Littorina saxatilis: 138980116
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Entry
138980116 CDS
T10665
Name
(RefSeq) nucleoporin NUP42-like
KO
K14321
nucleoporin-like protein 2
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138980116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138980116
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138980116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
138980116
NCBI-ProteinID:
XP_070209030
LinkDB
All DBs
Position
LG11:complement(25799498..25817586)
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AA seq
507 aa
AA seq
DB search
MAVCRFFLEGRCKYGDRCFNEHPRGNGPAGGGGGGRGVTFRDSFGTSNQQSQNQYRWTAT
AQPQQQQQPQQQQSQPASSISVQDIIKSLPKEMEVWQTSKMWPFSCFSIEKDIPSLPDFV
DMSPEELRLDGYTAIAQGTVDAYKQKVMQLMQEYGRKQEQIKNMTPALRQKLMELLEEGR
RQKAAKASGQALVRPSTFGAQSGGVQSGGGGGVFGSSGGSGSMFGNSPAAVPASSSSVFG
SSTTANAGSIFGNSGAANTGSVFGSSPAQGSAFGMSGAPATQASSGFGQSSVFGGAQPAS
GATSFGQMQPAPGLFGKPAAAGGAAPTSSVGGGGMFGQNSGSPGLFSQPAGTPGANPPAG
LFGKPATPGGLFGQPAGAVGGFGQGAGTGSVFGQPPASSGGSLFGQPTTASAAPAPGLFG
SSPSQSSVFGASGAAVQPTQGLFGKGGPGPGGSVFGAAATPPQTANDSSLYTPLADLTEQ
EKQQFQAQTFTLGLIPMRPPPRELINM
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtgtcgattctttctggagggccggtgtaaatacggcgacagatgcttcaac
gaacatcctagagggaatggcccagcaggaggagggggtggagggagaggagtgacgttc
agagacagttttggcacctccaaccagcagagccagaaccaatacagatggaccgccacc
gcacagccgcagcaacaacaacaaccacagcaacaacaatcacagccagccagcagcatc
tctgttcaggacattatcaagagcttacccaaggagatggaggtgtggcagacaagcaag
atgtggccgttctcctgcttctccatagagaaggacatcccgtctttgccagattttgtg
gacatgagccccgaggagctgagactggatgggtacaccgccattgcccaggggactgtg
gacgcttataaacagaaagtgatgcagctaatgcaagagtatgggaggaagcaggaacag
atcaagaacatgacaccagcgctgcgtcaaaaactgatggaattgctggaagaaggaagg
cgacagaaagcagcaaaagcgtctggacaggcattggtcaggccttccacatttggggct
cagtctggaggggttcagtctggaggtggaggcggtgtctttggatccagcggtggatcc
ggttcaatgttcggcaatagccctgctgcagtcccagcatcctcttcatccgtcttcggt
agcagcaccaccgccaacgcaggatccattttcggcaacagtggagctgctaacacaggt
tctgttttcggaagcagcccggctcaagggtcagcatttggaatgagtggagcacctgca
actcaagcatcgtcaggctttggacagtcgtcagtgtttggcggtgctcagcctgcgagc
ggggcaacatcgttcggacagatgcaacctgccccaggacttttcggaaaacccgccgct
gctggtggtgctgccccaacgagcagtgtgggaggcggcggtatgtttggccaaaactct
ggctccccaggactattctcacagcctgctggcacacccggtgccaaccctcctgcaggc
ttgttcggcaaacctgccaccccgggggggctgtttggacaacccgcgggagctgtggga
gggttcggacagggtgcgggtacagggagcgtttttggtcagccacctgcctcttccggc
ggttcattgtttggtcaaccgacgacggcaagtgctgcccctgcgccaggtctttttggt
tcgagtccttcacaatctagcgtcttcggagcaagcggtgcagcggttcagcccacacag
gggctgtttggaaaagggggccctggtccgggtggttctgtgttcggtgctgcagctacg
ccgcctcagaccgccaacgacagttctctgtacacccccctggcggacttaaccgaacag
gaaaaacaacagtttcaggcacagacattcaccttaggtttgattcccatgcgcccgccg
cctcgggagcttattaacatgtag
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