Littorina saxatilis: 138982519
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Entry
138982519 CDS
T10665
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
138982519
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138982519
NCBI-ProteinID:
XP_070211925
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Position
LG1:complement(86040607..86071721)
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AA seq
1059 aa
AA seq
DB search
MTEQQTWEERAERCLSLRSGQGRPLKVVREVYLRPDVPCFSPMCLAGCRNDSDALLPNGA
SHYIVPECRIAKDYLELFELTEMQGVVFTQTAAHCVQHEGSRRLAARLRRLVQDPDAGCI
LFCNEFQKYAHCLQEPQESVAEWRLRSTFRAAEWLFDHLAGQVPLVMVTQTEEEADVYRN
QKMGVLVVSFKQYIAEFWKGHAAIMELYTSLSEAAVAGKEGKQFGGYLPQAVLEEALKSG
RFVSGRLNVNRFNAVTEAFVARSGVDLTEDSGADILIVGAKDRNRAVHGDEVVVDIFPKS
QWRMRSLAVKIEEENEVEDNDDDDEAEKMKESGDKRLPTGRVVGVLKRQWRDYVASLSPN
EQGNTNSNKSGKVLVIPWDYRIPKIRIATRQVSLLKEQRCLVRIDNWPSDSQYPNGHLVK
ALGPIGDLETEIAALLAENELSTSAFTSSLLAELPTDSSEEPWVMSAEEEEQRRDLRHSH
LVFSIDPKGCEDVDDTLSLRELENGNVELGVHIADVTFFVQPGSLTDREAQERSTTIYLA
DRRYDMLPGILSANLCSLISGKDRYAVSVMWELTPKFEVVNVWYGRTIIHSKYKLFYEMA
QEVCNGCSDQDILDNVPEFQGVTGEELTQKLKELRWSLIKLTELGRSMKARRTHCGALDL
ESVEVQVQLTETKGVEDLTPKEHLEVHETIAECMIFANHWVAKKIADAFPSKALLRNHPP
PRQEQFDNLLKCATARGFYVDTSSNKALAASLDACVDAKDPLVNSLLRSLATLAMSNARY
FCTGAVHPDEFMHYGLALDRYTHFTSPIRRYADVIVHRLLLAAVKQEAEDSSCDKTRAGL
PGSKRLDEMADHMNNKHRAAQNAQRDSQELFQSIFFRDHDDDDSVCIADAVIYQLRANGV
LVFVPRYGVKGVAYLQDRNSQVLYIPKSCPPEWVSGALIRGDDLLTVDSTLGVQKYCLLE
HITVRLSVNLSHAHCQSLKIEVVAKRPHGRGDGGPAEVTTRADMVKRVKQGAEDRQGDEM
DTQSLLDSLSPELSQYRQTDPQHSLYNLFQSFHHTGMQF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcagcagacgtgggaggagcgggctgagcggtgcttgagtctgcgcagtgga
caagggcgccctctgaaagttgttagagaggtttacctgcgtcctgatgtgccttgcttc
agtcccatgtgtcttgctggctgcaggaatgactctgatgctttgctgcccaatggtgcc
agtcactatattgttcctgagtgtcggattgccaaagactatttggagctgtttgaactt
actgaaatgcaaggtgtggtcttcacacagacagccgcacattgtgtgcagcacgaaggc
agtcggcgtcttgcagcacgactgaggcgtcttgtccaggaccctgatgctggctgcatc
ctgttctgcaatgagttccagaaatatgcccactgtctgcaggaaccacaggagtctgtg
gcagaatggcgactgaggtcaacgttcagagcagcagagtggctgtttgaccacttagca
gggcaggtgcctcttgtaatggtgacacaaactgaggaggaggctgatgtgtatcggaac
cagaagatgggcgtgcttgttgtaagcttcaaacagtatatagcagagttctggaaagga
cacgcagctataatggagctgtatacttcattgtccgaagctgctgttgctggcaaggaa
ggtaagcagttcggagggtacttacctcaagcagtactggaggaggcattgaagtctggt
cgttttgttagtggccgtctgaatgtcaaccgtttcaatgctgtcacagaagcttttgtg
gctcgtagtggcgttgatctgacagaagacagcggggcagatattctgattgtcggggcc
aaggaccgcaacagagccgtccatggagatgaggtggtcgtcgacatctttcccaagtcc
cagtggcgcatgcgatctctggcagtcaaaatcgaagaggaaaatgaagtggaagataat
gatgatgatgatgaagcagagaagatgaaggaaagcggcgataaaagattaccaactggc
cgtgtggtaggtgtgttgaagagacagtggagggactatgtcgcaagtctttctcccaac
gagcaagggaacaccaacagcaacaagagtggcaaagtcctggtcataccctgggactac
aggatacccaaaatcagaattgccacccgccaagtcagccttctcaaagagcaaagatgt
ttggttcgcatagacaactggccgtctgactctcagtatcccaacggtcacctggtgaaa
gcgcttggaccaattggagacttggaaacagagattgctgctctgttggcagaaaatgaa
ctctctacctctgctttcacatcatcactgctggcagagctgccgacagacagctcagag
gaaccatgggtgatgtcagcagaggaagaagaacagcgacgagatcttcgtcactcgcac
ctggtcttcagtatcgacccaaagggctgtgaggatgtagacgacactctctcactgagg
gagttggagaacggcaacgtggaactgggtgttcacatagctgacgtgaccttctttgta
caacccggttccctgaccgacagagaggctcaggaacgatccacaacaatctacctggct
gatcgtcgctacgacatgttgcccgggatactcagtgcaaatctttgttctctaatcagt
gggaaggacaggtatgccgtgagtgtaatgtgggagctgacaccgaagttcgaggtggtc
aacgtgtggtatggaagaaccatcattcactccaagtacaagctcttctatgagatggca
caggaagtgtgtaatggctgcagcgaccaggatattttagacaatgtcccagagttccaa
ggagttacaggcgaagagctaacgcagaaactgaaggagctgcggtggtcgctgatcaaa
ctgacagaacttggacgatcaatgaaggcccggcggacccactgtggagccttggatctt
gagagtgtggaggttcaggtccagctgacagaaaccaaaggggtggaagacctgactccg
aaagagcatctggaggtccatgaaaccatagctgaatgcatgatcttcgccaaccactgg
gtagccaaaaagattgcagatgctttcccaagcaaagccttgttgaggaaccaccctcca
cctcggcaggagcagtttgacaacttattgaagtgtgcaacagcccgagggttttatgtg
gacacttcttccaacaaggctcttgctgcctccttagatgcttgtgttgacgccaaagac
cctctggtcaattcgttgctgagatctctggcaacactggccatgtccaacgctcgttac
ttctgcactggtgctgtccaccctgacgagttcatgcactatggcctggcgcttgaccgc
tacacccatttcacctcgccaatcaggagatatgctgatgtcattgttcacagactgttg
ctggcagctgtgaagcaggaggcggaagattcatcatgtgataaaaccagagctggcttg
cctggcagtaagcgcttggatgagatggcagaccacatgaacaacaaacacagggcagca
cagaatgcacagagagattcccaggagttattccagtccatctttttccgagaccacgat
gatgatgacagtgtatgcattgctgatgccgtcatctaccagctgagagccaatggagtt
ctggtatttgttccaaggtatggcgttaagggtgttgcctatctgcaggatcgcaacagt
caggtgctgtacatacccaagtcctgtccacccgagtgggtcagtggtgcgctcatccga
ggggacgatcttctcactgttgactcaacgctaggcgttcagaaatactgcctgctggag
cacattacggttcgactctcagtcaacttgtcacacgctcactgtcagtccctgaagatt
gaagttgttgccaagcgaccgcacggcagaggagacggtggcccagcagaggtgaccact
agagcagacatggttaagagagtgaagcagggggcagaggacagacaaggggatgagatg
gacacgcagtccctcctggactctctcagcccggagctgtctcagtaccgacagaccgac
cctcagcacagcctctacaatctcttccagtcattccatcacacgggcatgcagttctag
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