Littorina saxatilis: 138981053
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Entry
138981053 CDS
T10665
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsax03016
]
138981053
Enzymes [BR:
lsax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
138981053
Transfer RNA biogenesis [BR:
lsax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138981053
Prokaryotic type
138981053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
138981053
NCBI-ProteinID:
XP_070209957
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All DBs
Position
LG12:complement(2535588..2564566)
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AA seq
498 aa
AA seq
DB search
MLRRVLSVVVGKLKRYTMAETTTQLAANDVTGEKRLLEEKVTDGAAVKKAKFEAAAPMQG
RADRKRKVALLLAYCGAGYYGIQIQKNGNFKTIESELIKALLAAGLITEEHSETPSKMSF
QRAARTDKNVSAVGNVISLKMLYEDAVEEKINAQLPPEIRVITCMRTTRGFDSKNHCTAR
TYRYMLPTYSFAPVEKFITKDYRVPAGIIEKVNEVLKKFVGTRNFHNFTSGRKPNDPSSK
RYIISFECGEPFVRDGIEFAVVTIKGQSFMLHHIRKMMGLMISIVRGYCGDEALVKSWGP
LKVDIPKAPGTGLFLQELEFAGYNKKFGTDGMHVPLVWDKYQETLDQFKEEHVLKHIAKA
EATESVMFQWLATLQYHKFDIIDLKQDMPPDGEKEKDPNWWRTKRLLNQLDKEKQASAAA
AEGSITEGSITEESSADADSKTQTGNAGATETTAETKSDQAAEGKADDQTPCQTNLPEDS
EAKELPEKEEAGKEAAAS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggagagtcctgtctgttgtggttggaaaactaaagcgatacacaatggcagaa
acaaccacacaacttgcagctaatgacgtgactggagagaaaaggttgctagaggagaag
gtaactgatggagcagctgtaaaaaaggcaaagtttgaggctgctgccccaatgcagggt
cgggccgacaggaagcgcaaagttgccctgctgctggcctactgtggtgcagggtactat
ggaatacagattcaaaaaaacggcaacttcaagaccattgagagtgagctgatcaaagca
cttctggctgctggactcataacagaggaacattctgagacaccttccaagatgtcattt
cagagggctgctcgcacagacaaaaatgtttctgctgttggcaatgtcatttccctcaag
atgttgtatgaagatgcagttgaggagaagatcaacgcacaactgccaccagagattagg
gtcatcacttgtatgcgcacgacccgagggtttgacagcaagaatcattgtacagctcgt
acctacagatacatgctacctacctactcctttgctcctgttgaaaagtttatcacaaaa
gactacagagtgccagctggcattattgaaaaggtcaatgaagtcctgaaaaagtttgtg
ggcactcgcaactttcacaacttcacttcaggaagaaagccaaatgatccaagttccaag
aggtacatcatttcatttgagtgtggagagccgtttgtcagggacggtatagaatttgct
gtggtgacaatcaaagggcagagtttcatgctgcatcacatcagaaagatgatgggcctg
atgatttccattgtgcgtggctactgcggcgacgaggcgttggtcaagtcatggggacca
ctgaaggtggacattccgaaagcccctggtactggcctgtttttgcaagagctggaattt
gcaggctacaataagaaatttggcacagacggcatgcacgtacctcttgtctgggacaaa
tatcaggaaactttggaccagttcaaggaggagcatgtcttgaaacacatcgccaaggct
gaagcaacagagagcgtcatgttccagtggctggccactttgcagtaccataagtttgac
atcattgatctcaagcaagacatgcctcccgatggagagaaggagaaagaccccaactgg
tggagaaccaaacgcctactcaaccaactcgacaaagaaaagcaagcttcagcagcagct
gctgaaggcagcattactgaaggcagcattactgaagaaagcagcgctgatgcagattcc
aaaacacagacgggtaatgctggtgcgacagagacaaccgcagaaacaaagtctgaccaa
gctgctgaggggaaagctgatgaccagacaccatgccagacaaacttgcctgaggattca
gaagctaaggaactgccagaaaaggaggaagctggaaaggaggcagcagcatcttag
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