Littorina saxatilis: 138981662
Help
Entry
138981662 CDS
T10665
Name
(RefSeq) ATP-dependent RNA helicase DHX58-like
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lsax04054
]
138981662
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138981662
Pattern recognition receptors [BR:
lsax04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
138981662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RIG-I_C
ResIII
Helicase_C
RIG-I_C-RD
CARD_2
SWI2_SNF2
CARD
Terminase_6N
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
138981662
NCBI-ProteinID:
XP_070210755
LinkDB
All DBs
Position
LG12:complement(27962788..28010047)
Genome browser
AA seq
1079 aa
AA seq
DB search
MEGNRGNQPGQSPALRLSVEEWKHRVSAFREHFISIMQPLQVFLKAKLNTDPEGRVLQEE
LQNMGERNIEAAEKLLSFLLKEDHRTEADIAARWQLFGDVLKEDHSVLHKIITGQRQGDI
QTEQKRRIDFYTDKITADVDPYAILPYLIANNLLGQMECEHVKSIYEQRGSTWSALYMVG
NIHRINPDWYNIFLGVLYEQGYKELVRIVDPDVYHNQGAAYVPVQESNQLNPQKSREIRP
LGRDVTGVTPEYSGIHSAHRRGSDANSDSEGEDEFHSYNSSSEEDEFHSYSSSPDPSLNI
DLELTKVKTVMACTNESQTPQDEARAGLTGRNMDVDKADNSENNPDNCNADVDRPARSEE
RCEPPKAKMQLYPDQVELAQDGLAGKNVIIVSPTGSGKTYVALHIIKNHLEQERPGVRRA
VFLVNNRALAEQQYRQYFFKYLSNFRITLVVGGDGATASLNQLLNSADIFVMTAQILLNA
LEQKEIDGIHEFSLVVFDECHHTQLKHTYNRIMHHYMALKFQGKDGSADVRVPRLPVQVV
GLTASVGVGNARTPTEAEEHVMKLCAHLDTEHISTVQENLEQLHSRTNKPVHQRAECGTR
PNDKFHTMIREIMTKIEESIEHSEYVDSDVTGGLQARMRQKPHQRGSCQYTNWISELLRT
VALLPDGQACRALKPCCDMLKIYNDSLLINDECDTEDALNFLDQQMSDYDPTGQRNTQTD
RFLKDLFQTNKSNLTVVSKEQADTNPKLNVIEDKLIKTFEETADSRAVLLVQTREQADIM
LRWLRRRPWLHRLNVKPEKMVGACASADKGGMTDTQQKDVLDNFREGRYNVLVATSIAEE
GLHFPSCNLVTLVNHVTNEIAYMQARGRARAENSEFFIVAGENKGVQQKAKDLDIGEMMM
HEAVRQVQALSKQNHVQFLEQLYQIQEKEKKERDAELTLRQNRHLEQGEVEFHCVLCNEF
AFRSSDVRRIDNTHYVVIDLDYCLRHTEEMHHPQLLGRIQNVGRLYCNGCEEYRGPILVY
RKLKFPCVKLEGFRYTNASGEKNVAKKWVKTKLVVKEMTDNELDQYRKKAVEIGYVFKS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaacagagggaaccaaccaggacagtcccctgccctccgacttagtgtggag
gaatggaaacacagagtgtccgcctttagagagcatttcatcagtatcatgcaacctctg
caagtttttctgaaggccaaactgaacacagacccagagggaagagttcttcaagaggaa
ctgcaaaacatgggcgagcgaaacattgaggcagcagagaagttgttgtcctttctgctg
aaggaagaccaccggacagaagcagacatcgctgcaaggtggcaactcttcggggatgta
ctgaaagaagatcattctgtgctgcacaagatcatcacaggccaacgccagggggacatc
cagaccgagcagaaaaggcgcatcgacttttacacagacaaaatcaccgctgacgtcgat
ccctatgccatcctcccctatctcatcgctaacaacctcctaggacagatggagtgcgag
cacgtgaagagcatttatgagcagaggggatccacatggagtgctctctacatggtgggc
aacatccaccggatcaaccctgactggtacaacatcttccttggtgtgctctatgaacaa
gggtacaaggagctcgtcaggattgtagaccctgatgtttaccacaatcaaggtgctgcc
tatgttcctgtgcaagagtctaaccaactcaatccacaaaagagcagagaaatccgtccc
ttaggacgcgatgtgactggtgtcacccctgagtattcagggatccactcggcacaccgc
agaggcagtgacgcaaattctgattcggagggggaggacgagttccattcgtacaactca
tcttctgaggaggacgagtttcattcgtacagctcatctcctgaccctagcctcaacatt
gaccttgaacttaccaaggtcaaaacagttatggcgtgtacaaacgaatcccagacgccg
caagacgaagcccgagcaggtctaacaggcagaaatatggacgtcgacaaagcagataac
tccgagaacaatccagacaactgcaatgctgatgtggaccgaccagcgagaagtgaagaa
cggtgtgaacctccaaaggcgaaaatgcagctttaccctgatcaagttgaactggcccaa
gatggacttgccggaaagaacgtcatcatcgtttctcccacaggctcaggcaaaacatac
gtggcactccatatcattaagaaccaccttgagcaagagcgtccaggggttcgcagggcg
gtgttcctggtaaacaaccgagcactcgcggagcagcagtacaggcagtattttttcaag
tacctcagcaactttcgcatcacacttgttgtcggcggcgacggggcgacagcttcgtta
aatcagctgctcaacagtgctgatatatttgtgatgacagcccagatcttgttgaacgcc
ctggagcagaaggaaattgatggcatccatgagttttccttggtggtgtttgatgagtgc
caccacacgcagctgaagcacacgtacaaccgcatcatgcatcattacatggccctcaag
tttcagggtaaagatggaagtgcagatgtgagagttccgcggctacctgtgcaggtggtt
ggcttgacagcctcggtgggtgtggggaatgcacgtactccaacagaggcagaagagcat
gtcatgaaactctgtgctcatttagacaccgagcacatcagcactgtccaggaaaacctt
gagcagcttcattccagaaccaacaagcctgttcatcagcgggcagaatgtggcacacgg
cctaacgacaaatttcacaccatgatccgagaaattatgacgaagatcgaagaaagtatt
gaacattctgaatatgttgacagtgacgtaacaggcggtctgcaggcaaggatgagacag
aagccacaccagaggggaagctgccagtacaccaactggatatctgagctcctgaggact
gtcgcactgctgcctgatggacaggcatgtcgggcgctcaaaccctgctgcgatatgctc
aaaatttacaacgattctctgttaatcaacgacgaatgtgacacagaagacgcactgaac
tttcttgaccagcagatgagcgactatgaccccaccggacaacgtaacacccaaactgac
cgcttccttaaggaccttttccaaacgaacaagtcgaacttgacagttgtgagcaaagaa
caagccgacaccaaccccaaacttaacgtcattgaggacaaactcataaagacatttgag
gagacagcggactcccgggctgtgttgcttgtgcaaaccagagagcaggctgacatcatg
cttagatggctaagacgaaggccttggcttcacagactcaacgtcaagcctgagaaaatg
gttggtgcctgtgcctctgctgataagggaggaatgactgatacccagcagaaagatgtc
cttgacaatttccgtgaaggtcgttacaacgtgctggtggcgacatctatcgccgaggaa
ggtctgcactttccatcctgtaacctggtcacccttgtcaaccatgtcaccaacgaaatt
gcttacatgcaggccagaggtcgagcacgtgcagaaaacagcgagttctttattgtggct
ggtgagaacaagggagttcagcagaaggcgaaggacctggacattggagagatgatgatg
cacgaggctgtcagacaagtccaggccctcagtaaacaaaaccatgtgcagttcctagag
caactgtaccagatacaggaaaaggagaagaaggagcgtgatgcagagctgaccctccgc
cagaacagacatcttgagcaaggggaggttgaattccactgtgtgctgtgtaacgagttt
gccttcaggtcctcagatgtaaggcgaatcgacaacacccactacgtggtcatagacctt
gactactgtctcaggcacacggaggaaatgcatcatccacagctgctaggcagaatccag
aacgttggaaggctctattgcaatggatgcgaagagtaccggggccccatactagtgtac
cgtaagctgaagttcccctgtgtcaaactggagggctttcgctacaccaacgcgtcagga
gaaaagaacgttgccaagaaatgggtgaaaaccaaactggtggtgaaggaaatgacagac
aacgagctcgatcagtaccggaaaaaagctgttgaaattggatacgtgttcaagtcctga
DBGET
integrated database retrieval system
