Littorina saxatilis: 138981624
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Entry
138981624 CDS
T10665
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138981624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138981624
Spliceosome [BR:
lsax03041
]
Complex A
U1 snRNP components
U1 related factors
138981624
Complex B
138981624
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
138981624
NCBI-ProteinID:
XP_070210705
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Position
LG12:complement(26231120..26272526)
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AA seq
803 aa
AA seq
DB search
MSNQNPGSGGQPGMIPPPYGMPPPGGPPPGFMPPMGPPMQGYNGPPGMPPPVFPPGMPPP
MGFPPPMFPAGGDMGPGGPGGPAGQEGKSPWGEYKAPDGRTYYYNGVTKKSSWEKPDELK
SQTERLLSQCPWKEYKSDSGKVYYHNSQTKESCWTKPKELEELEDKITKQAEEGASSIPV
PGNQSSTPSSAIQAAMEATLASISLPPPPSAAHNPAMPSLPPTTNASARAPTKDRSKSKS
PESDEETPPPKKEYHFKNKKEAIEAFKTLLKEKDVPSTASWESAMKLIINDGRYGALRHL
NEKKQAFNEYKTQRAKEEKEENRIRAKQAKEDLEQFLLHNDKMNSSVKYWKADNIFGDLE
VWKNVSDRDRRDLFDDVVHLIAKREKEEAKALRKRNIKVFSEILDSMPNLQYCTTWSEAQ
QMLLDNTRFTEDPDLENMDKEDALICFEEHIRMLEQEYDDEKERERRRQKRIQRKNRESF
LVLLDELHDKGKLNSMSLWMDLYPAVSQDVRFSSMLGQSGSTPLDLFKFYVEDLKARFHD
EKKIVKEILKEKSFFIEVSTTYEDFSAVILSDKRASSLDSGNIKLTYNSLIEKAEAREKE
RLKEEARKLKKLENNFKAALSKHGVELETTFEEAKAKLEKDSSWDAITLESERMRLFKEY
ITTMEESCMHHHSRHKKSRKRKSRRSRSRSPSSESEEDSSRHKSKKKKKTRSESRSSDSD
DEADQSSRKHKKKSKKKKRTSRSASRSDVSDAEPEREYSKRKRHTPEPKKEKNDWNSSGS
DMSEGELEQRRRILLQQLAGADA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcaaaatccaggaagtggaggacaacctggcatgataccacctccgtacggg
atgccaccccctggcgggccccctccaggatttatgccccccatgggaccgccaatgcaa
ggttataatggaccaccaggcatgccaccccctgtgtttccaccaggcatgcctcctccc
atgggctttcctcctccaatgttcccagcaggtggagatatgggacctggaggtccaggt
ggaccagcaggacaggaaggcaagagtccttggggggagtacaaggctccagacggacgg
acatactattacaacggtgtgacaaagaagtcgagctgggaaaaacctgatgaactgaag
tcacaaacagagagactgctatctcagtgcccttggaaggagtacaagtctgactcgggc
aaggtgtactaccacaactcacagaccaaggagagctgctggaccaagcccaaagaactg
gaggagttggaggataaaataacaaaacaggctgaggaaggtgcatcctccattccagtg
ccaggcaatcagtcttccactccatcatctgccatccaggcagccatggaagctaccctg
gcctccatctccctcccccctcccccctctgctgctcacaaccccgccatgccatcacta
cctcccaccacaaacgcttctgcaagggcaccgaccaaggatcgttctaaaagtaaaagt
cctgaaagtgatgaagagacaccgcctccaaagaaagagtaccattttaaaaacaagaaa
gaggctatcgaggctttcaaaactttattgaaagaaaaggatgttccatctacagcttca
tgggagagtgcgatgaagctgatcattaacgacggtcgttatggggcactgcgccacctt
aacgagaagaaacaggccttcaatgagtacaagacccagagggccaaagaggagaaggag
gagaatagaatccgggcgaaacaagccaaggaggacttggaacagtttctgctgcacaat
gacaagatgaactcttctgtgaaatactggaaagctgataacatttttggtgaccttgag
gtttggaagaatgtcagcgaccgagacaggcgtgacttatttgacgacgttgttcacctg
attgccaagagagaaaaggaagaagccaaggcgctacgtaagcgcaacatcaaagttttc
tctgagatcctggacagcatgcccaacctacagtactgcaccacgtggtcagaagcccag
cagatgctgctagacaacacgcgattcaccgaggaccccgaccttgagaacatggacaaa
gaggatgcactgatctgttttgaagagcacatccgcatgttggagcaggaatatgatgac
gagaaggagagggagaggcggcggcagaaacgcattcagcgtaaaaacagagaaagcttc
ctggtgttgctggatgagcttcatgacaaaggcaagctgaactctatgtccctgtggatg
gacctgtacccagcagtctcgcaggacgtgcgtttctccagcatgctggggcagtcaggc
tccaccccactcgacctcttcaaattctatgtcgaagatctcaaggccaggttccatgac
gagaagaagatcgtcaaggaaatcttgaaggaaaaatcattcttcattgaagtttccacc
acatacgaagacttcagtgcagtgatcctgagtgacaaaagggccagcagtctggactcc
ggaaacatcaaactcacctacaacagtttaattgagaaagcagaggccagagagaaagag
agactgaaggaggaagccagaaagctgaagaagctagagaataacttcaaggctgcactc
agcaagcacggggtggaactggaaacaacatttgaagaggccaaagccaagctggaaaag
gactcgtcgtgggatgccatcactctggagtctgaacgtatgcgtctcttcaaagagtac
atcaccaccatggaggagtcgtgcatgcaccatcactcacgccacaagaaatccaggaag
cgcaagagccgccgctctcgttctaggtctccatcgagtgaatctgaagaggacagttct
cggcacaaatccaagaaaaagaagaaaacacggtccgagtcaaggtctagtgattcagat
gatgaggccgaccaaagttcaaggaaacacaaaaaaaagtcaaagaagaagaagagaacg
tcaagatcggcttctaggtctgatgtgtctgatgctgaaccagaaagggaatattccaag
agaaaaaggcacactccagagcctaagaaggaaaagaatgactggaactcatccggcagt
gatatgagcgaaggggagcttgaacaaagacgacgcatattactgcaacagttagcggga
gccgacgcttga
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