Littorina saxatilis: 138981121
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Entry
138981121 CDS
T10665
Name
(RefSeq) huntingtin-like isoform X1
KO
K04533
huntingtin
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138981121
04131 Membrane trafficking [BR:
lsax04131
]
138981121
03029 Mitochondrial biogenesis [BR:
lsax03029
]
138981121
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138981121
Membrane trafficking [BR:
lsax04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138981121
Mitochondrial biogenesis [BR:
lsax03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138981121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
138981121
NCBI-ProteinID:
XP_070210060
LinkDB
All DBs
Position
LG12:complement(5318466..5389641)
Genome browser
AA seq
3018 aa
AA seq
DB search
MATIEKLVKAFEGLKVFQPGGAGTEDSSKKKEQPPSKKDKILHCNAVADCICAPNMRTIA
DFPKFLGIAVEAFLTLCDDTEADVRMVSDECLNRTIKTLLETNLGRLQVELYKEIKKNGS
SRSLRAALWRFADMCHLIRPQKCRPYIVNLLPYIARICRREEETVQETLSNSMPKICSAL
MGFANDSEVKALLKSFLTNLMSPSAVCRRMAASSLSLICQYSRSPINFFTYLITVILELV
TPVDKEHDVYTILGVILCFRHVMPHLAQSHNARSQGLKDSFGFREMEKEEGVSTEQLLKI
LQLLLYHTAHPDHNVVVASLDALQQMLKHPHPALLRVLMTKGGVTRTYIYQADFMDADLR
AESSTDLPNMSDDTGLDEDLDSSEVGSRPDTVSSSDTSAFASDFDAASDVGDTQSAQTVP
ASQAAAEVEDTDLLDTAVMLTSDNDYSNVEIGDLNEERSEMSTLSHSSSAETLLSIKSIS
PKRQPPSNSDGSQGHIQHDMNGNPEYDQIEREETSETSEVQEAPTATNSQAQKENENVLD
IGSLLDEKEMPLLYMLRVICRTFLLKGEEGQLVHDRHVRVSLKSVALACVASIFSLCPRL
SLGKLVPSDESSQDLSDVLLYASHPDHQLKGLTALMVGALIRAVLVEGRGDFNYWFHLQD
GQENDAITIEHLLKTLVGILDDDSAVATRHSLSALQQCLPQLLDSCHGRLGLQLLLDLIK
VKSNPYWLVKVELLDILGALNFKKISYLESISEDIQQGDHHFQGRIQLQQHYVRKVIIPL
LGDEDGRVRNASASSLIRLIPNLFFSVDNPQHDAVIAAAKDESDILLYPIMHEFSMEAPP
LVQGLVPPYHFNVLQEVVPAVESSLSRIVQMLMHQLLVSQSRSLTSGCCRALCRLSERFL
VTPYASAWGCGPAKQMTTRDSSGRVNVKRPPSRSLSSSSSLSLEELTAGIGGGPLQVILS
LMLFTQATLDLSTHQDMLQFAGNLIAGSAYKSLRSADEMASMAGAGEENKWAAVMDRMLV
PSIEHLLTHVARILNACTHVIDETVPGPPQVKPSLPSLPNAPSLSPVKRKVKGTEKEPSS
PLATAQGADSKTPQKTPSKEPKDSEKEKNKKEGIGTFYNLPQYVKLYEVLRGAYSNYKIS
LDLSSTDKFCSFVRTALDVMAQLLEIATLFDIGKHADEILSYFKSTVVLEPTSTVLCVQQ
LLKALFGTNLASQWECEQQNAGVVRPAKATRLSSSGKPGLYHNCLGQPYAHLTHSLLNAT
YKAATQMDTEDPNSSLMWLKKRVERKVPAILKPSSKVDKSVIGSYIRLFEPLVIKALKQY
TVTSCLELQRQVLDLLTQLIQLRVNYCLLDSDMIFISFVLKQFELIEEGQIRNSEVLVPH
IFQFLVMLSYEKYHSKPIIDMPRIIHRCDGIMASGMRPDTHAIPALQPIVYDLFLLRGTS
RSDVSKELETQREVVVSMLLRLIQYHQALEMFVIILQQCHRESEERWKRMSRMVTDAVLP
VLVDQQVTVDSQPSLDILHRLFESVAPSVFRPVDILLKTLLAPPANVESVRGVERWMCLV
LALLRVLVSQSKEEAILSRLEEMGLHVNLTRSQPNTGMSASVMEIVRNLSAEETVAWFLL
QVIGKCAETLSREKVAVGASACSTKFLQQQVTHLMLYITHMFQSGLFRRVATAAMGLLQN
ESPTCFYSIREINQMILALSTCCPMLTLHWCNVLILLNYDDRKFWSQIVQTPQSFKMASQ
SGRGSRTLDPPKRIVECCSLEMLRRGGLILFCDYVCENLSDAEHMTWLIINHVTDLIELS
NESPVQDFISAIHRNPAASSLFIQAIHARGESVCRPSLVKKTLRCLDAIHPSQSGALVTL
LVDKFLHNHQVAVSGMCDMIICRRLEGLLAESVEESSKQLPQEDLEKLLHFMKSNGLIRQ
HERLASLLDKLRTMTCPTSKVSVSPEKTHPLAVTPTQVKDMDIDKDFFMSIARDQCFSPS
PRMRECAFLLQRLEYGDILSITMTKEFNLCVLEECISLGAFRTLLRYNRDKDSDRTTSPT
EPSLDPLFQAAQLTMFRHINNVINHLPVPHQCLNFAVSLPVRLIQYMERIDDLFTDHVWF
DMNFSLAAAFAQYIVCIRRFPWEARVPAESQTDVCRFCVLLLEMVHWSIQHDSLPTSDQL
QMCLECVAVVLQDFTLWNLIAQDDHATWACSLIAGLHQLLVSVVVLPGERVASPTQEDHS
DDLTGDDVTSLIHACDQMSDLVHCLQTRLHPANTDSRRFPTFLASLIRNIIVGLARLPLV
NTYARTPPIVWRLGWSPSPSGSHRTQLPPLPVEFLQEKDVLKEFVTRINTLGWTNRQQFE
ESWMSLLGVLNPASPTGHPLSPEEEIEQSQGMVIAVRAITALLLQAMLVPHAGNPGSSQC
EIRPRDKPLAFLTTRCGKKLSMIRGLIEQEVRNLCALKPDRLTHHPYSSPRRRIDSIHYD
LFEDNLEREFGTEEYGLGQISLESIWAVVGSLDAPLTESDTTDSLDSPQPDDVGRQTASH
TSSEGRERSISLSGLDIHSCLQFLLELYGAWLHVDNNPKPPLMLVNGVVKSMVCLSDLFM
EREQFEFMLDTLLDVVRVHPNEDELVNQYLTVGLAKATAVVGVDAATAEKVWKVIDQGLK
STHLSTKVSTLHAVLYLLEGGLSDTTRTLLPILTDFLLKHLAIVSQACIISQQFVITLWA
TAFYLLENFHEELKDTEFASKMMQLVTSTASGSEESVSTAVFLTIMKGTERLLLVDVLSR
SDIESVIKLSMDRLCLPNPQRALAALGLMFTCMYSGKSFDQYSPRPRDEPAFGGGEGGFN
TLYQDPESLILAMERVTVLFDRIKRGYPYEARVITRLLPAFLADFFPPQDIMNKVIGEFL
SSQQPYPHLIAKVVFQVFNNLHQQSQQSLVQEWVMLSLSNFTQRSPVAMATWSLTCFFIS
ASTNVWLKALFPHVLGRMGKLEVVDQRLFCLAALDFFRQLTDDMHRRSFLSTFQGVAATD
SPYNDLLACLAQSGAIAK
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggctacgattgaaaaactggtgaaggcttttgaaggcctcaaggtattccagccaggt
ggagcaggcacagaggattcttcaaagaaaaaagagcagccaccaagcaagaaggataag
attcttcactgcaatgctgtggctgactgcatttgtgctcctaacatgagaaccatagct
gattttcccaagttcttgggaatagcagtggaagcatttctgactctgtgtgatgatact
gaagctgatgtgcgcatggtttcagatgagtgtctgaacagaaccataaagacactgctg
gaaaccaatttagggcgcctgcaggtagagctgtataaggaaataaagaaaaatgggtca
tcacgctcgctgcgagctgctttgtggcgctttgctgacatgtgtcatctcatcagacca
cagaagtgcaggccctatattgtgaatttgctgccttacatcgctcgcatctgccggaga
gaggaagagacggtccaggaaacactgtcaaactccatgccaaagatctgttccgcactc
atggggtttgccaatgactccgaagtcaaggctttgttgaaatcatttttgaccaacctg
atgtcaccgtcagctgtgtgtcggcgaatggctgccagcagtttgtctctgatttgtcaa
tactctcgcagtcccatcaacttcttcacttacctcatcacagtcattctggagctggta
acaccggtggacaaggaacatgacgtgtacaccatcctgggcgtcattctgtgtttccgc
catgtcatgccccacctggcccaatcccacaacgcccgctctcagggcctcaaggacagc
ttcggcttcagggagatggagaaggaggaaggagtcagcactgaacagctgctcaagata
ctgcagctgctgctgtaccacacggcccaccctgatcacaatgttgtggtggcgtcactg
gatgccttgcagcagatgttgaagcacccccatccagccctgctgcgtgtcttgatgacc
aagggcggggtcaccaggacctacatctaccaggcagacttcatggatgccgatctcagg
gcggaaagttcaacggatttacccaacatgtcagacgatacgggtctggatgaagacctg
gatagctcagaggtgggcagtcgccctgacacagtttctagctctgatacgtcggcgttc
gcttcagactttgacgcagcctctgatgttggtgacacgcagtctgcacaaacagttcca
gcaagccaagcagcagctgaggttgaagatactgacttgcttgacacggctgtgatgcta
acaagtgacaatgactactcaaacgtggagattggtgatctcaacgaagaacgctcagag
atgtccaccctttctcacagcagcagtgctgaaacgctcctcagcattaaaagcatcagc
cctaagagacagccaccctcaaacagtgatggcagccaaggccacattcagcatgatatg
aacggaaatccagagtacgatcagattgaacgagaagagacctcggagacctcggaagtt
caagaagctcctacagcaacaaactcacaagcccagaaagaaaacgagaacgtcttagat
attgggtctctgcttgacgagaaggaaatgcctctgctgtacatgctgcgggtgatatgt
cggacgttcctgcttaaaggggaagagggtcagctggtacacgatcgtcacgtgcgcgtc
agcctcaagtctgtggcacttgcctgtgtggcttccatcttctctctgtgccccaggttg
tcgctgggcaagttggtgccatcagatgagtccagtcaggatttgagcgacgttctgctg
tatgcaagccaccctgaccaccagctgaaagggctgacagcgctgatggtgggagctctc
attcgggccgtgttggtggagggacgcggagacttcaactactggtttcacttgcaggat
ggtcaagaaaatgatgccatcacaatagagcatctcctgaaaacgctggtggggattttg
gatgacgattcggcagtggcaacccgtcattcactgagcgccttgcagcagtgtctgccc
cagttgttggacagctgtcatggccgacttggtcttcagctgctccttgacctcatcaag
gtcaaatccaacccttactggctggtgaaggtggaactactggacatcctgggcgcgctg
aacttcaagaagatcagctacctggaatctatcagcgaggacatccagcaaggggaccat
cattttcaagggaggatccagctacagcagcattatgtgcggaaagtcattataccattg
ctgggggatgaagatggcagggtgcgcaatgcttctgcttcatcactcatcaggttgata
cccaatctgttcttctccgtggacaaccctcaacacgacgccgtcattgccgcagccaag
gacgaatcagacatcttgctgtatcccatcatgcacgagttctcgatggaggctccgccc
ctggtgcagggtctggtaccgccgtatcactttaacgtcttgcaggaggttgtgccggct
gtggagagctctctgtcccgcatcgtgcagatgctgatgcaccagctcttggtgtctcag
tcacgctccttgacgagtggatgctgccgagcgctatgccgcttgtcggagaggttcctc
gtaacaccgtacgcttcagcatgggggtgtggtccagccaaacagatgacgacgcgagat
tcctcagggcgtgtcaacgtgaagcgccctcccagcaggtctctcagttcctccagttct
ctgagcttggaagagctgacagcaggaataggaggagggccgttgcaggtgatcctgtct
ctgatgctgttcacgcaggcaacgctggatctctccacccatcaggatatgctgcagttt
gctggcaacctcattgctggttctgcctacaagtctctgcggtcagcggacgagatggcc
agcatggcaggggcaggggaggagaacaagtgggcggccgtcatggatcgcatgctggtc
ccctccattgaacatcttctcacgcatgtggccagaattttgaacgcgtgcacccatgtg
atcgatgagacggtgcccggtccccctcaggtgaaaccatccctcccctccctccccaat
gcaccgtccttgagtcccgtcaagcgcaaggtcaagggcacggagaaagaaccctcgtcg
ccgctggcaaccgcccaaggtgcagattctaagacaccacagaaaacaccatccaaagag
ccaaaagattcagaaaaagagaaaaacaagaaagaaggcattggaacattctacaatttg
cctcagtatgtgaagctgtacgaagttctcaggggagcatactcaaattacaagatctcg
ttagacctgagtagcacagacaagttctgttcatttgtgcggaccgcacttgatgtgatg
gcccagctgctggagattgccacgctatttgacatcggcaagcacgcagacgagatcctc
agctacttcaagagcactgtggtgctggagcccacctccactgtgctgtgtgttcagcag
ctcctcaaggcactgttcggcaccaacctggccagccagtgggagtgtgagcagcagaat
gcgggggttgtgcgaccggccaaggccactcgcctgtcgtccagtggcaagcctggcctg
taccacaactgcctgggtcagccctacgctcacctgactcactccctgctcaacgcaaca
tacaaagctgctacgcagatggatactgaggatccaaacagttccttgatgtggctgaaa
aagcgtgtggaaaggaaagtgccagccatcctcaagccaagtagcaaagttgacaagtcc
gtaataggctcttacatccgcctatttgagccactggtgatcaaagccctgaagcagtac
acagtgacgtcatgtctggagcttcagcggcaagtccttgaccttctgacccagctcatc
cagctccgcgtcaactactgcctcctggactcggacatgatcttcatcagcttcgtcctc
aagcagtttgagttgattgaggaggggcagatcagaaactcagaggtactggtgccacac
attttccagttcttagtgatgctgtcctatgagaaataccacagcaagcccatcattgac
atgccaaggatcattcaccgctgtgacggcatcatggcgtctggcatgagaccggacact
cacgctatcccagcactgcagccaattgtgtatgacctgttcttgctgcgaggcacgtcg
cggtcagatgtgagcaaggagttggagacacagcgagaagtggtggtgtccatgcttcta
cggctgattcagtatcaccaggcgctggaaatgtttgtcatcatcctgcagcagtgtcac
agagagagtgaggagaggtggaaacgcatgtcacgcatggtcactgatgctgtcttacct
gtccttgttgaccaacaggtaacagtggatagtcagcccagcctggacatcctgcatcgt
ctgtttgagtctgtggcccccagcgtcttcaggcctgttgacatcctgctgaagacactt
cttgctccaccagccaatgttgagagtgtgaggggcgttgagcggtggatgtgcctggtg
ctggccctgctgagggtgctggtgtcgcagtccaaggaggaggccatcctctcgcgtctg
gaggagatggggctgcacgtcaacctcacccgctcccagcctaacactggcatgtccgcc
tccgtcatggagatcgtccgcaacctctctgccgaagaaactgtagcctggttcttgctg
caagtgatcggcaagtgtgcagagacgctgagcagggagaaagtggcggtgggggcttcg
gcgtgcagcaccaagttcctgcagcagcaggtcacccatctcatgctctacatcacacac
atgtttcagtcaggtttgttccgccgagtggccacagcagcaatgggactcctgcaaaac
gagagccctacttgcttctacagcatccgcgagatcaaccagatgattctggcgctcagc
acgtgctgtcccatgctcaccctgcactggtgcaacgtcctcatccttctcaactacgac
gatcgcaagttctggagtcagatcgtccagacacctcagtctttcaagatggctagtcag
agtgggcgagggtcaaggacgctggatccgccaaaacgtattgtggagtgttgcagcctg
gagatgctgcgaaggggaggtctcattctcttctgcgattatgtgtgtgagaatctgagc
gacgcggaacacatgacctggctgatcatcaaccacgtgactgatcttattgaactttcc
aacgaatcaccagtccaggacttcatcagtgcaatccacagaaatcctgccgcaagcagt
ctcttcattcaagccatccacgctcgtggggagtctgtgtgccggccttcactggtgaag
aagacgctacgatgccttgacgccattcacccgtctcagagcggagccctggtgactctg
ctggtagacaagttcctgcataaccaccaggtggcggtgagcggcatgtgtgacatgatc
atctgtcgtcgcctggaggggctgctggcagagagtgtggaggagagcagtaaacaactc
cctcaagaagacttggagaaactgctccacttcatgaaatccaatggcttgataaggcaa
catgagcggctggcctcgttgctggacaagctgagaaccatgacgtgtccaacatcaaaa
gtgtcagtctcaccagagaagacacatcccttggctgtgacccctacacaggtcaaggac
atggatattgacaaggatttcttcatgagcatagccagagatcagtgcttttccccttca
cccagaatgcgagagtgtgccttcctgctgcagagactggagtatggagacattctctcc
atcaccatgacaaaggagtttaacctgtgtgtgctggaggagtgcatctcgctgggagcg
ttccgcaccctgctgcgctacaaccgcgacaaggactcagatcgaaccacgtccccaaca
gaacccagcctagacccgctgttccaggcagcccagctcaccatgttccgtcacatcaac
aacgtcatcaaccacctccccgtcccacaccaatgtctcaactttgctgtcagcctccca
gtgcgccttatccagtacatggaacgtatcgacgacctcttcacagaccatgtgtggttt
gacatgaacttcagcctggcggcggcctttgcacagtacatcgtgtgcatacgccgcttt
ccctgggaggccagagttccggctgagtcccaaacagatgtttgtcgcttctgtgtgctt
ctgttggagatggtccactggtcaatccagcatgacagcctgcccacgtctgaccagcta
cagatgtgcctagagtgcgtggcagtggtccttcaagacttcacactgtggaacctcatc
gctcaggacgatcacgccacgtgggcctgctccctcattgctggcttgcatcagctcttg
gtgtcagtggtggtgttgccgggagagagggtggccagtcccacacaggaagaccactca
gacgacctgacaggagatgatgtgacgtcgctgattcatgcatgtgatcagatgtcagac
ctggtgcactgtctgcagacgcgattacaccctgccaacacagacagcagacgcttccca
acgttcctcgcctcccttattcgcaacatcattgttggtttggcgcgcctccctctagtc
aacacgtacgccaggacccctcccatcgtgtggagactggggtggtccccctcacccagc
ggctctcatcgcacgcagttgcctcccctacctgtggagtttctgcaggagaaagatgtt
ctgaaggagtttgtcactaggatcaacactctgggctggaccaatcggcagcagttcgag
gagagctggatgagtctgcttggagtgttgaacccagcgtctcctaccggtcaccccctg
tccccggaggaagaaattgagcagtcgcaagggatggtgatagctgtacgggccatcact
gccctgctgctgcaagccatgcttgtgccgcatgctggcaacccaggcagcagccagtgc
gagatcagacccagggacaagccgctcgcctttctcactacaagatgcgggaagaagttg
tctatgattcgtggccttatcgaacaggaagttcgcaatctctgcgctttaaagcccgac
cgactcacccaccatccgtacagcagcccacgccgtaggatagactccatccattacgac
ctctttgaagacaacctggagagggaatttggcacagaagagtatggcttgggacagatc
tcactggagtcaatctgggctgtggtcggcagtttggatgctcccctcaccgagtcagac
accacggactccctcgacagcccgcagcctgatgatgtgggccgacagacagcctctcac
accagcagtgagggccgagagcgttccatctctctgagcggccttgacattcactcttgc
ctgcagttcttgctggagctgtacggagcctggctgcacgtcgacaacaaccctaagccg
ccactgatgctggtcaacggtgtagtcaaatcgatggtgtgcctgtcggacctgttcatg
gagcgagaacagtttgagttcatgctggacaccttactggacgtggtacgagtccacccc
aacgaggatgagctggtcaaccagtacctgactgtcggactggctaaggctaccgctgtt
gtgggtgtggatgcagcgacagcagagaaggtgtggaaggtgattgaccagggcctgaag
agcacacacctgtccaccaaggtgtccaccctccacgccgttctctacctgctggagggg
ggactcagcgacaccacccgcaccctcctgcccatcctcaccgactttctcctcaaacat
cttgccattgtctcacaggcatgcattatcagtcagcagtttgtgatcacgctgtgggcg
acggccttctacctgctggagaacttccacgaggagctgaaggacaccgagtttgcctcc
aagatgatgcagctggtgacaagcacagcctcaggcagtgaggagagcgtctcgacagcc
gtgtttttgaccatcatgaaaggaacggaacgactcttactggtggatgtcctgtctcgc
tcagacatagagtccgtcatcaaactcagcatggacagactgtgcctacccaacccacaa
agagctcttgccgccttgggcctcatgtttacctgcatgtactcgggcaagtccttcgac
cagtacagcccgaggcctcgtgatgagccagcgttcggcggcggggagggcggtttcaac
accctatatcaagatcctgagtccctgattctagccatggagagagtcactgtgctcttt
gacagaatcaagagaggatacccgtacgaggcgcgagtgattacacgcctgctcccagca
ttcttggccgacttcttcccacctcaggacatcatgaacaaagtgatcggggagtttctc
tccagtcagcagccttaccctcatctcatagccaaggttgtctttcaggtgttcaacaac
ctacaccagcagtcacagcagagcctggtgcaggagtgggtgatgctgtcgctttccaac
ttcacgcagcgctctcccgtggccatggcaacctggagtctcacctgtttcttcatcagt
gcctccaccaacgtgtggctcaaagctctctttccccacgtgctgggtcgtatgggtaag
ctggaagtcgtggatcagcgactgttctgcctggctgccctggatttcttccggcagttg
acagatgacatgcatcgtcgctcattcctctccaccttccagggtgtggccgcaactgac
tcgccctacaatgacctgctggcatgtctggcgcagtcaggggcaattgcaaaatga
DBGET
integrated database retrieval system
