSYLLPDNQSAKFPELLHQLE
KREQQLGIGKLVVTATTMEEVFLKVGERSDTDDTAETNTKAVALSEVGSFVGSSVSAAER
EWSGEMENSDCAARNKADANDESLDLLALSRGYSNLTGVGLKLSQLRGLLMKKAICSWRS
PVTSIVQILLPVIFTLSVLVCTESDMLRPFPEIEIPEPDSKPSVTLDMAPFSETIVPYIV
TKLAGESDLPKLYLSQFDDRHRPTEVKSLDQLNRLIKGTRFYDSVTKMIIGAAFETSEDS
SNLAAFALYNPEYYAKLIASAYVLNAVAKERVNASINIVPGVRPFPRREYEDLLDQNSAK
IKAISTRLRKNRGKDLTHVMVLLISIGMSFLAPTFVFSLMKEREVGSKHLQRVNSASPFL
FWFSNLLWDMFTCLPAFVVMLIVFKASDFQPYSEETRPILVFLLLLLYSWAMLPYNYAIH
FLMTSPWSCMVVLFFLHLLGGVAAPICFFLDGFGSYDVTGSTVRALCKLLSPGFNLVMAM
AQIPVTYMSVVECEVEHLNKVFCKRCCLDFKIACDGQCTELSGEYWKWDTPGVGKFLVFL
LLQGFVFFLLTVLIESRCYKRILLYLNARGLWRSHNVGGEGTTAEDNDVAEEKRRIKDTP
ATELCLQDSVLLKNLTKSYGSMIAVDNVCVGVGERECFGLLGQNGAGGSTIFKMLTGEEV
PTRGEAYVKGYSVVRQLREVRSNIGYCPQTDPLTDQMTCRETLTLYARLRGVPDYHIKDC
VNGFLDILALTPHASKLTKALRGGVKRTLTTALALIGDPPVILLDEPSTGLDSAARRRLW
GILSAVRAGGRTLVLTSRSVEECEALCTRVAIMGNGRLLCLGSVQRLKAKFAQGYTLVVR
MGLQEDGQPAPTGPLLTFVQQRFPSALVFDSDNLSLDLQVPDPSLSVADLFQAMERAKDE
FHVKAYSVHQTTLEQVFCALTAKQSASKCEG
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtttctgagacaagtcggggtgctgctgtacaaaaacttcctgcttcagaag
aaccaagcggtcgccactataatttcgttaataataccggtagtgacagcggtgattatc
cttgcactgggcttattggtaggaccagtccataccaacaatcaagatagttactcccct
tggacctgggttcgaaagacttgtggttttagcagagagcacccaggagtggctttcacg
ccaggcataataggtttcgcaccagacactaacctaaccaacagccttatgtccagagtc
gcggatttctgcccgaacgctacgttccgaaacgggtctgcgagtttactgaaggggttt
tccgacatggagtcaatgctgaacttctaccatgaaagcaaggccatgcagcttgctgtg
cattttaaagggatggacaacaaacagcagctccccctgcaggtcagctatgacatccgt
gacacggatgctactacaggagtcgtctaccgaagacgtttctcccctcttccaaacgtt
ggaaatgaacgagcctcaatcttggcaaaccttcagcttttactgactaaagcgtttatc
gatgaatggggcggtaagagcagcgaatttggaatgcgatatgttgagatgccgcgccct
gctttcgttcatcgcccgtatcacgggataatgcaatcattcttcgccttggctctggtc
ttatcactggttccccttgtctaccacagcaccaagaagatcgtcttcgagaaggaggag
aagctgaaagagagcttcaagatgatgggcgtatcacctggagccttgtgggtgtcgtgg
tttgcaaccatctacgtgtacctgttcgtcatcatggcggtgtacactgccatgctggca
atccccttttttccctctggttacacgatgttcattttcctccaggtctccgtcttctgg
gtcttcgcactgatctactcagcagccgtcgcctcttattgcctcatgatgggaactgtg
ctgaagaaagccaggtattcaggagtccttgcaggattcttgttcttggtcaccgtcttg
ctccacttccacctggatatcatctacttgactttgacaagacggcaaaaactggcctcc
tgcctccttttcaaccaggccatggcgtttggtgtgaaaatgatagtctactttgacgtt
accaacgcgggactgtcctggtccaacttctacaaaccgctggagtttgttgacgacctg
tccatgctggatgtgtgggtcatgctcctggtggacactgccctccacttgctggtcacg
tggtacttggacaacgtctttccaggggactttggcatccccaagcctttccactttttc
ctgaccaagtcctactggtgtggcacccagtctcccaactgcgagaggatagaaggaaca
gagtgtttgaacgagaagttctttgaacctgcccctgcagacctggacacaggcatcaga
acgactcgcctgtgtaaagactacggcatggacaacgtggcggtcagagacctgtccgtg
gaggcgtgcgaggggcagataactgtgctgctgggccactgtggggcagggaagacaacc
accatgtccatgctgaccggcttcaccgcccccacctccggaactgccaccatccgcggt
atggacatctgcacggacacggcgctcgtcaggcagagcatgggcatgtgtccacagcac
aacgttttcttcaccacactcaccgtggagcaaaacctcaagttcttcgccctgctcaag
ggctgcccttgcaaactcattcagtcagaggtggaccagatgctaaaggaggcggggcta
catagcaaaaggaagaccagtgccggcactttgtcgcgaggtgagaagaggaagatgtcc
gtagccattgctctgatacacgggtccaaggtggtcatcctggacgagccttcctccggc
ttgggcccagcagcgcggcgtcagttgtggcacatcttgaagcaacagcgtgaaggtcgc
accattctgctgaccacacagagcatggacgaggcggacgtgctgggagaccgtatcatg
atcatggcacagggcgtggtcaagtgctgcggtacgccgctctttctcaaggagctgtac
ggcgtgggctaccacctcgccgtcgtcaaaaccatcgactgtgacgtcagcagtgtgacc
aacacgatctgtgaaatggttccgagtgcttactttgagaaagaagatagatcggagcta
agctacctgctacctgacaaccagtcagccaaattcccggagctgttgcaccaacttgaa
aaacgcgagcagcagttgggtatcggcaaactcgtagtcacagcaacaaccatggaggaa
gtgtttctcaaggttggagagagatcagacactgacgacactgcagagaccaacaccaag
gccgtagctctgtctgaagttggaagctttgtgggcagctcagtatctgcagcagaaaga
gagtggtcaggcgaaatggaaaactccgactgtgctgcaaggaacaaagctgatgccaac
gacgagagtcttgacttgcttgctctgtcgcgaggctacagcaacctgacaggggtgggg
ctgaagctgtcacaactacgggggttgttgatgaagaaggccatctgctcttggcggagt
ccggtcactagcatcgtgcagatcctcctccctgtgatcttcacgctctctgtactggtc
tgtacagagtcggacatgcttcggccatttcctgagatcgagattcctgagccagattca
aagccctctgtgaccctcgatatggcgcctttttctgagaccatagttccctacatcgtg
acgaaacttgctggtgaaagtgatctcccgaagctctatctgtcccaatttgacgaccgc
cacagacccacagaagttaagagccttgaccagctgaacaggctgatcaaagggactaga
ttctatgattctgtcacgaagatgatcatcggcgctgctttcgagacctctgaagattcc
tcaaatctggctgcgtttgcgctgtacaaccctgagtattacgccaaactgatcgcaagt
gcttacgtcctcaatgcagttgcaaaggagcgcgtcaacgctagcattaacattgtccct
ggagttcgaccatttccacgcagagaatacgaagatctacttgatcaaaatagtgctaag
attaaagctataagtactagactcaggaagaatcgcggcaaagatttgactcacgtgatg
gttttgcttatatcgattggaatgagcttccttgcccctactttcgtgttctctctgatg
aaagagcgagaggtaggatcgaaacaccttcagcgagttaacagcgcgagccctttcttg
ttctggttcagtaacctgctgtgggatatgttcacctgcctgccagcctttgtggtcatg
ctaatcgtgtttaaggcgagtgatttccagccctactcggaggagacacgaccgattctt
gtcttcctgctgctgctcctctacagctgggcaatgctcccttacaattacgctattcac
ttccttatgacatccccctggagctgcatggttgtgctcttcttcctgcaccttctgggc
ggtgtcgctgcgcctatttgcttcttccttgacggctttggctcgtatgacgtcacgggg
tccacagtacgggcgctgtgcaaactactgtccccggggttcaatctagtgatggctatg
gcgcagatacccgtgacttacatgagcgtggtagagtgtgaggttgagcatctgaataag
gtattttgcaagagatgctgtttagacttcaaaatcgcttgtgacggacaatgcaccgag
ttgtcaggagagtactggaagtgggacacacccggcgtgggcaagttcctggtgtttctg
ctgctccaaggttttgtcttctttctcctcactgtcctgatcgagtcgagatgctacaaa
cggatcttgctgtacctcaacgcccgtggtttgtggcgtagtcacaacgtcggcggggaa
ggcacgacggcggaggacaacgacgtggccgaggagaaacggaggatcaaagacacgccg
gccacagagctttgcttgcaggactctgtgctactgaagaacctgaccaagagctatgga
tccatgatagctgtggacaatgtctgtgtgggagtcggggagcgggagtgcttcggtctg
ctgggacagaacggagcgggagggagcaccatcttcaagatgctgaccggggaggaggtc
cccacccgcggcgaggcttacgtcaagggctacagcgtggtgcgacagctgcgggaggtg
cggtccaacattggctactgcccgcagactgaccctctcactgaccagatgacctgcagg
gagacgctcacgctctacgctaggctacggggcgtgcctgattatcacatcaaagactgc
gtcaacggcttcctggacatcctggcgctgacaccacatgccagcaaactaaccaaagcc
cttagaggcggagtgaagcgcacgctgaccactgcattggccctcatcggtgaccctccc
gtcatcttgctggacgagccgtccactgggctagactccgctgcccggagacgtctgtgg
ggcattctgtcggccgtcagggctgggggaaggactctggtgcttacttcacgcagtgtg
gaggagtgtgaagcgctgtgcacacgtgttgccatcatgggcaacgggagactcctgtgt
ctgggcagcgtccagcgcctcaaggccaagttcgctcagggctacacgctggtggtcagg
atggggcttcaggaggacggtcagcctgcacccaccggtcccctcttaaccttcgtccag
cagcgctttccctcggccctcgtcttcgattccgacaacctctctcttgacctgcaggtg
ccggacccctcgttgtccgtggctgacctttttcaggccatggaaagagccaaagatgag
tttcacgtgaaggcgtacagcgtgcatcagaccactctggaacaagtcttctgcgccctc
actgccaagcaatctgcatcgaaatgtgaaggctag
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integrated database retrieval system
