Littorina saxatilis: 138982136
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Entry
138982136 CDS
T10665
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138982136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138982136
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138982136
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138982136
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
138982136
NCBI-ProteinID:
XP_070211456
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All DBs
Position
LG12:49147387..49159339
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AA seq
197 aa
AA seq
DB search
MAAPMVKVPGQRLARKDETTKPGTGTYEQNGFIYSSLAGCVQKETSSDGSVQISVITDVQ
QTVVPSVEAIVTARITNVTPRFCKCSILTVGKIPLKEPFRGMIRKEDVRATEKDKVETYK
CFRPGDIVVARVLSLGDSQSYLLTTAENELGVVIATSEAGASLVPISWCKMQCPRTLAEE
FRKVARVQQEFLQYTDT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccatggtgaaagtgccaggacagcgacttgctcgaaaggatgagacaaca
aaaccaggaacaggcacatatgaacagaacggctttatctactccagcctggcaggttgc
gttcaaaaagaaacatcgtctgatggcagtgttcaaatatcagtgataaccgatgtgcaa
caaactgtggtaccctcagttgaagccattgtcacagccagaataacaaatgtgacacct
cgattctgcaagtgttccattttgactgttggcaagataccattgaaggagccattcaga
ggcatgataagaaaagaagatgtgcgtgctacagagaaggacaaggtggaaacctacaaa
tgttttcgacctggagacattgttgtggcaagagtactctcattgggagattcccagtcc
tatctcctaactacagctgaaaatgagcttggtgttgtcatagcaacaagtgaagcagga
gcgtctttggtgccgatcagctggtgcaagatgcagtgtcctcgcaccttagccgaagag
ttccgcaaagtggccagagtgcagcaagagtttcttcagtacacagatacctag
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