Littorina saxatilis: 138980428
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Entry
138980428 CDS
T10665
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
lsax Littorina saxatilis
Pathway
lsax03030
DNA replication
lsax03410
Base excision repair
lsax03420
Nucleotide excision repair
lsax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138980428
03410 Base excision repair
138980428
03420 Nucleotide excision repair
138980428
03430 Mismatch repair
138980428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsax03032
]
138980428
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138980428
DNA replication proteins [BR:
lsax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138980428
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138980428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_22
AAA_30
BRCT_2
AAA_16
PTCB-BRCT
nSTAND3
AAA_14
RuvB_N
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
138980428
NCBI-ProteinID:
XP_070209410
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All DBs
Position
LG11:complement(38905943..38974974)
Genome browser
AA seq
1243 aa
AA seq
DB search
MDIRKFFGPPTSKKPTDTKQSAPAIPKTPSANPKTQSTKQKTPKSHEKASKQKSTPSAFL
QKSKQSKQSDEDFEIIADSDEEETTKKKVNGNSKGKEHSSSSQHKKESSATVQAKKDNGA
AKQNRSESKERKKNGKDKKASKDIDSDSEIFEEERNKKGSGKTRSKKQQVISDSDGDDES
PIKIKRTGKGKRQPQVISDSEEELIISEDKKSSKSSKRKKKESDEEPQSKRKGQRLMDSD
SDAEDPIPKKKGRKGKKEAVVVDDSDEDKTPKKGSLDAFVIHNAPAASKEPEPKKEPREK
KKCVSAVDFFGGGTVQRTERTTAVSKRKVAETVDPEFHDDDDFSKTLEQLDKQHAKKSRT
DSSPVKETVKEEGGLASSLASKLATKMKSDSPVAASPAKHDTNSNIVPDTPDFRKTPRKG
RSGGTPSATPEKKTNADNMEVDKETDKPVPSVAEKKTPLKTVEKKTPAKSTEKKTPPNSA
QKEESGKGSAKRNWGAYRSFLNREGPAAPGSKEIPTGAENCLEGLTFVITGVLDSLERDE
AKSLVERYGGRVTTSISNRTSYLVIGRDAGASKITKAEQCKTKQVDEDGLLDLIRTLPGK
KSKYQEQAEQAAKKEQSLKKSTSSLSSQFTALKASQSRSQVDSKTSATLDSGTATSAKSE
TGSGDATLMWVDKHKPTSLKQIIGQQGDKSNAKKLLQWLQRWHKNRAAGVKPSGRFYGQD
DGSGHRAALLSGPPGIGKTTTAVLVCKDAGFSTVELNASDTRSKRSLKEDVAEALGNQTM
VDYMGSHQGPVTGHSHCLIMDEVDGMAGNEDRGGLQELVQLIKNTKIPIITICNDRNSMK
MRTLANHCFDLRFQRPRLEQIKGALMSIVFKEGLKVSPPALQEIILSSNQDIRQCIHNLS
MFTADRKELTYDQAKLDSKKAEKDLRLGIFDVARKIFAGGEETARMTIHDKSDLFFQDYS
FVPLFVHENYINVTPYAAKGDRKKHLSLLARTAESICDGDLVDKQVRGKGSWSLLPMQAM
NASVIPGEYMRGAMSGMITFPQWLGKNSSTNKNDRILQELRGHMALQVSCDKRGLNMDYL
PALRSRLTEPLAKLGSEGVPKVIELMDNYDIIKDDYDNILEITKWPNSKDPLAHLDSKTK
AAFTRQYNKETHLTPYATGAVAKKKRGGAGAEEDLGTEEGEEGQVAPPADDSEDEDTLDK
DTMIKASKNPSKAQAASSKGKAPAKGKGDSGKGKGQGKGKGRR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgaaagttctttgggcctccaacttccaagaaaccaacagacacaaagcag
tcggcaccagcaatacccaagaccccatcagcaaatcctaaaacccagtcgacaaagcag
aaaactcctaagagccatgagaaggcatccaaacagaaaagcacaccctcagctttcttg
cagaagagcaagcaaagcaaacaatcagacgaagattttgaaataattgctgactcagat
gaagaagaaacgaccaagaaaaaagtgaatgggaacagtaaaggcaaggaacactcttcc
tcgtctcaacacaagaaggaaagcagtgcaactgttcaagctaaaaaggacaatggtgca
gccaagcagaaccggtccgaatctaaagagcggaagaaaaacggaaaagacaaaaaagca
agcaaagacatagactctgatagcgagatattcgaggaggaaagaaataagaagggtagt
ggtaaaactaggagcaagaagcagcaggtgatcagtgattctgacggggacgacgagagc
ccaatcaagatcaagagaacggggaaaggcaaacgccagccacaggtcatcagcgattct
gaagaagagctgatcataagcgaggacaagaaatcttctaagtcttcaaagcgcaagaaa
aaggaatcagatgaggagcctcaatcaaagagaaagggacagaggcttatggattctgat
tccgatgccgaggacccaatacccaagaagaaaggaagaaaagggaagaaagaggctgtc
gttgtggatgattcagatgaggacaagacacccaagaagggaagtttggacgcctttgtc
atccacaatgcaccagcagcgagcaaggagccagagccaaagaaagagccgcgggagaag
aagaagtgtgtgagcgctgtggatttctttggtgggggaacggttcagaggactgaaaga
accactgcagtcagcaagagaaaagtggcggagacggtggaccccgagttccatgatgac
gatgacttcagcaagaccttggaacagctggataaacagcatgccaagaagtccaggaca
gattcttcaccggtgaaagaaacggtgaaagaagagggagggcttgcttccagcctggcc
agtaagctggccaccaagatgaaaagtgacagcccagtggcggcgtctccagccaagcat
gacaccaacagcaacattgtgcccgacacgcctgacttcagaaagacccccaggaaagga
agaagtggagggacaccctcagccacacccgagaaaaaaaccaacgccgacaacatggaa
gttgacaaggagacggacaaaccagtgccgtctgttgctgagaagaaaactcctttgaaa
actgtggaaaagaagactccggcaaaatctacagagaaaaagacaccaccgaactctgca
caaaaggaggagtctgggaaaggttcggccaagagaaactggggagcgtatcgaagtttc
ctgaaccgagaggggccggcagcgcctggttccaaggaaataccaactggtgcagaaaac
tgcctggagggcctgacgttcgtcatcacgggagttctggactcgctggagcgagacgag
gccaagagtttggtggagcggtacggggggagggtcacgacctccatcagcaatcgcacc
agttatcttgtcataggccgagatgcaggagcttccaaaattaccaaggcggagcagtgt
aaaaccaagcaggttgacgaggacggattgctggatctgatccgaacactgcccggcaag
aagtccaagtaccaggagcaggcagaacaagcggcgaaaaaggagcagtccctgaagaag
tccaccagctccctcagttctcagttcacggctctcaaggcgtcccagtccagatcgcag
gttgacagcaaaacgtcagctacgttggattctggtaccgccacttcggccaagagtgaa
acaggcagcggtgacgctaccctcatgtgggtcgacaaacacaaacctacctcattgaaa
cagatcatcggtcagcaaggagacaagagcaatgccaagaagttgttacagtggctccaa
cgatggcataagaatcgggcagctggcgtcaaaccatctggtcgtttttacggtcaagat
gatgggtctggccaccgagcagctcttctgtccggtcccccgggtataggtaaaaccacc
actgctgtgctcgtgtgcaaggatgcagggttctctacagtggagctgaacgcgtcagac
acgcggtcgaagcgaagtctgaaggaggacgtggcggaagccctcggcaaccagaccatg
gtcgactacatgggcagccaccagggcccagtgacaggccacagccactgtctgatcatg
gacgaggtggacggcatggcgggcaatgaggatcgcgggggactgcaggagttggtgcag
ctcatcaagaacaccaagattcccatcatcaccatctgcaacgaccgcaactccatgaag
atgcgcaccctcgccaaccactgcttcgacctccgcttccagcgaccgcgcctcgagcag
attaagggagctctgatgtcgatcgtgttcaaggagggcctgaaggtgtcgccaccagca
ctgcaggagatcatcctgtcttccaaccaggacatcagacagtgtatccacaacctgtcg
atgttcacggcggacaggaaggagctgacatacgaccaggccaagctggactccaagaaa
gccgagaaagatctcaggctgggtatattcgacgtggcgaggaagatctttgcgggcgga
gaggagaccgcgagaatgacgatccacgacaagtccgacctcttcttccaggactacagc
tttgtgccgctcttcgtgcatgaaaactacatcaatgtcactccctacgctgccaagggg
gatcgcaagaaacacctgtcgttactggccaggacagcagagagtatctgtgacggagat
ctggtggataaacaggtgcgcggcaagggaagctggagtctcctccctatgcaggcgatg
aacgcgagcgtgataccgggggagtacatgcgaggggccatgtcgggcatgatcacgttc
ccacagtggttgggcaagaactcctccaccaacaagaacgacagaattctgcaggaactc
cgaggtcacatggctctacaagtgtcgtgtgacaagcgtggtctcaacatggactacctg
cctgcactgcggtcacgcctgaccgagcccctcgccaagctggggtcagagggcgtgccc
aaggtcattgagctgatggacaactatgacatcatcaaagacgactacgacaacattctg
gagattacaaaatggccgaatagcaaggaccccctggctcatcttgactctaagacgaag
gcagcgttcacccggcagtacaacaaggagactcacctgacgccctacgccacgggggcc
gtcgccaagaagaagcgaggaggggctggagcagaagaggatttgggaacggaggaggga
gaggaaggacaagtggcgccacctgctgacgacagcgaggacgaggacaccttggacaaa
gacaccatgataaaggccagcaaaaatcccagcaaggcccaggctgccagttccaaaggc
aaggctccagccaagggcaaaggggactccggcaagggcaaaggtcaaggaaaaggcaaa
ggtcgaaggtga
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integrated database retrieval system
