Littorina saxatilis: 138981692
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Entry
138981692 CDS
T10665
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lsax Littorina saxatilis
Pathway
lsax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138981692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138981692
04121 Ubiquitin system [BR:
lsax04121
]
138981692
03036 Chromosome and associated proteins [BR:
lsax03036
]
138981692
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138981692
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
138981692
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138981692
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
138981692
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
138981692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
zf-RING_6
Ank_4
Ank_3
BRCT
BRCT_2
Ank_KRIT1
RTT107_BRCT_5
zf-RING_5
zf-C3HC4_3
PTCB-BRCT
zf-RING_10
RuvX
zf-RING_2
Prok-RING_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
138981692
NCBI-ProteinID:
XP_070210812
LinkDB
All DBs
Position
LG12:29379844..29392717
Genome browser
AA seq
793 aa
AA seq
DB search
MIRHRMDLTLDISGFESTKAALASLQRLLFCCQCSQLTKNVCTLGNCEHFFCKQCVEERL
GARCPVCGTPAHAKDAQVNRQLSNIVSLSVELERLLKADSGSEFRDTGPQDIVSSLNDHD
LTPERHRESPHGTATSLESPRKAEEGSKATSPSPGRSAGKRLSHKVAHRKGRKEANEATL
TQLCSGTNSCDTDEESFKQTPVRSTASPFHFQKKLTPQTRVRSKRLQSGPQTKQNENTHE
SNFEDSTLSKTFINEKLAAAKEVCYADEKMTTASPMQQVHDTPQRRGRRKKQVDAKGMLD
QTSSSPLSSGSRSRSQRGSVSSSHPAACETPTSSPVSTPYSCSNSTPRRTPRSTPKTSLR
RKSAPETPNSRTPRSVKSASKSERKFFPSTPSPAQGTRPSPVSNSSAVKRTNRRSMETGS
GSNGVRMKRNAKGETPLHVAAIKGDLSAVKELMSKGDNPNVRDNAGWTPLHEAVNHGNAG
VTEVLLQHGALVNTPGMENDTPLHDAVTNNRLECVRLLIAYGASVTARNVHGKTAMELAK
IAEMKDALQQPALHRQHISNLPEPEDAEEFLPLCLLGTALSRDQRGLLQKCATKLHARVV
EEYTAEVTHVISSVNADGQCPRTTKYLQAVLGGKWIVSVDWITICLEYGEKVSEEPFEIP
GSSTHPNSHAAHEARINRRLQLPPLFDGCQVYLHGSFTRMPPSKQELTELLRLGGAHFLT
REPRLTNLDEYEVTVPYHAKQGSSLVDCGIFIVHDGGSNVPRVEAQRMRVVPASWVVACI
ATFSLVEPSSLAN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgataagacacagaatggatttgacgcttgacatatcaggatttgagtcaactaaggcg
gcgttagcttctttacagcgcctactcttctgctgccagtgttcccagttaacgaagaat
gtatgcacgctaggcaactgcgaacacttcttttgcaagcagtgtgtagaagagaggctg
ggagcacgttgtccagtgtgtggcacacctgcacacgcaaaggatgcacaggtgaacaga
caactctcaaacattgtctccttatctgtagagctggagcgcttgctcaaggcagattca
ggctcagaatttagagatacagggccacaagatattgtcagctccttgaacgaccatgat
ttaactccagaaagacacagagagtctccacatggcacagcaacatccctggaaagccct
agaaaagctgaagaaggctctaaggcaacatccccttcaccaggtaggagtgctggtaag
cgtctttcgcacaaggtggctcacagaaagggccgtaaagaagcaaatgaggcaactctg
acacagctctgcagtgggaccaactcatgtgacacagatgaagaatcattcaagcaaaca
cctgtcagaagcacagctagtccgtttcactttcagaaaaagcttacgccacagacaaga
gtgcggagcaagcgactccaaagtggccctcaaaccaaacagaatgagaacacgcatgaa
agcaactttgaggacagcacactgtccaaaaccttcatcaatgagaaacttgctgccgca
aaagaagtttgctacgcagatgagaaaatgacaactgcttcacctatgcagcaggttcat
gatacacctcagagaaggggaagacgaaagaagcaagtagatgcaaaaggaatgctggac
caaacgtcttcatcgccattgtccagtggtagtcgcagcagaagccaacgagggagcgta
tcatcgtctcacccagcagcctgtgagactcccaccagttccccagtgagtacaccgtac
agttgctcaaattctaccccaagaagaacaccccgaagcactccaaaaacttccctgaga
cgcaaatcagcgcctgagactcccaactccagaacacctcgctcagttaagtcagcttct
aaaagtgaacgcaagtttttcccttccacaccctcaccggcccagggcaccaggccctcg
cctgtgtccaacagcagtgcagtaaaaaggaccaacagaagatctatggagactggcagt
ggcagtaatggcgtgcgaatgaagcgcaatgccaagggagagactccacttcatgtggct
gctatcaagggtgacttgtctgcagtgaaggagttgatgagcaagggagacaatccaaat
gtcagagataatgctgggtggactcctttgcacgaagcagtgaatcacggcaatgcaggt
gtgacggaagtgttgctgcaacacggcgccttggtcaacacacctggcatggaaaacgac
acgccgctacatgatgctgtcaccaacaaccggctagagtgtgtgcgtctgctgatagct
tatggtgcgtctgtcacagctagaaatgttcatggcaaaactgcgatggagttggccaaa
atagcggaaatgaaggatgccctccaacagcctgcattgcatcgacagcacatctctaac
ttaccagagcctgaggatgcagaggagttcctgcctttgtgtttgctgggcactgcctta
agcagagaccagcgtggcctgctccagaagtgtgccaccaagctgcatgccagagttgtg
gaggagtacactgctgaagttacccatgtgatcagcagcgttaatgcagacggccagtgt
cctcgcaccaccaagtatcttcaagctgtcctcggagggaaatggattgtcagtgtggac
tggatcactatctgcctggagtacggtgagaaagtgtcagaagagccgtttgaaattcca
gggagcagcacccaccccaactcacacgctgcccatgaagcccgcatcaatcgcagacta
cagcttccaccactgtttgatggctgtcaagtttacctgcatggctctttcactcgcatg
ccgcccagcaagcaggagttgacggaactgctacgattgggcggagctcacttcttgacc
cgcgaaccccgtctgaccaacttggatgaatatgaagtgacagtgccgtaccatgctaaa
caagggagtagccttgttgactgcggaatattcatcgttcatgacggaggcagcaacgtt
ccaagagttgaagctcagaggatgcgtgtggtgcctgcgtcctgggtcgtggcgtgcatt
gcaaccttctcactggttgaaccgtcaagtctcgccaattaa
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