KEGG   Littorina saxatilis: 138981019
Entry
138981019         CDS       T10665                                 
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
lsax  Littorina saxatilis
Pathway
lsax03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lsax00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138981019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsax03019]
    138981019
Enzymes [BR:lsax01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     138981019
Messenger RNA biogenesis [BR:lsax03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     138981019
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N ATP_bind_1 MMR_HSR1 CbiA AAA_16 TniB nSTAND3 AAA_22 AAA_29 AAA_18
Other DBs
NCBI-GeneID: 138981019
NCBI-ProteinID: XP_070209911
LinkDB
Position
LG12:complement(1120560..1138124)
AA seq 422 aa
MADENVKDGEDYRLDRNAELRFEVDSRNEVQMELVEGMAEVFGTELAKKQICAFLPGSKV
AVYTYHGCVVKLRGKTEVAYISKETPMTMYLNTHAAMEQMRQKADIEETRGPRVLVVGPT
DVGKSTLCRLLVNYAVRSGRSPMLVDLDVGQGQISVPGTLAAVVMERVADVEEGFVKTAP
LVFHFGHKSPADNMTLFNTLMSRMAEVINIRSEQSQRVNSSGVVINTGGWVRGSGYDVLK
HAAGSFEVDVILVLDQERLYNQLKGDLPEFVKIVLLPKSGGVVERSQHARAEARDMKIRE
YFYGVKGNFFPHTFEVKFSEVKLYKIGAPSLPESCLPLGMKASDSKTKVIPVLPTMTLLH
HVLSVSASDSGDQNIVETNVLGFIIVTGIDMDKAVMTVLSPSPRPLPKSILLVMDIQFMD
IK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcagacgaaaacgtgaaagatggggaagactaccgcctagacaggaacgcagagctg
cgttttgaggtcgattctcgcaatgaagtacagatggagcttgtggaaggaatggcagag
gtgtttggcacagagctagccaaaaaacaaatctgcgctttccttcctggatccaaagtg
gccgtctacacctatcatggctgtgttgtcaaacttcgtggcaagacagaggtggcctac
atctccaaagaaacaccgatgaccatgtacctcaacacgcatgcagccatggaacagatg
cgacagaaggcggacattgaggagacgagagggcctcgggtgctggtggtggggccgaca
gacgtgggcaagagcacattatgcaggctgctggtcaactatgccgtgcggtctggccgg
tcccctatgctggtggatctggacgttggacagggtcagatcagtgtacctggtacactg
gcagcggtcgtgatggaacgtgtggcagatgtggaagaaggctttgtcaagacagctccc
ctggttttccacttcggccacaagagtcctgctgacaacatgacgctgtttaacactctt
atgtcacgcatggctgaggtcatcaacattcgcagtgagcagagtcagagggtgaactcg
agcggcgtggtgatcaacactgggggatgggtgcgtggatcggggtacgacgtactgaag
catgcggccggctcctttgaggtggatgtcatcttggttctggaccaggagcggctgtac
aaccagctgaagggtgacctgccggaattcgtcaagattgtcctgctgccaaagtcaggc
ggggtggtggagcgttcccagcatgccagagcggaggccagggacatgaagatacgagaa
tatttttatggtgtcaagggcaacttcttcccccacacctttgaggtcaagttcagtgag
gtcaaactctacaagattggtgctccatccctgcccgagtcatgtcttccgctgggaatg
aaagcatcagacagcaagacaaaggttattcctgtgctgcccactatgaccctgcttcac
catgtgttgagtgtcagtgcgtcagattcgggtgaccagaatattgtggaaaccaacgtg
ctgggctttatcattgtaacgggaatcgacatggacaaggcagtgatgacagttctgtcc
ccttcgccaaggcctctgcccaagtccatcttgttggtcatggatattcagtttatggac
atcaaatga

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