Littorina saxatilis: 138982634
Help
Entry
138982634 CDS
T10665
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
lsax Littorina saxatilis
Pathway
lsax03410
Base excision repair
lsax03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138982634
03450 Non-homologous end-joining
138982634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138982634
Enzymes [BR:
lsax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
138982634
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
138982634
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
138982634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
PTCB-BRCT
BRCT_2
NTP_transf_2
LIG3_BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
138982634
NCBI-ProteinID:
XP_070212060
LinkDB
All DBs
Position
LG12:complement(67832502..67847615)
Genome browser
AA seq
586 aa
AA seq
DB search
MASQKRKAEVGNDRDKSKKAKTSISRADPNSNSNSEQGYFQGLKLFILPAGIQKSRLQLF
KSQVEKYGACVKDSAAEDVTHIIVDDAMTAERMCKIMKIDTPPSDKAIVKSAWLSACFRQ
KELIDTNDFQLKIPPSASSTKSSPVSEDLKLRQNRDNANESNTAKVEHYQKLKSSPEHKF
PKVGVMWNAFKSKPKAEESEDGDSDYAASDGEVSDSSASHAASAELPTTSSADTTPNTSP
EKKVPISKWICAQSSKAPKSNANEHITAKLEEMVKNYESTNDKWRAFGYQKAIGALRKCP
HEIRSWEEARALQGVGAKLADKIWEIAQSGELRKLTEFQSSEQVQVLKLFTDVWGAGPTT
ANAWFQQGFRTLEDLKTKANLTHQQKVGVRLYEDLLDRMPREEAAEIEAVVKETAESVQP
GVIAYACGSYRRGKKDCGDVDIILTHPDGHSHKGLFGKVIQHLKDKGFLTDDLVSVEDNE
NQKKYLGVCKLPGPNRKHRRLDIIVVPYEEYACALVYFTGSAHFNRSLRHLCKKMGMSLN
EHALRKGVVRKGQEKIFEGTIVPTPTEESVMTALGVPFRPPEERDH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagaaacggaaagcggaggttggtaacgatagagataaaagcaaaaaggcg
aaaacctcaatttcaagggcagatccaaactcaaactcaaactcggagcaagggtacttt
cagggactaaaactgttcattttaccagccggaatacagaaaagccggcttcagctattc
aagtcccaagttgagaagtatggtgcctgtgtgaaagactcagccgcggaagacgtgacg
catattatcgttgatgatgcaatgacagccgagagaatgtgcaagataatgaaaatagac
acacccccttcagacaaagccatagtcaaatctgcctggctgagcgcctgctttagacaa
aaggagctaatagatacaaacgattttcaacttaagattcctccatctgctagttcaaca
aaaagttcacctgtgagtgaagatttgaagctaaggcaaaatcgtgataatgcaaacgaa
agtaacacggcaaaagtagaacattatcagaaactaaagtccagcccagaacacaaattt
cccaaagttggagtgatgtggaatgctttcaagtctaaacccaaagcagaagagtcagag
gatggagacagtgactatgcagcaagtgatggtgaagtttctgattcttctgcgagtcat
gccgcttcagctgaattgccaacaacaagttcagctgacacaacaccaaacacatcccca
gagaaaaaagtgcctatcagcaaatggatttgtgcccagtcttccaaagctcctaaaagc
aatgcaaatgaacacatcacagcaaaattagaggagatggtgaaaaattatgaaagcaca
aatgacaagtggcgggcgtttggttaccagaaagccattggagctttgcggaaatgtcca
catgaaataagaagctgggaggaggcgcgtgctctgcaaggagtgggtgccaagttggct
gacaagatttgggagattgcccaaagcggtgaactgcgcaaactgacagagttccagtct
agcgaacaggttcaagtgctgaagttgttcactgatgtgtggggagcagggcccactaca
gccaatgcctggttccagcaggggtttcgaaccctagaagatttgaagaccaaggcaaac
ctgacccaccagcagaaggtcggagttcgtctctatgaagacctgctggaccgcatgccc
agagaagaggcagcagagattgaagctgtggtgaaagaaacggcagagtcagtgcaacca
ggagtcattgcctacgcatgtgggtcatatcgccgagggaagaaagattgtggggacgtt
gatatcattctcacacaccctgacggacactcgcacaaaggactctttggaaaagttatt
caacatcttaaagataaaggttttctgactgatgacttggtttctgtggaagacaatgag
aaccagaaaaaatacttaggtgtttgcaagctgcctggacccaatagaaagcatcggcga
ctggacatcattgtggtgccatatgaggaatacgcctgtgccttggtctacttcaccggg
tcggcccattttaaccgctccttgcgccatctctgcaagaaaatgggcatgtccctgaat
gagcatgctttgaggaagggggtggtgagaaagggccaggaaaagatctttgaaggcacc
atagtaccaacaccaacggaggaatctgtgatgacagctcttggagttcccttcagaccc
cctgaggagagggatcattaa
DBGET
integrated database retrieval system
