Littorina saxatilis: 138981889
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Entry
138981889 CDS
T10665
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsax03000
]
138981889
04121 Ubiquitin system [BR:
lsax04121
]
138981889
Transcription factors [BR:
lsax03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
138981889
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
138981889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
138981889
NCBI-ProteinID:
XP_070211131
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All DBs
Position
LG12:complement(38702959..38762822)
Genome browser
AA seq
1109 aa
AA seq
DB search
MSNGYTFTQFMQAALGPDPRDPRFYQQPPPPPHSGGSSLSALAPAFNPGIPPPNMLPAQG
HQNVPQQFYQMNTPSARKHQSSGDARVHFQGSQDFLPQPDMGSEDSGQFQQHPSHRGNFS
FHRGGRGRARGQGVHRGRGGFGQGQNQYQYSNRGYHSQSQSQSQNFPNSSGNKPRQQQHS
RARERHSKDDNGDLLYSHADLNAAQNSQGGGGNQESNDVRQRNTYVRPVNQYNSRVNGHP
HSQNGARNESARGGRRGYRGDHEDRTTPPDCHSDKQGSAAQYKNRNGLRDRATPPDSDKQ
GSAAQYKNRNGVRSANSSRKKAADDDQPETGDRRAQMEEQLKRGCYECMVCCDNIRQEVA
VWNCQKCYHVFHLRCIKQWVKSSLEAEEDIWRCPACQNLNLKPPNGYRCFCGKVKDPKFQ
PGETPHSCGEVCRRKGKENCTHKCTLLCHPGPCPPCNAVVQRTCGCGAERKSMRCGQITV
FKCEKVCGKDLNCGKHQCQVVCHEGDCPPCEVTLQQECYGGHKNREVVCGSEEAILLSFS
CKQPCGKTLGCDNHVCEELCHPGECGVCSLLPGQVSHCCCGQTPLSQLTDAPRTSCLDPV
PTCEKICSQPMTCGPEDAPHFCPKQCHEGPCGQCEGITELTCVCAANQKEFPCRELDQFT
DAEPFKCERRCNKKRMCGRHKCNELCCTRDVHICEVVCGRDLNCGLHKCEQLCHRGNCRP
CLQASFEELTCHCGAEVMYPPIACGTKPPPCHRLCTRQHNCSHPVRHACHSDEACPPCTE
LVHKQCLGEHQLRKNVPCYVQEIPCGRPCGKPLPCGQHKCIKTCHKGPCLEPNETCSQPC
GKKRKDCGHPCSTPCHPDVAVCPEIPCRALIEIKCTCGNRTGKVLCQAGSNLSTEIAQFQ
RLTVQAMASGAPGQELDISQLTVQKKNTSRQLECDSSCALIERNRRMALALEIQNPDLDN
KMTGPKFSDFLKESAKKYPTFIAKVEKNLADLVQSAKQSKQPSRSYAFPSMNRDQRRVVH
ELAEVYGCETQSYDYEPNKNVVATAQRNKCWLPPVTLSASVSQRKAPPPMTKAVAAWGSD
KSATSLFKDKEKDKSKDKPEIDYFDFSPK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacggctacaccttcactcagttcatgcaggcagcattgggaccagacccaagg
gacccaagattttatcagcaaccaccaccaccaccacactcaggaggaagctccctctcc
gcgctggcccctgctttcaacccaggaatacctcccccaaatatgcttcccgctcagggg
caccaaaacgttcctcagcagttctaccaaatgaacacaccctcagcccgcaaacaccaa
agcagtggtgatgctcgagtccattttcagggctcccaagactttctacctcagcctgat
atgggttctgaagacagtggtcagttccagcagcatccgtcccatagggggaactttagt
ttccacagaggaggtcggggtcgtgcaagagggcaaggggttcatcgtggcagaggtgga
tttggtcagggacaaaatcagtatcaatatagcaacagaggataccactcacagtcacag
tcacaatctcagaacttcccaaattcttcaggaaataaaccaaggcagcaacagcattcc
cgtgccagagaacgacattccaaagatgataacggtgacttgctttacagtcatgcggat
ttaaatgcggcacagaactctcaagggggtggcggaaatcaggagtcgaacgacgtcaga
cagcgaaacacgtatgtgcgtccagtgaaccagtacaacagtagggtaaacggacacccg
cattctcagaatggagcaaggaacgagagtgccagaggcggcagacgagggtatagaggt
gaccatgaagacagaaccacaccgccagactgtcactctgataaacaaggctctgctgca
caatacaagaacaggaatggtctgcgagacagagccacaccgccagactctgataaacaa
ggctctgctgcacaatacaagaacaggaatggtgtgcgctctgccaattcttccaggaag
aaagctgctgatgatgatcagccagaaacgggggatcgcagagcccaaatggaggaacag
ctgaagcgtgggtgctacgagtgcatggtgtgctgcgataacatacgacaggaggtggcc
gtctggaactgtcagaagtgctaccacgtctttcaccttcgctgcatcaagcagtgggtc
aagtcttccttggaagctgaggaggatatttggcgctgtcctgcctgccagaatttaaat
ctgaagcctcctaatggctaccgctgcttctgtggtaaagtcaaagaccccaagttccag
cctggagagacgccacacagttgcggcgaagtttgtcgcagaaaaggaaaagaaaactgc
acacacaaatgtacactgttgtgccaccctggtccgtgccccccttgcaacgctgtcgtc
cagcgcacttgtggctgtggtgctgagaggaagagtatgcgatgtggccagatcacagtt
ttcaagtgtgaaaaagtgtgtggcaaggaccttaactgcggcaagcaccagtgtcaagtt
gtgtgtcatgaaggagattgtcccccttgtgaagtcactttgcaacaggaatgctatggt
ggtcacaagaatagagaagttgtgtgtgggtcagaagaggcaatcctgttgtctttctcc
tgcaagcagccgtgtggcaaaaccctggggtgtgacaaccacgtgtgtgaagagctgtgc
caccctggggagtgtggcgtgtgttccctgctgcccgggcaagtgagccactgctgctgc
ggtcagacgccactgtcacagctgaccgatgcccctcgcaccagctgtctggaccccgtc
cctacctgtgagaaaatatgcagccaacccatgacctgtggacctgaagatgcccctcat
ttctgccccaagcagtgccatgaaggaccgtgcggccagtgcgaggggatcacagagctc
acctgtgtgtgtgcagccaaccagaaagagttcccctgtcgcgaactggaccagtttaca
gacgcagagccattcaagtgtgagagaagatgtaacaaaaagaggatgtgcggacgccac
aagtgcaatgagttgtgttgcacgcgcgacgtacacatctgcgaggtggtgtgtgggcgt
gatctgaactgtggccttcacaagtgtgagcagctgtgtcaccgtggcaactgcagaccc
tgcttgcaagccagttttgaggagttgacgtgtcactgcggggccgaggtgatgtaccca
cccattgcgtgcggcaccaagcccccgccttgccaccggctgtgcacacgccaacacaac
tgtagccatccagtgcgacatgcgtgtcacagcgatgaggcttgtcccccttgtacagag
ctggtccacaaacagtgccttggggaacaccagctgcgtaaaaatgttccatgctacgtc
caagagataccttgcggacgcccctgtggcaaacccttgccgtgcggtcagcacaagtgt
atcaagacatgccacaagggcccttgcttggagccaaacgagacgtgcagccagccttgc
ggaaagaaacgcaaagactgcggccatccctgctctacgccttgtcatccggatgttgct
gtctgtccagagatcccctgcagagctctgatagaaatcaagtgtacgtgtgggaatcgt
accggcaaggtgctgtgccaggcaggaagcaacttgtccactgaaattgcccagttccag
aggctgacggtgcaggcgatggccagtggggcgccgggccaggaactggacatctctcag
ctcactgtgcagaagaaaaacacttccagacagttggaatgtgactcctcctgtgcgctg
attgagcgtaatcgtcgcatggcgttggcactggagatccagaaccctgaccttgacaat
aagatgaccggtcccaagttctctgactttctcaaggagtcggccaagaaatatccaaca
ttcattgccaaagtagagaagaaccttgcggaccttgttcaaagtgccaaacagtcgaag
cagccatcgagaagttacgccttcccttccatgaaccgagatcagcgacgcgtggtgcac
gagctggcagaggtgtacggctgtgagacccagagctatgactatgaacccaacaagaat
gttgtggccaccgctcagaggaacaagtgctggttgcccccggtgacactgtcagcgtct
gtcagtcagcgcaaagccccgcctcctatgaccaaagctgtggctgcatggggcagtgat
aaatcggcgacatccctgttcaaggacaaggagaaggataagagcaaggacaaaccagaa
atcgactactttgatttctcgcccaaatga
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